EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000006849 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 18194 bases
Position: chr17:68884031-68902224
Accession: 101110452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000007338	PRP21_like_P	PF12230.8	2.3e-48	1	1
ENSOARP00000007338	Surp	PF01805.20	5.1e-46	1	2
ENSOARP00000007338	Surp	PF01805.20	5.1e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000007449	SF3A1-201	2358	XM_004017473	ENSOARP00000007338	785 (aa)	XP_004017522	W5PA79

Gene Model

Click here to download ENSOARG00000006849's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000006849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000006849	SF3A1	100	96.974	ENSG00000099995	SF3A1	100	96.974	Homo_sapiens
ENSOARG00000006849	SF3A1	100	82.138	ENSAPOG00000020465	sf3a1	99	83.632	Acanthochromis_polyacanthus
ENSOARG00000006849	SF3A1	100	96.981	ENSAMEG00000007737	SF3A1	100	96.981	Ailuropoda_melanoleuca
ENSOARG00000006849	SF3A1	100	82.390	ENSACIG00000020672	sf3a1	99	83.504	Amphilophus_citrinellus
ENSOARG00000006849	SF3A1	100	81.875	ENSAOCG00000003060	sf3a1	99	83.632	Amphiprion_ocellaris
ENSOARG00000006849	SF3A1	100	82.000	ENSAPEG00000010735	sf3a1	99	83.760	Amphiprion_percula
ENSOARG00000006849	SF3A1	96	84.505	ENSATEG00000021201	sf3a1	98	83.933	Anabas_testudineus
ENSOARG00000006849	SF3A1	95	91.810	ENSAPLG00000009057	SF3A1	99	91.097	Anas_platyrhynchos
ENSOARG00000006849	SF3A1	100	84.483	ENSACAG00000009415	SF3A1	100	85.345	Anolis_carolinensis
ENSOARG00000006849	SF3A1	100	97.100	ENSANAG00000032045	SF3A1	100	97.100	Aotus_nancymaae
ENSOARG00000006849	SF3A1	100	82.728	ENSACLG00000012622	sf3a1	99	84.251	Astatotilapia_calliptera
ENSOARG00000006849	SF3A1	99	81.496	ENSAMXG00000005382	sf3a1	99	83.097	Astyanax_mexicanus
ENSOARG00000006849	SF3A1	100	98.108	ENSBTAG00000003390	SF3A1	100	98.108	Bos_taurus
ENSOARG00000006849	SF3A1	85	43.088	WBGene00004188	prp-21	94	42.287	Caenorhabditis_elegans
ENSOARG00000006849	SF3A1	100	97.226	ENSCJAG00000010370	SF3A1	100	97.226	Callithrix_jacchus
ENSOARG00000006849	SF3A1	100	97.604	ENSCAFG00000012559	SF3A1	100	97.604	Canis_familiaris
ENSOARG00000006849	SF3A1	100	97.604	ENSCAFG00020000838	SF3A1	100	97.604	Canis_lupus_dingo
ENSOARG00000006849	SF3A1	100	98.235	ENSCHIG00000018642	SF3A1	100	98.235	Capra_hircus
ENSOARG00000006849	SF3A1	100	97.478	ENSTSYG00000004739	SF3A1	100	97.478	Carlito_syrichta
ENSOARG00000006849	SF3A1	94	79.172	ENSCAPG00000015414	SF3A1	98	79.172	Cavia_aperea
ENSOARG00000006849	SF3A1	100	97.352	ENSCPOG00000014589	SF3A1	100	97.352	Cavia_porcellus
ENSOARG00000006849	SF3A1	100	97.100	ENSCCAG00000032006	SF3A1	100	97.100	Cebus_capucinus
ENSOARG00000006849	SF3A1	100	97.352	ENSCATG00000029241	SF3A1	100	97.352	Cercocebus_atys
ENSOARG00000006849	SF3A1	100	96.721	ENSCLAG00000006508	SF3A1	100	96.721	Chinchilla_lanigera
ENSOARG00000006849	SF3A1	100	97.226	ENSCSAG00000009470	SF3A1	100	97.226	Chlorocebus_sabaeus
ENSOARG00000006849	SF3A1	61	98.893	ENSCHOG00000005201	SF3A1	69	98.893	Choloepus_hoffmanni
ENSOARG00000006849	SF3A1	100	90.668	ENSCPBG00000007595	SF3A1	100	91.299	Chrysemys_picta_bellii
ENSOARG00000006849	SF3A1	94	52.122	ENSCING00000008526	-	66	57.663	Ciona_intestinalis
ENSOARG00000006849	SF3A1	84	67.391	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSOARG00000006849	SF3A1	100	97.226	ENSCANG00000033564	SF3A1	100	97.226	Colobus_angolensis_palliatus
ENSOARG00000006849	SF3A1	100	96.721	ENSCGRG00001008933	Sf3a1	100	96.721	Cricetulus_griseus_chok1gshd
ENSOARG00000006849	SF3A1	100	96.721	ENSCGRG00000006127	Sf3a1	100	96.721	Cricetulus_griseus_crigri
ENSOARG00000006849	SF3A1	99	81.576	ENSCSEG00000010792	sf3a1	99	82.028	Cynoglossus_semilaevis
ENSOARG00000006849	SF3A1	100	81.887	ENSCVAG00000004560	sf3a1	98	83.073	Cyprinodon_variegatus
ENSOARG00000006849	SF3A1	100	81.281	ENSDARG00000041887	sf3a1	97	83.703	Danio_rerio
ENSOARG00000006849	SF3A1	100	97.233	ENSDNOG00000010629	SF3A1	100	97.233	Dasypus_novemcinctus
ENSOARG00000006849	SF3A1	100	97.352	ENSDORG00000005613	Sf3a1	100	97.352	Dipodomys_ordii
ENSOARG00000006849	SF3A1	82	61.205	FBgn0266917	Sf3a1	85	59.025	Drosophila_melanogaster
ENSOARG00000006849	SF3A1	84	94.611	ENSETEG00000017194	SF3A1	100	92.450	Echinops_telfairi
ENSOARG00000006849	SF3A1	100	65.053	ENSEBUG00000001285	sf3a1	96	67.162	Eptatretus_burgeri
ENSOARG00000006849	SF3A1	100	97.730	ENSEASG00005010254	SF3A1	100	97.730	Equus_asinus_asinus
ENSOARG00000006849	SF3A1	100	97.730	ENSECAG00000023962	SF3A1	100	97.730	Equus_caballus
ENSOARG00000006849	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSOARG00000006849	SF3A1	100	80.952	ENSELUG00000022578	sf3a1	98	81.667	Esox_lucius
ENSOARG00000006849	SF3A1	100	97.604	ENSFCAG00000011932	SF3A1	100	97.604	Felis_catus
ENSOARG00000006849	SF3A1	95	90.993	ENSFALG00000006944	SF3A1	100	89.798	Ficedula_albicollis
ENSOARG00000006849	SF3A1	100	97.100	ENSFDAG00000009560	SF3A1	100	97.100	Fukomys_damarensis
ENSOARG00000006849	SF3A1	100	82.642	ENSFHEG00000010866	sf3a1	98	84.245	Fundulus_heteroclitus
ENSOARG00000006849	SF3A1	100	80.556	ENSGMOG00000016024	sf3a1	99	79.923	Gadus_morhua
ENSOARG00000006849	SF3A1	95	91.799	ENSGALG00000007937	SF3A1	100	90.302	Gallus_gallus
ENSOARG00000006849	SF3A1	100	81.887	ENSGAFG00000009111	sf3a1	97	83.529	Gambusia_affinis
ENSOARG00000006849	SF3A1	100	80.982	ENSGACG00000011893	sf3a1	97	82.330	Gasterosteus_aculeatus
ENSOARG00000006849	SF3A1	96	90.789	ENSGAGG00000000762	SF3A1	99	91.447	Gopherus_agassizii
ENSOARG00000006849	SF3A1	100	96.974	ENSGGOG00000012631	SF3A1	100	96.974	Gorilla_gorilla
ENSOARG00000006849	SF3A1	100	82.728	ENSHBUG00000015795	sf3a1	99	84.251	Haplochromis_burtoni
ENSOARG00000006849	SF3A1	100	97.352	ENSHGLG00000007907	SF3A1	100	97.352	Heterocephalus_glaber_female
ENSOARG00000006849	SF3A1	100	97.352	ENSHGLG00100013799	SF3A1	100	97.352	Heterocephalus_glaber_male
ENSOARG00000006849	SF3A1	100	79.623	ENSHCOG00000015423	sf3a1	99	79.355	Hippocampus_comes
ENSOARG00000006849	SF3A1	96	81.120	ENSIPUG00000002470	sf3a1	98	81.510	Ictalurus_punctatus
ENSOARG00000006849	SF3A1	100	97.478	ENSSTOG00000013892	SF3A1	100	97.478	Ictidomys_tridecemlineatus
ENSOARG00000006849	SF3A1	100	97.103	ENSJJAG00000022566	Sf3a1	100	97.103	Jaculus_jaculus
ENSOARG00000006849	SF3A1	100	81.761	ENSKMAG00000002400	sf3a1	98	83.594	Kryptolebias_marmoratus
ENSOARG00000006849	SF3A1	100	81.258	ENSLBEG00000022974	sf3a1	99	81.935	Labrus_bergylta
ENSOARG00000006849	SF3A1	100	83.940	ENSLACG00000003565	SF3A1	97	86.458	Latimeria_chalumnae
ENSOARG00000006849	SF3A1	100	84.211	ENSLOCG00000008251	sf3a1	97	86.104	Lepisosteus_oculatus
ENSOARG00000006849	SF3A1	98	61.637	ENSLAFG00000026032	-	98	61.509	Loxodonta_africana
ENSOARG00000006849	SF3A1	100	96.974	ENSLAFG00000000448	SF3A1	100	96.974	Loxodonta_africana
ENSOARG00000006849	SF3A1	100	97.100	ENSMFAG00000031979	SF3A1	100	97.100	Macaca_fascicularis
ENSOARG00000006849	SF3A1	100	97.100	ENSMMUG00000005547	SF3A1	100	97.100	Macaca_mulatta
ENSOARG00000006849	SF3A1	100	96.974	ENSMNEG00000037229	SF3A1	100	96.974	Macaca_nemestrina
ENSOARG00000006849	SF3A1	100	97.226	ENSMLEG00000041908	SF3A1	100	97.226	Mandrillus_leucophaeus
ENSOARG00000006849	SF3A1	97	84.347	ENSMAMG00000006460	sf3a1	97	84.605	Mastacembelus_armatus
ENSOARG00000006849	SF3A1	100	82.728	ENSMZEG00005009633	sf3a1	99	84.251	Maylandia_zebra
ENSOARG00000006849	SF3A1	95	91.799	ENSMGAG00000001330	SF3A1	99	91.085	Meleagris_gallopavo
ENSOARG00000006849	SF3A1	92	92.760	ENSMAUG00000020317	Sf3a1	94	92.760	Mesocricetus_auratus
ENSOARG00000006849	SF3A1	100	97.100	ENSMICG00000010038	SF3A1	100	97.100	Microcebus_murinus
ENSOARG00000006849	SF3A1	100	96.847	ENSMOCG00000008438	Sf3a1	100	96.847	Microtus_ochrogaster
ENSOARG00000006849	SF3A1	100	80.126	ENSMMOG00000015588	sf3a1	98	80.695	Mola_mola
ENSOARG00000006849	SF3A1	100	96.469	ENSMODG00000009270	SF3A1	100	96.469	Monodelphis_domestica
ENSOARG00000006849	SF3A1	100	82.746	ENSMALG00000000148	sf3a1	99	84.741	Monopterus_albus
ENSOARG00000006849	SF3A1	100	96.343	MGP_CAROLIEiJ_G0016029	Sf3a1	100	96.343	Mus_caroli
ENSOARG00000006849	SF3A1	100	96.343	ENSMUSG00000002129	Sf3a1	100	96.343	Mus_musculus
ENSOARG00000006849	SF3A1	100	96.217	MGP_PahariEiJ_G0016862	Sf3a1	100	96.217	Mus_pahari
ENSOARG00000006849	SF3A1	100	96.343	MGP_SPRETEiJ_G0016870	Sf3a1	100	96.343	Mus_spretus
ENSOARG00000006849	SF3A1	100	97.352	ENSMPUG00000013144	SF3A1	100	97.352	Mustela_putorius_furo
ENSOARG00000006849	SF3A1	100	97.478	ENSMLUG00000002139	SF3A1	100	97.478	Myotis_lucifugus
ENSOARG00000006849	SF3A1	100	97.100	ENSNGAG00000016977	Sf3a1	100	97.100	Nannospalax_galili
ENSOARG00000006849	SF3A1	100	82.147	ENSNBRG00000016642	sf3a1	96	85.639	Neolamprologus_brichardi
ENSOARG00000006849	SF3A1	100	97.226	ENSNLEG00000003686	SF3A1	100	97.226	Nomascus_leucogenys
ENSOARG00000006849	SF3A1	96	85.921	ENSMEUG00000008741	SF3A1	100	85.921	Notamacropus_eugenii
ENSOARG00000006849	SF3A1	100	96.469	ENSOPRG00000016636	SF3A1	100	96.469	Ochotona_princeps
ENSOARG00000006849	SF3A1	100	96.974	ENSODEG00000002571	SF3A1	100	96.974	Octodon_degus
ENSOARG00000006849	SF3A1	100	81.000	ENSONIG00000010848	sf3a1	99	83.504	Oreochromis_niloticus
ENSOARG00000006849	SF3A1	100	97.100	ENSOCUG00000007633	SF3A1	100	97.100	Oryctolagus_cuniculus
ENSOARG00000006849	SF3A1	96	80.709	ENSORLG00000013050	sf3a1	99	82.377	Oryzias_latipes
ENSOARG00000006849	SF3A1	96	81.496	ENSORLG00020003236	sf3a1	94	82.510	Oryzias_latipes_hni
ENSOARG00000006849	SF3A1	100	81.006	ENSORLG00015017411	sf3a1	99	82.710	Oryzias_latipes_hsok
ENSOARG00000006849	SF3A1	100	81.509	ENSOMEG00000013362	sf3a1	99	82.323	Oryzias_melastigma
ENSOARG00000006849	SF3A1	100	96.974	ENSOGAG00000012931	SF3A1	100	96.974	Otolemur_garnettii
ENSOARG00000006849	SF3A1	100	95.965	ENSPPAG00000041790	SF3A1	100	95.965	Pan_paniscus
ENSOARG00000006849	SF3A1	100	97.604	ENSPPRG00000004391	SF3A1	100	97.604	Panthera_pardus
ENSOARG00000006849	SF3A1	97	97.409	ENSPTIG00000000844	SF3A1	100	97.409	Panthera_tigris_altaica
ENSOARG00000006849	SF3A1	100	96.974	ENSPTRG00000014240	SF3A1	100	96.974	Pan_troglodytes
ENSOARG00000006849	SF3A1	100	97.226	ENSPANG00000020772	SF3A1	100	97.226	Papio_anubis
ENSOARG00000006849	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSOARG00000006849	SF3A1	96	83.706	ENSPMGG00000023096	sf3a1	100	83.333	Periophthalmus_magnuspinnatus
ENSOARG00000006849	SF3A1	100	96.974	ENSPEMG00000009494	Sf3a1	100	96.974	Peromyscus_maniculatus_bairdii
ENSOARG00000006849	SF3A1	69	77.495	ENSPMAG00000007139	-	90	77.196	Petromyzon_marinus
ENSOARG00000006849	SF3A1	100	95.965	ENSPCIG00000022692	SF3A1	100	95.965	Phascolarctos_cinereus
ENSOARG00000006849	SF3A1	100	73.995	ENSPFOG00000016768	sf3a1	93	77.551	Poecilia_formosa
ENSOARG00000006849	SF3A1	100	82.286	ENSPLAG00000017268	sf3a1	97	83.791	Poecilia_latipinna
ENSOARG00000006849	SF3A1	83	84.488	ENSPMEG00000019811	sf3a1	98	83.735	Poecilia_mexicana
ENSOARG00000006849	SF3A1	100	82.161	ENSPREG00000010347	sf3a1	97	83.922	Poecilia_reticulata
ENSOARG00000006849	SF3A1	100	97.226	ENSPPYG00000011707	SF3A1	100	97.226	Pongo_abelii
ENSOARG00000006849	SF3A1	57	97.095	ENSPCAG00000003266	SF3A1	57	97.095	Procavia_capensis
ENSOARG00000006849	SF3A1	100	97.352	ENSPCOG00000026630	SF3A1	100	97.352	Propithecus_coquereli
ENSOARG00000006849	SF3A1	100	92.686	ENSPVAG00000017719	SF3A1	94	96.107	Pteropus_vampyrus
ENSOARG00000006849	SF3A1	100	82.728	ENSPNYG00000018706	sf3a1	99	84.251	Pundamilia_nyererei
ENSOARG00000006849	SF3A1	97	82.927	ENSPNAG00000003721	sf3a1	99	83.440	Pygocentrus_nattereri
ENSOARG00000006849	SF3A1	100	96.343	ENSRNOG00000005218	Sf3a1	100	96.343	Rattus_norvegicus
ENSOARG00000006849	SF3A1	100	97.100	ENSRBIG00000032167	SF3A1	100	97.100	Rhinopithecus_bieti
ENSOARG00000006849	SF3A1	100	97.100	ENSRROG00000044908	SF3A1	100	97.100	Rhinopithecus_roxellana
ENSOARG00000006849	SF3A1	97	92.765	ENSSBOG00000021960	SF3A1	100	97.046	Saimiri_boliviensis_boliviensis
ENSOARG00000006849	SF3A1	97	93.273	ENSSHAG00000003666	SF3A1	98	93.402	Sarcophilus_harrisii
ENSOARG00000006849	SF3A1	100	82.375	ENSSFOG00015004579	sf3a1	99	83.974	Scleropages_formosus
ENSOARG00000006849	SF3A1	100	81.084	ENSSMAG00000004275	sf3a1	97	83.246	Scophthalmus_maximus
ENSOARG00000006849	SF3A1	100	82.516	ENSSDUG00000022219	sf3a1	99	83.376	Seriola_dumerili
ENSOARG00000006849	SF3A1	100	82.516	ENSSLDG00000012642	sf3a1	99	83.376	Seriola_lalandi_dorsalis
ENSOARG00000006849	SF3A1	97	93.653	ENSSARG00000005960	SF3A1	100	93.653	Sorex_araneus
ENSOARG00000006849	SF3A1	96	90.285	ENSSPUG00000018863	SF3A1	100	89.677	Sphenodon_punctatus
ENSOARG00000006849	SF3A1	100	83.145	ENSSPAG00000011856	sf3a1	99	83.760	Stegastes_partitus
ENSOARG00000006849	SF3A1	100	97.730	ENSSSCG00000010002	SF3A1	100	97.730	Sus_scrofa
ENSOARG00000006849	SF3A1	95	91.821	ENSTGUG00000010547	SF3A1	99	91.310	Taeniopygia_guttata
ENSOARG00000006849	SF3A1	100	78.994	ENSTRUG00000006118	sf3a1	97	81.046	Takifugu_rubripes
ENSOARG00000006849	SF3A1	63	80.297	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSOARG00000006849	SF3A1	100	89.533	ENSTBEG00000012771	SF3A1	100	89.533	Tupaia_belangeri
ENSOARG00000006849	SF3A1	100	97.481	ENSTTRG00000001535	SF3A1	100	97.481	Tursiops_truncatus
ENSOARG00000006849	SF3A1	99	96.569	ENSUAMG00000006750	SF3A1	99	96.569	Ursus_americanus
ENSOARG00000006849	SF3A1	99	96.429	ENSUMAG00000016665	SF3A1	99	96.429	Ursus_maritimus
ENSOARG00000006849	SF3A1	100	97.604	ENSVVUG00000003075	SF3A1	100	97.604	Vulpes_vulpes
ENSOARG00000006849	SF3A1	100	83.689	ENSXETG00000016144	sf3a1	100	83.438	Xenopus_tropicalis
ENSOARG00000006849	SF3A1	100	81.761	ENSXCOG00000015653	sf3a1	97	83.399	Xiphophorus_couchianus
ENSOARG00000006849	SF3A1	100	81.887	ENSXMAG00000002753	sf3a1	97	83.529	Xiphophorus_maculatus