EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000007574 (Gene tree)
Gene ID: 101112185
Gene Symbol: PARN
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 190164 bases
Position: chr24:13336011-13526174
Accession: 101112185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000008127	R3H	PF01424.22	2.5e-05	1	1
ENSOARP00000008127	RNA_bind	PF08675.11	5.8e-26	1	1
ENSOARP00000008127	CAF1	PF04857.20	9.2e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000008248	PARN-201	1920	XM_004020782	ENSOARP00000008127	494 (aa)	XP_004020831	W5PCG5

Gene Model

Click here to download ENSOARG00000007574's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000007574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000007574	PARN	100	98.178	ENSG00000140694	PARN	91	98.305	Homo_sapiens
ENSOARG00000007574	PARN	100	97.571	ENSAMEG00000011208	PARN	77	97.571	Ailuropoda_melanoleuca
ENSOARG00000007574	PARN	100	76.970	ENSACIG00000000619	parn	84	70.149	Amphilophus_citrinellus
ENSOARG00000007574	PARN	100	79.596	ENSAOCG00000003465	parn	72	79.596	Amphiprion_ocellaris
ENSOARG00000007574	PARN	88	79.493	ENSAPEG00000010661	parn	83	79.493	Amphiprion_percula
ENSOARG00000007574	PARN	100	80.808	ENSATEG00000004661	parn	72	80.808	Anabas_testudineus
ENSOARG00000007574	PARN	99	90.184	ENSAPLG00000013914	PARN	77	90.184	Anas_platyrhynchos
ENSOARG00000007574	PARN	100	87.071	ENSACAG00000004973	PARN	76	87.071	Anolis_carolinensis
ENSOARG00000007574	PARN	100	96.964	ENSANAG00000031516	PARN	91	98.305	Aotus_nancymaae
ENSOARG00000007574	PARN	100	80.000	ENSACLG00000004742	parn	73	80.000	Astatotilapia_calliptera
ENSOARG00000007574	PARN	100	79.555	ENSAMXG00000012390	parn	80	76.923	Astyanax_mexicanus
ENSOARG00000007574	PARN	100	95.749	ENSBTAG00000018097	PARN	75	99.538	Bos_taurus
ENSOARG00000007574	PARN	100	97.368	ENSCJAG00000015866	PARN	91	98.305	Callithrix_jacchus
ENSOARG00000007574	PARN	100	97.166	ENSCAFG00000018795	PARN	77	97.166	Canis_familiaris
ENSOARG00000007574	PARN	100	97.166	ENSCAFG00020024126	PARN	77	97.166	Canis_lupus_dingo
ENSOARG00000007574	PARN	100	99.798	ENSCHIG00000018143	PARN	77	99.798	Capra_hircus
ENSOARG00000007574	PARN	95	62.578	ENSCAPG00000007984	PARN	78	62.578	Cavia_aperea
ENSOARG00000007574	PARN	100	94.939	ENSCPOG00000002263	PARN	77	94.939	Cavia_porcellus
ENSOARG00000007574	PARN	100	97.571	ENSCCAG00000030367	PARN	91	98.305	Cebus_capucinus
ENSOARG00000007574	PARN	67	36.111	ENSCATG00000033196	PNLDC1	70	36.111	Cercocebus_atys
ENSOARG00000007574	PARN	100	97.571	ENSCATG00000041368	PARN	88	97.571	Cercocebus_atys
ENSOARG00000007574	PARN	100	95.547	ENSCLAG00000015406	PARN	77	95.547	Chinchilla_lanigera
ENSOARG00000007574	PARN	100	97.976	ENSCSAG00000008142	PARN	77	97.976	Chlorocebus_sabaeus
ENSOARG00000007574	PARN	88	84.065	ENSCHOG00000007014	PARN	71	84.065	Choloepus_hoffmanni
ENSOARG00000007574	PARN	88	91.455	ENSCPBG00000006609	PARN	75	91.455	Chrysemys_picta_bellii
ENSOARG00000007574	PARN	99	44.510	ENSCING00000010142	-	95	44.510	Ciona_intestinalis
ENSOARG00000007574	PARN	100	83.037	ENSCANG00000028849	-	68	98.305	Colobus_angolensis_palliatus
ENSOARG00000007574	PARN	100	91.498	ENSCGRG00001012096	Parn	78	91.498	Cricetulus_griseus_chok1gshd
ENSOARG00000007574	PARN	96	30.204	ENSCGRG00001007470	-	86	30.204	Cricetulus_griseus_chok1gshd
ENSOARG00000007574	PARN	96	30.204	ENSCGRG00000010221	-	86	30.204	Cricetulus_griseus_crigri
ENSOARG00000007574	PARN	100	91.498	ENSCGRG00000004939	Parn	78	91.498	Cricetulus_griseus_crigri
ENSOARG00000007574	PARN	100	77.172	ENSCSEG00000002064	parn	100	63.348	Cynoglossus_semilaevis
ENSOARG00000007574	PARN	100	79.394	ENSCVAG00000014848	parn	72	79.394	Cyprinodon_variegatus
ENSOARG00000007574	PARN	100	75.758	ENSDARG00000102634	parn	100	59.259	Danio_rerio
ENSOARG00000007574	PARN	100	97.166	ENSDNOG00000000833	PARN	87	97.166	Dasypus_novemcinctus
ENSOARG00000007574	PARN	85	94.297	ENSETEG00000014828	-	69	94.297	Echinops_telfairi
ENSOARG00000007574	PARN	100	97.571	ENSEASG00005011400	PARN	77	97.571	Equus_asinus_asinus
ENSOARG00000007574	PARN	100	97.368	ENSECAG00000017792	PARN	77	97.368	Equus_caballus
ENSOARG00000007574	PARN	70	94.444	ENSEEUG00000010370	PARN	54	94.444	Erinaceus_europaeus
ENSOARG00000007574	PARN	100	78.543	ENSELUG00000013139	parn	65	78.543	Esox_lucius
ENSOARG00000007574	PARN	100	97.976	ENSFCAG00000044961	PARN	77	97.976	Felis_catus
ENSOARG00000007574	PARN	99	89.733	ENSFALG00000003911	PARN	75	89.733	Ficedula_albicollis
ENSOARG00000007574	PARN	75	30.971	ENSFALG00000012081	PNLDC1	70	30.971	Ficedula_albicollis
ENSOARG00000007574	PARN	100	94.939	ENSFDAG00000009234	PARN	77	94.939	Fukomys_damarensis
ENSOARG00000007574	PARN	100	71.627	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSOARG00000007574	PARN	100	77.980	ENSGMOG00000003231	parn	90	77.980	Gadus_morhua
ENSOARG00000007574	PARN	100	90.283	ENSGALG00000003091	PARN	78	90.283	Gallus_gallus
ENSOARG00000007574	PARN	100	79.596	ENSGAFG00000011061	parn	72	79.596	Gambusia_affinis
ENSOARG00000007574	PARN	100	77.980	ENSGACG00000019501	parn	79	77.980	Gasterosteus_aculeatus
ENSOARG00000007574	PARN	100	97.773	ENSGGOG00000025224	PARN	91	98.305	Gorilla_gorilla
ENSOARG00000007574	PARN	100	80.000	ENSHBUG00000017906	parn	83	77.711	Haplochromis_burtoni
ENSOARG00000007574	PARN	100	95.142	ENSHGLG00000010886	PARN	77	95.142	Heterocephalus_glaber_female
ENSOARG00000007574	PARN	100	95.142	ENSHGLG00100014659	PARN	77	95.142	Heterocephalus_glaber_male
ENSOARG00000007574	PARN	99	74.795	ENSHCOG00000008683	parn	83	74.795	Hippocampus_comes
ENSOARG00000007574	PARN	100	65.992	ENSIPUG00000012401	parn	72	65.992	Ictalurus_punctatus
ENSOARG00000007574	PARN	100	96.154	ENSSTOG00000007519	PARN	78	96.154	Ictidomys_tridecemlineatus
ENSOARG00000007574	PARN	100	93.927	ENSJJAG00000023049	Parn	79	93.927	Jaculus_jaculus
ENSOARG00000007574	PARN	100	80.000	ENSKMAG00000009462	parn	73	80.000	Kryptolebias_marmoratus
ENSOARG00000007574	PARN	100	78.990	ENSLBEG00000009167	parn	77	78.990	Labrus_bergylta
ENSOARG00000007574	PARN	99	80.204	ENSLACG00000004207	PARN	100	77.358	Latimeria_chalumnae
ENSOARG00000007574	PARN	100	81.377	ENSLOCG00000000715	parn	72	81.377	Lepisosteus_oculatus
ENSOARG00000007574	PARN	62	31.529	ENSLAFG00000030189	PNLDC1	89	30.539	Loxodonta_africana
ENSOARG00000007574	PARN	100	96.964	ENSLAFG00000015036	PARN	78	96.964	Loxodonta_africana
ENSOARG00000007574	PARN	100	93.117	ENSMFAG00000044852	PARN	75	97.921	Macaca_fascicularis
ENSOARG00000007574	PARN	100	97.773	ENSMMUG00000018849	PARN	77	97.773	Macaca_mulatta
ENSOARG00000007574	PARN	100	97.976	ENSMNEG00000045108	PARN	77	97.976	Macaca_nemestrina
ENSOARG00000007574	PARN	100	97.773	ENSMLEG00000031743	PARN	77	97.773	Mandrillus_leucophaeus
ENSOARG00000007574	PARN	100	78.990	ENSMAMG00000006939	parn	72	78.990	Mastacembelus_armatus
ENSOARG00000007574	PARN	100	80.000	ENSMZEG00005013590	parn	84	77.465	Maylandia_zebra
ENSOARG00000007574	PARN	94	90.733	ENSMGAG00000001004	PARN	73	90.733	Meleagris_gallopavo
ENSOARG00000007574	PARN	100	83.499	ENSMAUG00000008025	Parn	77	83.499	Mesocricetus_auratus
ENSOARG00000007574	PARN	100	97.773	ENSMICG00000016053	PARN	91	100.000	Microcebus_murinus
ENSOARG00000007574	PARN	100	91.093	ENSMOCG00000022211	Parn	99	91.093	Microtus_ochrogaster
ENSOARG00000007574	PARN	100	77.172	ENSMMOG00000011333	parn	80	77.172	Mola_mola
ENSOARG00000007574	PARN	100	94.153	ENSMODG00000004915	PARN	99	94.153	Monodelphis_domestica
ENSOARG00000007574	PARN	100	79.839	ENSMALG00000019426	parn	84	79.839	Monopterus_albus
ENSOARG00000007574	PARN	100	91.093	MGP_CAROLIEiJ_G0020466	Parn	78	91.093	Mus_caroli
ENSOARG00000007574	PARN	100	91.093	ENSMUSG00000022685	Parn	100	93.902	Mus_musculus
ENSOARG00000007574	PARN	100	90.688	MGP_PahariEiJ_G0016172	Parn	78	90.688	Mus_pahari
ENSOARG00000007574	PARN	100	91.093	MGP_SPRETEiJ_G0021361	Parn	78	91.093	Mus_spretus
ENSOARG00000007574	PARN	100	98.178	ENSMPUG00000014464	PARN	77	98.178	Mustela_putorius_furo
ENSOARG00000007574	PARN	100	95.344	ENSMLUG00000005414	PARN	100	95.344	Myotis_lucifugus
ENSOARG00000007574	PARN	100	77.172	ENSNBRG00000006805	parn	83	77.172	Neolamprologus_brichardi
ENSOARG00000007574	PARN	100	97.976	ENSNLEG00000010241	PARN	91	98.305	Nomascus_leucogenys
ENSOARG00000007574	PARN	94	67.965	ENSMEUG00000008178	-	73	67.965	Notamacropus_eugenii
ENSOARG00000007574	PARN	99	90.349	ENSOPRG00000012187	PARN	77	90.349	Ochotona_princeps
ENSOARG00000007574	PARN	100	86.318	ENSODEG00000001617	PARN	79	86.318	Octodon_degus
ENSOARG00000007574	PARN	100	80.202	ENSONIG00000000151	parn	76	80.202	Oreochromis_niloticus
ENSOARG00000007574	PARN	99	95.316	ENSOCUG00000000322	PARN	77	95.316	Oryctolagus_cuniculus
ENSOARG00000007574	PARN	100	78.788	ENSORLG00020010313	parn	74	78.788	Oryzias_latipes_hni
ENSOARG00000007574	PARN	100	78.586	ENSORLG00015000300	parn	74	78.586	Oryzias_latipes_hsok
ENSOARG00000007574	PARN	100	78.788	ENSOMEG00000019555	parn	97	66.968	Oryzias_melastigma
ENSOARG00000007574	PARN	100	93.347	ENSOGAG00000014626	PARN	100	93.347	Otolemur_garnettii
ENSOARG00000007574	PARN	100	97.773	ENSPPAG00000031438	PARN	91	98.305	Pan_paniscus
ENSOARG00000007574	PARN	100	97.773	ENSPPRG00000018583	PARN	77	97.773	Panthera_pardus
ENSOARG00000007574	PARN	100	97.976	ENSPTIG00000012135	PARN	77	97.976	Panthera_tigris_altaica
ENSOARG00000007574	PARN	100	97.773	ENSPTRG00000007792	PARN	91	98.305	Pan_troglodytes
ENSOARG00000007574	PARN	100	93.927	ENSPANG00000020099	PARN	77	93.725	Papio_anubis
ENSOARG00000007574	PARN	100	78.947	ENSPKIG00000022807	parn	78	74.200	Paramormyrops_kingsleyae
ENSOARG00000007574	PARN	100	90.891	ENSPSIG00000014804	PARN	77	90.891	Pelodiscus_sinensis
ENSOARG00000007574	PARN	53	30.798	ENSPSIG00000011419	PNLDC1	79	30.798	Pelodiscus_sinensis
ENSOARG00000007574	PARN	100	76.364	ENSPMGG00000014431	parn	68	76.768	Periophthalmus_magnuspinnatus
ENSOARG00000007574	PARN	100	88.866	ENSPEMG00000018439	Parn	78	88.866	Peromyscus_maniculatus_bairdii
ENSOARG00000007574	PARN	100	68.410	ENSPMAG00000003956	parn	94	68.410	Petromyzon_marinus
ENSOARG00000007574	PARN	86	86.557	ENSPCIG00000001259	PARN	91	93.220	Phascolarctos_cinereus
ENSOARG00000007574	PARN	100	79.596	ENSPFOG00000012823	parn	72	79.596	Poecilia_formosa
ENSOARG00000007574	PARN	100	79.798	ENSPLAG00000006395	parn	72	79.798	Poecilia_latipinna
ENSOARG00000007574	PARN	100	79.798	ENSPMEG00000007711	parn	72	79.798	Poecilia_mexicana
ENSOARG00000007574	PARN	100	79.394	ENSPREG00000000147	parn	72	79.394	Poecilia_reticulata
ENSOARG00000007574	PARN	100	97.177	ENSPPYG00000007123	PARN	77	97.177	Pongo_abelii
ENSOARG00000007574	PARN	88	88.761	ENSPCAG00000001741	PARN	72	88.761	Procavia_capensis
ENSOARG00000007574	PARN	100	94.534	ENSPCOG00000019292	PARN	91	100.000	Propithecus_coquereli
ENSOARG00000007574	PARN	99	93.429	ENSPVAG00000002547	PARN	77	93.429	Pteropus_vampyrus
ENSOARG00000007574	PARN	100	80.000	ENSPNYG00000006835	parn	83	74.498	Pundamilia_nyererei
ENSOARG00000007574	PARN	91	79.464	ENSPNAG00000018905	parn	74	79.464	Pygocentrus_nattereri
ENSOARG00000007574	PARN	100	90.688	ENSRNOG00000002912	Parn	98	86.869	Rattus_norvegicus
ENSOARG00000007574	PARN	100	95.547	ENSSBOG00000034726	PARN	77	95.547	Saimiri_boliviensis_boliviensis
ENSOARG00000007574	PARN	85	93.079	ENSSHAG00000008493	PARN	94	93.079	Sarcophilus_harrisii
ENSOARG00000007574	PARN	100	80.162	ENSSFOG00015014165	parn	82	78.340	Scleropages_formosus
ENSOARG00000007574	PARN	100	77.778	ENSSMAG00000000685	parn	80	72.455	Scophthalmus_maximus
ENSOARG00000007574	PARN	100	79.394	ENSSDUG00000014555	parn	72	79.394	Seriola_dumerili
ENSOARG00000007574	PARN	88	95.402	ENSSARG00000014339	PARN	75	95.402	Sorex_araneus
ENSOARG00000007574	PARN	100	90.688	ENSSPUG00000007719	PARN	77	90.688	Sphenodon_punctatus
ENSOARG00000007574	PARN	100	81.010	ENSSPAG00000007095	parn	80	75.556	Stegastes_partitus
ENSOARG00000007574	PARN	100	97.773	ENSSSCG00000007878	PARN	69	97.773	Sus_scrofa
ENSOARG00000007574	PARN	71	31.111	ENSTGUG00000011418	PNLDC1	69	31.111	Taeniopygia_guttata
ENSOARG00000007574	PARN	99	89.571	ENSTGUG00000004971	PARN	76	89.571	Taeniopygia_guttata
ENSOARG00000007574	PARN	100	79.596	ENSTNIG00000008252	parn	79	79.596	Tetraodon_nigroviridis
ENSOARG00000007574	PARN	88	78.391	ENSTBEG00000010407	PARN	75	78.391	Tupaia_belangeri
ENSOARG00000007574	PARN	99	97.331	ENSTTRG00000002843	PARN	77	97.331	Tursiops_truncatus
ENSOARG00000007574	PARN	88	84.101	ENSUAMG00000008283	PARN	94	79.817	Ursus_americanus
ENSOARG00000007574	PARN	100	97.773	ENSUMAG00000004527	PARN	77	97.773	Ursus_maritimus
ENSOARG00000007574	PARN	99	92.813	ENSVPAG00000008968	PARN	79	92.813	Vicugna_pacos
ENSOARG00000007574	PARN	100	97.773	ENSVVUG00000019509	PARN	77	97.773	Vulpes_vulpes
ENSOARG00000007574	PARN	100	82.794	ENSXETG00000010994	parn	94	82.794	Xenopus_tropicalis
ENSOARG00000007574	PARN	100	74.849	ENSXCOG00000015990	parn	83	74.849	Xiphophorus_couchianus
ENSOARG00000007574	PARN	100	79.596	ENSXMAG00000014783	parn	72	79.596	Xiphophorus_maculatus