EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000006453 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 26946 bases
Position: chr2:241155977-241182922
Accession: 101116288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000006906	PWI	PF01480.17	4.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000007011	SRRM1-201	2559	-	ENSOARP00000006906	852 (aa)	-	W5P8Z8

Gene Model

Click here to download ENSOARG00000006453's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03013	RNA transport	KEGG
oas03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000006453's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000006453	SRRM1	99	97.406	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSOARG00000006453	SRRM1	99	97.406	ENSAMEG00000010075	SRRM1	92	97.406	Ailuropoda_melanoleuca
ENSOARG00000006453	SRRM1	52	69.495	ENSAPLG00000002066	SRRM1	51	80.215	Anas_platyrhynchos
ENSOARG00000006453	SRRM1	99	97.759	ENSANAG00000035606	SRRM1	92	97.759	Aotus_nancymaae
ENSOARG00000006453	SRRM1	99	99.408	ENSBTAG00000013772	SRRM1	94	99.172	Bos_taurus
ENSOARG00000006453	SRRM1	99	96.816	ENSCJAG00000020822	SRRM1	92	96.816	Callithrix_jacchus
ENSOARG00000006453	SRRM1	99	96.462	ENSCAFG00020020948	SRRM1	99	96.314	Canis_lupus_dingo
ENSOARG00000006453	SRRM1	99	98.113	ENSCHIG00000014656	SRRM1	92	98.113	Capra_hircus
ENSOARG00000006453	SRRM1	99	97.052	ENSTSYG00000006782	SRRM1	92	97.052	Carlito_syrichta
ENSOARG00000006453	SRRM1	98	94.869	ENSCAPG00000011473	SRRM1	92	94.869	Cavia_aperea
ENSOARG00000006453	SRRM1	99	95.976	ENSCPOG00000015594	SRRM1	92	95.976	Cavia_porcellus
ENSOARG00000006453	SRRM1	99	97.288	ENSCCAG00000029474	SRRM1	96	97.972	Cebus_capucinus
ENSOARG00000006453	SRRM1	99	96.805	ENSCLAG00000014592	SRRM1	92	96.805	Chinchilla_lanigera
ENSOARG00000006453	SRRM1	66	96.111	ENSCHOG00000000027	SRRM1	62	96.111	Choloepus_hoffmanni
ENSOARG00000006453	SRRM1	99	95.972	ENSCGRG00001014174	Srrm1	96	95.972	Cricetulus_griseus_chok1gshd
ENSOARG00000006453	SRRM1	98	96.200	ENSCGRG00000017603	Srrm1	92	96.200	Cricetulus_griseus_crigri
ENSOARG00000006453	SRRM1	99	93.396	ENSDNOG00000049141	SRRM1	94	93.396	Dasypus_novemcinctus
ENSOARG00000006453	SRRM1	99	97.639	ENSEASG00005004270	SRRM1	93	97.639	Equus_asinus_asinus
ENSOARG00000006453	SRRM1	99	97.757	ENSECAG00000026981	SRRM1	95	96.104	Equus_caballus
ENSOARG00000006453	SRRM1	99	97.406	ENSFCAG00000000678	-	92	97.406	Felis_catus
ENSOARG00000006453	SRRM1	99	97.396	ENSFDAG00000009903	SRRM1	92	97.396	Fukomys_damarensis
ENSOARG00000006453	SRRM1	99	97.406	ENSGGOG00000005209	SRRM1	92	97.406	Gorilla_gorilla
ENSOARG00000006453	SRRM1	99	97.515	ENSHGLG00000017105	SRRM1	92	97.515	Heterocephalus_glaber_female
ENSOARG00000006453	SRRM1	99	95.482	ENSHGLG00100016772	SRRM1	92	95.482	Heterocephalus_glaber_male
ENSOARG00000006453	SRRM1	99	97.759	ENSSTOG00000014640	SRRM1	92	97.759	Ictidomys_tridecemlineatus
ENSOARG00000006453	SRRM1	99	94.431	ENSJJAG00000018643	Srrm1	97	94.431	Jaculus_jaculus
ENSOARG00000006453	SRRM1	99	94.719	ENSLAFG00000013830	SRRM1	93	94.719	Loxodonta_africana
ENSOARG00000006453	SRRM1	57	97.546	ENSMFAG00000025726	SRRM1	92	97.759	Macaca_fascicularis
ENSOARG00000006453	SRRM1	99	97.759	ENSMICG00000006553	SRRM1	92	97.759	Microcebus_murinus
ENSOARG00000006453	SRRM1	99	94.718	MGP_CAROLIEiJ_G0026636	Srrm1	95	96.244	Mus_caroli
ENSOARG00000006453	SRRM1	99	94.601	ENSMUSG00000028809	Srrm1	95	96.127	Mus_musculus
ENSOARG00000006453	SRRM1	99	96.357	MGP_PahariEiJ_G0028969	Srrm1	95	96.357	Mus_pahari
ENSOARG00000006453	SRRM1	99	94.836	MGP_SPRETEiJ_G0027616	Srrm1	95	96.362	Mus_spretus
ENSOARG00000006453	SRRM1	99	94.953	ENSNGAG00000014562	Srrm1	92	96.479	Nannospalax_galili
ENSOARG00000006453	SRRM1	99	97.406	ENSNLEG00000008966	SRRM1	95	97.405	Nomascus_leucogenys
ENSOARG00000006453	SRRM1	99	96.927	ENSOCUG00000008438	SRRM1	92	96.927	Oryctolagus_cuniculus
ENSOARG00000006453	SRRM1	99	97.288	ENSOGAG00000010210	SRRM1	92	97.288	Otolemur_garnettii
ENSOARG00000006453	SRRM1	99	97.288	ENSPPAG00000043918	SRRM1	92	97.288	Pan_paniscus
ENSOARG00000006453	SRRM1	99	97.406	ENSPPRG00000002509	SRRM1	92	97.406	Panthera_pardus
ENSOARG00000006453	SRRM1	99	97.995	ENSPTRG00000000349	SRRM1	92	97.995	Pan_troglodytes
ENSOARG00000006453	SRRM1	99	96.357	ENSPEMG00000006254	Srrm1	92	96.357	Peromyscus_maniculatus_bairdii
ENSOARG00000006453	SRRM1	99	97.288	ENSPPYG00000001716	SRRM1	92	97.288	Pongo_abelii
ENSOARG00000006453	SRRM1	90	84.525	ENSPCAG00000015138	SRRM1	84	84.525	Procavia_capensis
ENSOARG00000006453	SRRM1	99	96.820	ENSPCOG00000021311	SRRM1	92	96.820	Propithecus_coquereli
ENSOARG00000006453	SRRM1	99	97.052	ENSPVAG00000005836	SRRM1	92	97.052	Pteropus_vampyrus
ENSOARG00000006453	SRRM1	99	96.122	ENSRNOG00000018194	Srrm1	93	96.122	Rattus_norvegicus
ENSOARG00000006453	SRRM1	57	97.342	ENSRROG00000035151	SRRM1	92	97.052	Rhinopithecus_roxellana
ENSOARG00000006453	SRRM1	99	96.816	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSOARG00000006453	SRRM1	55	94.643	ENSSARG00000013718	SRRM1	53	94.643	Sorex_araneus
ENSOARG00000006453	SRRM1	98	97.979	ENSSSCG00000032947	SRRM1	95	97.899	Sus_scrofa
ENSOARG00000006453	SRRM1	99	97.281	ENSTBEG00000000100	SRRM1	92	97.281	Tupaia_belangeri
ENSOARG00000006453	SRRM1	98	96.908	ENSTTRG00000009365	SRRM1	92	96.908	Tursiops_truncatus
ENSOARG00000006453	SRRM1	95	96.292	ENSUMAG00000013121	SRRM1	94	96.292	Ursus_maritimus
ENSOARG00000006453	SRRM1	95	95.320	ENSVPAG00000007698	SRRM1	92	95.320	Vicugna_pacos
ENSOARG00000006453	SRRM1	98	95.471	ENSVVUG00000026966	SRRM1	91	95.471	Vulpes_vulpes