EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000006243 (Gene tree)
Gene ID: 101107883
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 58104 bases
Position: chr13:27304914-27363017
Accession: 101107883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000006688	PRP4	PF08799.11	8.3e-14	1	1
ENSOARP00000006686	PRP4	PF08799.11	8.4e-14	1	1
ENSOARP00000006688	Prp18	PF02840.15	3.6e-63	1	1
ENSOARP00000006686	Prp18	PF02840.15	4.5e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000006792	-	1026	-	ENSOARP00000006688	341 (aa)	-	W5P8D3
ENSOART00000006790	-	1174	XM_004014235	ENSOARP00000006686	351 (aa)	XP_004014284	W5P8D1

Gene Model

Click here to download ENSOARG00000006243's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000006243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000006243	-	100	96.581	ENSG00000165630	PRPF18	100	96.581	Homo_sapiens
ENSOARG00000006243	-	100	83.191	ENSAPOG00000024177	prpf18	100	83.191	Acanthochromis_polyacanthus
ENSOARG00000006243	-	100	97.151	ENSAMEG00000013591	-	100	97.151	Ailuropoda_melanoleuca
ENSOARG00000006243	-	100	82.051	ENSACIG00000001186	prpf18	100	82.051	Amphilophus_citrinellus
ENSOARG00000006243	-	98	83.483	ENSAOCG00000006572	prpf18	94	83.090	Amphiprion_ocellaris
ENSOARG00000006243	-	100	83.476	ENSAPEG00000004564	prpf18	100	83.476	Amphiprion_percula
ENSOARG00000006243	-	99	82.647	ENSATEG00000000303	prpf18	99	82.647	Anabas_testudineus
ENSOARG00000006243	-	99	89.706	ENSAPLG00000003387	-	99	89.706	Anas_platyrhynchos
ENSOARG00000006243	-	100	90.368	ENSACAG00000000818	-	100	90.368	Anolis_carolinensis
ENSOARG00000006243	-	100	98.575	ENSANAG00000037445	-	100	98.575	Aotus_nancymaae
ENSOARG00000006243	-	100	82.051	ENSACLG00000026296	prpf18	100	82.051	Astatotilapia_calliptera
ENSOARG00000006243	-	100	83.476	ENSAMXG00000012848	prpf18	100	83.476	Astyanax_mexicanus
ENSOARG00000006243	-	100	100.000	ENSBTAG00000017244	PRPF18	100	100.000	Bos_taurus
ENSOARG00000006243	-	98	37.535	WBGene00009320	F32B6.3	97	37.535	Caenorhabditis_elegans
ENSOARG00000006243	-	100	98.575	ENSCJAG00000009432	-	100	98.575	Callithrix_jacchus
ENSOARG00000006243	-	100	97.151	ENSCAFG00000004735	-	100	97.151	Canis_familiaris
ENSOARG00000006243	-	100	97.151	ENSCAFG00020007712	-	100	97.151	Canis_lupus_dingo
ENSOARG00000006243	-	100	100.000	ENSCHIG00000000499	-	100	100.000	Capra_hircus
ENSOARG00000006243	-	100	98.291	ENSTSYG00000003517	-	100	98.291	Carlito_syrichta
ENSOARG00000006243	-	100	98.860	ENSCPOG00000021069	-	100	98.860	Cavia_porcellus
ENSOARG00000006243	-	100	98.575	ENSCCAG00000036822	-	100	98.575	Cebus_capucinus
ENSOARG00000006243	-	100	85.755	ENSCATG00000016633	-	100	85.755	Cercocebus_atys
ENSOARG00000006243	-	100	98.575	ENSCLAG00000011770	-	100	98.575	Chinchilla_lanigera
ENSOARG00000006243	-	100	99.145	ENSCSAG00000013109	-	100	99.145	Chlorocebus_sabaeus
ENSOARG00000006243	-	100	88.767	ENSCPBG00000003100	-	100	88.767	Chrysemys_picta_bellii
ENSOARG00000006243	-	99	53.235	ENSCING00000020481	-	97	53.235	Ciona_intestinalis
ENSOARG00000006243	-	99	53.276	ENSCSAVG00000010546	-	99	52.422	Ciona_savignyi
ENSOARG00000006243	-	100	98.860	ENSCANG00000034900	-	100	98.860	Colobus_angolensis_palliatus
ENSOARG00000006243	-	100	96.011	ENSCGRG00001023665	Prpf18	100	96.011	Cricetulus_griseus_chok1gshd
ENSOARG00000006243	-	100	96.011	ENSCGRG00000014690	Prpf18	100	96.011	Cricetulus_griseus_crigri
ENSOARG00000006243	-	100	81.197	ENSCSEG00000005536	prpf18	99	81.765	Cynoglossus_semilaevis
ENSOARG00000006243	-	100	82.336	ENSCVAG00000012401	prpf18	100	82.336	Cyprinodon_variegatus
ENSOARG00000006243	-	100	83.191	ENSDARG00000058306	prpf18	100	83.191	Danio_rerio
ENSOARG00000006243	-	100	96.011	ENSDNOG00000035607	-	100	96.011	Dasypus_novemcinctus
ENSOARG00000006243	-	100	96.296	ENSDORG00000000858	Prpf18	100	96.296	Dipodomys_ordii
ENSOARG00000006243	-	99	49.852	FBgn0027784	Prp18	98	49.425	Drosophila_melanogaster
ENSOARG00000006243	-	100	84.615	ENSETEG00000015060	-	100	84.615	Echinops_telfairi
ENSOARG00000006243	-	100	65.812	ENSEBUG00000016502	prpf18	99	64.957	Eptatretus_burgeri
ENSOARG00000006243	-	100	99.430	ENSEASG00005019373	-	100	99.430	Equus_asinus_asinus
ENSOARG00000006243	-	100	99.430	ENSECAG00000006997	PRPF18	100	99.430	Equus_caballus
ENSOARG00000006243	-	93	61.538	ENSEEUG00000001171	-	100	61.538	Erinaceus_europaeus
ENSOARG00000006243	-	100	80.398	ENSELUG00000022190	prpf18	100	80.398	Esox_lucius
ENSOARG00000006243	-	100	99.430	ENSFCAG00000004436	-	100	99.430	Felis_catus
ENSOARG00000006243	-	93	90.462	ENSFALG00000001912	-	97	90.462	Ficedula_albicollis
ENSOARG00000006243	-	94	98.750	ENSFDAG00000014026	-	100	98.750	Fukomys_damarensis
ENSOARG00000006243	-	99	63.429	ENSFDAG00000010713	-	97	63.429	Fukomys_damarensis
ENSOARG00000006243	-	80	89.011	ENSFHEG00000020125	prpf18	98	89.139	Fundulus_heteroclitus
ENSOARG00000006243	-	99	78.171	ENSGMOG00000012210	prpf18	99	78.171	Gadus_morhua
ENSOARG00000006243	-	100	91.168	ENSGALG00000043593	-	100	91.168	Gallus_gallus
ENSOARG00000006243	-	100	80.342	ENSGAFG00000006034	prpf18	100	80.342	Gambusia_affinis
ENSOARG00000006243	-	100	79.487	ENSGACG00000012232	prpf18	100	79.487	Gasterosteus_aculeatus
ENSOARG00000006243	-	100	91.453	ENSGAGG00000016878	-	100	91.453	Gopherus_agassizii
ENSOARG00000006243	-	93	99.077	ENSGGOG00000025188	-	96	99.077	Gorilla_gorilla
ENSOARG00000006243	-	100	82.621	ENSHBUG00000010264	prpf18	100	82.621	Haplochromis_burtoni
ENSOARG00000006243	-	100	96.581	ENSHGLG00000018534	PRPF18	100	96.581	Heterocephalus_glaber_female
ENSOARG00000006243	-	94	99.065	ENSHGLG00100012161	-	98	99.065	Heterocephalus_glaber_male
ENSOARG00000006243	-	100	82.051	ENSHCOG00000015987	prpf18	100	82.051	Hippocampus_comes
ENSOARG00000006243	-	100	81.586	ENSIPUG00000007432	prpf18	100	82.436	Ictalurus_punctatus
ENSOARG00000006243	-	100	97.151	ENSSTOG00000008735	-	100	97.151	Ictidomys_tridecemlineatus
ENSOARG00000006243	-	100	70.225	ENSJJAG00000015191	-	100	70.225	Jaculus_jaculus
ENSOARG00000006243	-	100	96.581	ENSJJAG00000024041	-	100	96.581	Jaculus_jaculus
ENSOARG00000006243	-	100	81.197	ENSKMAG00000012124	prpf18	100	81.197	Kryptolebias_marmoratus
ENSOARG00000006243	-	94	86.250	ENSLBEG00000028466	prpf18	94	86.250	Labrus_bergylta
ENSOARG00000006243	-	100	84.615	ENSLACG00000009885	prpf18	100	84.615	Latimeria_chalumnae
ENSOARG00000006243	-	100	88.889	ENSLOCG00000016736	prpf18	100	88.889	Lepisosteus_oculatus
ENSOARG00000006243	-	100	96.581	ENSLAFG00000007753	-	100	96.581	Loxodonta_africana
ENSOARG00000006243	-	100	99.145	ENSMFAG00000000540	-	100	99.145	Macaca_fascicularis
ENSOARG00000006243	-	100	99.145	ENSMMUG00000015071	PRPF18	100	99.145	Macaca_mulatta
ENSOARG00000006243	-	100	99.145	ENSMNEG00000024679	-	100	99.145	Macaca_nemestrina
ENSOARG00000006243	-	100	81.766	ENSMLEG00000031715	-	100	81.766	Mandrillus_leucophaeus
ENSOARG00000006243	-	100	81.481	ENSMAMG00000006610	prpf18	100	81.481	Mastacembelus_armatus
ENSOARG00000006243	-	100	82.621	ENSMZEG00005019392	prpf18	100	82.621	Maylandia_zebra
ENSOARG00000006243	-	100	89.174	ENSMGAG00000005023	-	100	89.174	Meleagris_gallopavo
ENSOARG00000006243	-	100	98.860	ENSMICG00000006572	-	100	98.860	Microcebus_murinus
ENSOARG00000006243	-	100	96.581	ENSMOCG00000021468	Prpf18	100	96.581	Microtus_ochrogaster
ENSOARG00000006243	-	100	80.627	ENSMMOG00000013012	prpf18	100	80.627	Mola_mola
ENSOARG00000006243	-	96	92.308	ENSMODG00000016902	-	92	92.308	Monodelphis_domestica
ENSOARG00000006243	-	100	83.191	ENSMODG00000024043	-	100	83.191	Monodelphis_domestica
ENSOARG00000006243	-	100	77.183	ENSMALG00000005486	prpf18	100	77.465	Monopterus_albus
ENSOARG00000006243	-	100	96.011	MGP_CAROLIEiJ_G0023143	Prpf18	100	98.630	Mus_caroli
ENSOARG00000006243	-	100	95.726	ENSMUSG00000039449	Prpf18	100	98.630	Mus_musculus
ENSOARG00000006243	-	100	96.296	MGP_PahariEiJ_G0019203	Prpf18	100	98.630	Mus_pahari
ENSOARG00000006243	-	100	95.442	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSOARG00000006243	-	100	96.866	ENSMPUG00000000938	-	100	96.866	Mustela_putorius_furo
ENSOARG00000006243	-	100	96.296	ENSMLUG00000009200	-	100	96.296	Myotis_lucifugus
ENSOARG00000006243	-	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSOARG00000006243	-	100	96.011	ENSNGAG00000012500	-	100	96.011	Nannospalax_galili
ENSOARG00000006243	-	100	82.051	ENSNBRG00000001778	prpf18	100	82.051	Neolamprologus_brichardi
ENSOARG00000006243	-	100	99.145	ENSNLEG00000012186	-	100	99.145	Nomascus_leucogenys
ENSOARG00000006243	-	76	79.537	ENSMEUG00000005032	-	75	79.537	Notamacropus_eugenii
ENSOARG00000006243	-	78	77.737	ENSOPRG00000002153	-	100	77.737	Ochotona_princeps
ENSOARG00000006243	-	100	95.726	ENSODEG00000003770	-	100	95.726	Octodon_degus
ENSOARG00000006243	-	98	81.982	ENSONIG00000014854	prpf18	96	81.395	Oreochromis_niloticus
ENSOARG00000006243	-	100	93.732	ENSOANG00000015404	-	100	93.732	Ornithorhynchus_anatinus
ENSOARG00000006243	-	100	96.866	ENSOCUG00000027756	-	98	96.119	Oryctolagus_cuniculus
ENSOARG00000006243	-	100	82.336	ENSORLG00000010293	prpf18	100	82.336	Oryzias_latipes
ENSOARG00000006243	-	100	82.336	ENSORLG00020001530	prpf18	100	82.336	Oryzias_latipes_hni
ENSOARG00000006243	-	100	82.621	ENSORLG00015013705	prpf18	100	82.621	Oryzias_latipes_hsok
ENSOARG00000006243	-	100	82.621	ENSOMEG00000009167	prpf18	100	82.621	Oryzias_melastigma
ENSOARG00000006243	-	100	96.011	ENSOGAG00000007294	-	100	96.011	Otolemur_garnettii
ENSOARG00000006243	-	100	99.145	ENSPPAG00000041959	-	100	99.145	Pan_paniscus
ENSOARG00000006243	-	100	96.866	ENSPPRG00000000107	-	100	96.866	Panthera_pardus
ENSOARG00000006243	-	100	96.581	ENSPTIG00000021094	-	100	96.581	Panthera_tigris_altaica
ENSOARG00000006243	-	100	99.145	ENSPTRG00000002306	PRPF18	100	99.145	Pan_troglodytes
ENSOARG00000006243	-	100	98.860	ENSPANG00000023346	-	100	98.860	Papio_anubis
ENSOARG00000006243	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.336	Paramormyrops_kingsleyae
ENSOARG00000006243	-	100	89.744	ENSPSIG00000016064	-	100	89.744	Pelodiscus_sinensis
ENSOARG00000006243	-	100	76.353	ENSPMGG00000016486	prpf18	100	76.353	Periophthalmus_magnuspinnatus
ENSOARG00000006243	-	100	96.296	ENSPEMG00000013704	Prpf18	100	96.296	Peromyscus_maniculatus_bairdii
ENSOARG00000006243	-	100	73.219	ENSPMAG00000000204	prpf18	100	73.219	Petromyzon_marinus
ENSOARG00000006243	-	93	95.692	ENSPCIG00000012963	-	99	95.692	Phascolarctos_cinereus
ENSOARG00000006243	-	100	81.481	ENSPFOG00000017611	prpf18	100	81.481	Poecilia_formosa
ENSOARG00000006243	-	100	80.912	ENSPLAG00000000369	prpf18	100	80.912	Poecilia_latipinna
ENSOARG00000006243	-	100	81.481	ENSPMEG00000005183	prpf18	100	81.481	Poecilia_mexicana
ENSOARG00000006243	-	100	80.342	ENSPREG00000015232	prpf18	100	80.342	Poecilia_reticulata
ENSOARG00000006243	-	100	96.296	ENSPPYG00000002101	PRPF18	100	96.296	Pongo_abelii
ENSOARG00000006243	-	100	78.063	ENSPCAG00000010833	-	100	78.063	Procavia_capensis
ENSOARG00000006243	-	100	89.174	ENSPCOG00000013057	-	93	99.320	Propithecus_coquereli
ENSOARG00000006243	-	100	60.114	ENSPVAG00000002947	-	100	60.114	Pteropus_vampyrus
ENSOARG00000006243	-	100	82.621	ENSPNYG00000003554	prpf18	100	82.621	Pundamilia_nyererei
ENSOARG00000006243	-	100	84.615	ENSPNAG00000023151	prpf18	100	84.615	Pygocentrus_nattereri
ENSOARG00000006243	-	100	95.442	ENSRNOG00000018396	Prpf18	100	95.442	Rattus_norvegicus
ENSOARG00000006243	-	100	98.575	ENSRBIG00000028028	-	100	98.575	Rhinopithecus_bieti
ENSOARG00000006243	-	100	98.860	ENSRROG00000040695	-	100	98.860	Rhinopithecus_roxellana
ENSOARG00000006243	-	100	98.575	ENSSBOG00000034482	-	100	98.575	Saimiri_boliviensis_boliviensis
ENSOARG00000006243	-	100	74.929	ENSSHAG00000009669	-	100	74.929	Sarcophilus_harrisii
ENSOARG00000006243	-	100	93.447	ENSSHAG00000016463	-	100	93.447	Sarcophilus_harrisii
ENSOARG00000006243	-	78	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSOARG00000006243	-	98	82.899	ENSSFOG00015022118	prpf18	100	75.000	Scleropages_formosus
ENSOARG00000006243	-	100	80.912	ENSSMAG00000005308	prpf18	100	80.912	Scophthalmus_maximus
ENSOARG00000006243	-	100	82.906	ENSSDUG00000015428	prpf18	100	82.906	Seriola_dumerili
ENSOARG00000006243	-	100	82.906	ENSSLDG00000023989	prpf18	100	82.906	Seriola_lalandi_dorsalis
ENSOARG00000006243	-	100	67.236	ENSSARG00000005307	-	100	67.236	Sorex_araneus
ENSOARG00000006243	-	100	89.459	ENSSPUG00000002619	-	100	89.459	Sphenodon_punctatus
ENSOARG00000006243	-	100	82.336	ENSSPAG00000019502	prpf18	100	82.336	Stegastes_partitus
ENSOARG00000006243	-	100	99.715	ENSSSCG00000026354	-	100	99.715	Sus_scrofa
ENSOARG00000006243	-	100	89.174	ENSTGUG00000002286	-	100	89.174	Taeniopygia_guttata
ENSOARG00000006243	-	100	79.772	ENSTRUG00000011278	prpf18	100	79.772	Takifugu_rubripes
ENSOARG00000006243	-	99	80.294	ENSTNIG00000000911	prpf18	99	80.294	Tetraodon_nigroviridis
ENSOARG00000006243	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSOARG00000006243	-	100	96.296	ENSTTRG00000011117	PRPF18	100	96.296	Tursiops_truncatus
ENSOARG00000006243	-	91	99.678	ENSUAMG00000001815	-	93	99.678	Ursus_americanus
ENSOARG00000006243	-	100	92.308	ENSUMAG00000012329	-	100	92.308	Ursus_maritimus
ENSOARG00000006243	-	100	91.168	ENSVPAG00000011486	-	100	91.168	Vicugna_pacos
ENSOARG00000006243	-	100	99.715	ENSVVUG00000005453	-	100	99.715	Vulpes_vulpes
ENSOARG00000006243	-	100	78.531	ENSXETG00000024057	prpf18	100	78.531	Xenopus_tropicalis
ENSOARG00000006243	-	100	80.170	ENSXCOG00000020414	prpf18	100	80.170	Xiphophorus_couchianus
ENSOARG00000006243	-	100	81.197	ENSXMAG00000004713	prpf18	91	81.197	Xiphophorus_maculatus