EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000008370 (Gene tree)
Gene ID: 101115975
Gene Symbol: GPATCH8
Alias: -
Full Name: integrin subunit alpha 2b
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 113866 bases
Position: chr11:43588829-43702694
Accession: 101115719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000008984	zf-C2H2_jaz	PF12171.8	7.2e-07	1	1
ENSOARP00000008990	zf-C2H2_jaz	PF12171.8	2e-06	1	1
ENSOARP00000008984	G-patch	PF01585.23	5.8e-14	1	1
ENSOARP00000008990	G-patch	PF01585.23	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000009120	GPATCH8-203	4347	XM_004012987	ENSOARP00000008990	1448 (aa)	XP_004013036	W5PEX5
ENSOART00000009114	GPATCH8-201	6148	-	ENSOARP00000008984	1179 (aa)	-	W5PEW9
ENSOART00000009117	GPATCH8-202	5713	XM_004012986	ENSOARP00000008987	1034 (aa)	XP_004013035	W5PEX2

Gene Model

Click here to download ENSOARG00000008370's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas04015	Rap1 signaling pathway	KEGG
oas04151	PI3K-Akt signaling pathway	KEGG
oas04510	Focal adhesion	KEGG
oas04512	ECM-receptor interaction	KEGG
oas04611	Platelet activation	KEGG
oas04640	Hematopoietic cell lineage	KEGG
oas04810	Regulation of actin cytoskeleton	KEGG
oas05165	Human papillomavirus infection	KEGG
oas05200	Pathways in cancer	KEGG
oas05222	Small cell lung cancer	KEGG
oas05410	Hypertrophic cardiomyopathy (HCM)	KEGG
oas05412	Arrhythmogenic right ventricular cardiomyopathy (ARVC)	KEGG
oas05414	Dilated cardiomyopathy (DCM)	KEGG
oas05418	Fluid shear stress and atherosclerosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000008370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000008370	GPATCH8	100	87.931	ENSG00000186566	GPATCH8	93	100.000	Homo_sapiens
ENSOARG00000008370	GPATCH8	100	87.923	ENSAMEG00000018376	GPATCH8	99	87.641	Ailuropoda_melanoleuca
ENSOARG00000008370	GPATCH8	57	63.614	ENSAPLG00000003095	GPATCH8	55	63.333	Anas_platyrhynchos
ENSOARG00000008370	GPATCH8	100	87.533	ENSANAG00000032773	GPATCH8	100	86.671	Aotus_nancymaae
ENSOARG00000008370	GPATCH8	100	94.367	ENSBTAG00000038316	GPATCH8	100	92.247	Bos_taurus
ENSOARG00000008370	GPATCH8	100	86.870	ENSCJAG00000009807	GPATCH8	100	86.008	Callithrix_jacchus
ENSOARG00000008370	GPATCH8	100	88.985	ENSCAFG00000014136	GPATCH8	100	88.056	Canis_familiaris
ENSOARG00000008370	GPATCH8	99	88.755	ENSCAFG00020009830	GPATCH8	99	87.952	Canis_lupus_dingo
ENSOARG00000008370	GPATCH8	99	94.758	ENSCHIG00000008962	GPATCH8	99	92.900	Capra_hircus
ENSOARG00000008370	GPATCH8	100	86.799	ENSTSYG00000033153	GPATCH8	100	87.688	Carlito_syrichta
ENSOARG00000008370	GPATCH8	100	87.268	ENSCCAG00000030686	GPATCH8	100	86.538	Cebus_capucinus
ENSOARG00000008370	GPATCH8	100	87.666	ENSCATG00000028156	GPATCH8	100	86.804	Cercocebus_atys
ENSOARG00000008370	GPATCH8	100	87.467	ENSCSAG00000003586	GPATCH8	100	86.605	Chlorocebus_sabaeus
ENSOARG00000008370	GPATCH8	100	62.655	ENSCPBG00000008955	GPATCH8	62	94.286	Chrysemys_picta_bellii
ENSOARG00000008370	GPATCH8	100	87.599	ENSCANG00000039731	GPATCH8	100	86.870	Colobus_angolensis_palliatus
ENSOARG00000008370	GPATCH8	100	84.050	ENSCGRG00001020210	Gpatch8	100	82.462	Cricetulus_griseus_chok1gshd
ENSOARG00000008370	GPATCH8	100	84.050	ENSCGRG00000017090	Gpatch8	100	82.462	Cricetulus_griseus_crigri
ENSOARG00000008370	GPATCH8	100	85.762	ENSDNOG00000005102	GPATCH8	100	83.974	Dasypus_novemcinctus
ENSOARG00000008370	GPATCH8	100	86.962	ENSDORG00000027664	Gpatch8	100	84.844	Dipodomys_ordii
ENSOARG00000008370	GPATCH8	100	82.216	ENSETEG00000001325	GPATCH8	100	81.221	Echinops_telfairi
ENSOARG00000008370	GPATCH8	69	44.578	ENSEBUG00000005749	gpatch8	70	48.936	Eptatretus_burgeri
ENSOARG00000008370	GPATCH8	100	89.449	ENSEASG00005010264	GPATCH8	92	88.786	Equus_asinus_asinus
ENSOARG00000008370	GPATCH8	100	89.383	ENSECAG00000040232	GPATCH8	99	88.719	Equus_caballus
ENSOARG00000008370	GPATCH8	94	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
ENSOARG00000008370	GPATCH8	57	93.012	ENSFCAG00000043334	GPATCH8	56	93.054	Felis_catus
ENSOARG00000008370	GPATCH8	99	62.591	ENSFALG00000009554	GPATCH8	54	62.575	Ficedula_albicollis
ENSOARG00000008370	GPATCH8	100	59.003	ENSGALG00000041556	GPATCH8	54	59.562	Gallus_gallus
ENSOARG00000008370	GPATCH8	100	61.942	ENSGAGG00000008358	GPATCH8	62	94.286	Gopherus_agassizii
ENSOARG00000008370	GPATCH8	100	85.875	ENSGGOG00000013860	GPATCH8	100	85.146	Gorilla_gorilla
ENSOARG00000008370	GPATCH8	100	71.674	ENSHGLG00000017687	GPATCH8	55	70.764	Heterocephalus_glaber_female
ENSOARG00000008370	GPATCH8	74	79.388	ENSHGLG00100010738	GPATCH8	97	81.573	Heterocephalus_glaber_male
ENSOARG00000008370	GPATCH8	100	87.997	ENSSTOG00000025022	GPATCH8	100	86.472	Ictidomys_tridecemlineatus
ENSOARG00000008370	GPATCH8	100	84.570	ENSJJAG00000017797	Gpatch8	100	82.384	Jaculus_jaculus
ENSOARG00000008370	GPATCH8	100	52.021	ENSLACG00000017530	GPATCH8	54	55.981	Latimeria_chalumnae
ENSOARG00000008370	GPATCH8	88	90.055	ENSLAFG00000032250	GPATCH8	100	90.603	Loxodonta_africana
ENSOARG00000008370	GPATCH8	100	87.732	ENSMFAG00000039126	GPATCH8	100	86.870	Macaca_fascicularis
ENSOARG00000008370	GPATCH8	100	87.732	ENSMMUG00000012658	GPATCH8	100	86.870	Macaca_mulatta
ENSOARG00000008370	GPATCH8	100	87.599	ENSMNEG00000031426	GPATCH8	100	86.737	Macaca_nemestrina
ENSOARG00000008370	GPATCH8	100	87.732	ENSMLEG00000038860	GPATCH8	100	86.870	Mandrillus_leucophaeus
ENSOARG00000008370	GPATCH8	100	85.109	ENSMAUG00000021770	Gpatch8	100	82.925	Mesocricetus_auratus
ENSOARG00000008370	GPATCH8	100	87.923	ENSMICG00000028586	GPATCH8	100	87.193	Microcebus_murinus
ENSOARG00000008370	GPATCH8	100	83.960	ENSMOCG00000001658	Gpatch8	100	82.508	Microtus_ochrogaster
ENSOARG00000008370	GPATCH8	100	77.309	ENSMODG00000011442	GPATCH8	100	75.264	Monodelphis_domestica
ENSOARG00000008370	GPATCH8	100	84.412	MGP_CAROLIEiJ_G0017255	Gpatch8	100	82.563	Mus_caroli
ENSOARG00000008370	GPATCH8	100	84.931	ENSMUSG00000034621	Gpatch8	100	82.750	Mus_musculus
ENSOARG00000008370	GPATCH8	100	84.585	MGP_PahariEiJ_G0018385	Gpatch8	100	83.004	Mus_pahari
ENSOARG00000008370	GPATCH8	100	84.519	MGP_SPRETEiJ_G0018098	Gpatch8	100	82.938	Mus_spretus
ENSOARG00000008370	GPATCH8	100	88.255	ENSMPUG00000009274	GPATCH8	100	87.392	Mustela_putorius_furo
ENSOARG00000008370	GPATCH8	99	84.392	ENSMLUG00000013840	GPATCH8	99	85.754	Myotis_lucifugus
ENSOARG00000008370	GPATCH8	100	86.252	ENSNGAG00000021860	Gpatch8	100	84.402	Nannospalax_galili
ENSOARG00000008370	GPATCH8	81	76.401	ENSMEUG00000011799	GPATCH8	100	76.655	Notamacropus_eugenii
ENSOARG00000008370	GPATCH8	100	77.903	ENSOPRG00000008816	GPATCH8	100	77.704	Ochotona_princeps
ENSOARG00000008370	GPATCH8	100	83.942	ENSOCUG00000003291	GPATCH8	100	85.136	Oryctolagus_cuniculus
ENSOARG00000008370	GPATCH8	97	87.253	ENSOGAG00000033643	GPATCH8	100	86.435	Otolemur_garnettii
ENSOARG00000008370	GPATCH8	100	87.798	ENSPPAG00000040523	GPATCH8	100	87.003	Pan_paniscus
ENSOARG00000008370	GPATCH8	100	89.250	ENSPPRG00000023310	GPATCH8	100	88.454	Panthera_pardus
ENSOARG00000008370	GPATCH8	100	87.525	ENSPTIG00000020001	GPATCH8	100	86.596	Panthera_tigris_altaica
ENSOARG00000008370	GPATCH8	100	87.798	ENSPTRG00000009278	GPATCH8	100	87.069	Pan_troglodytes
ENSOARG00000008370	GPATCH8	100	87.666	ENSPANG00000021304	GPATCH8	100	86.804	Papio_anubis
ENSOARG00000008370	GPATCH8	99	60.812	ENSPSIG00000006255	GPATCH8	56	61.091	Pelodiscus_sinensis
ENSOARG00000008370	GPATCH8	100	84.580	ENSPEMG00000008337	Gpatch8	100	82.396	Peromyscus_maniculatus_bairdii
ENSOARG00000008370	GPATCH8	95	75.869	ENSPCIG00000019927	GPATCH8	100	73.922	Phascolarctos_cinereus
ENSOARG00000008370	GPATCH8	100	86.936	ENSPPYG00000008329	GPATCH8	100	86.141	Pongo_abelii
ENSOARG00000008370	GPATCH8	76	100.000	ENSPCAG00000004441	GPATCH8	71	100.000	Procavia_capensis
ENSOARG00000008370	GPATCH8	100	85.733	ENSPCOG00000019209	GPATCH8	100	84.871	Propithecus_coquereli
ENSOARG00000008370	GPATCH8	100	87.989	ENSPVAG00000003155	GPATCH8	100	86.463	Pteropus_vampyrus
ENSOARG00000008370	GPATCH8	100	82.786	ENSRNOG00000021044	Gpatch8	100	81.012	Rattus_norvegicus
ENSOARG00000008370	GPATCH8	100	87.599	ENSRBIG00000033713	GPATCH8	100	86.870	Rhinopithecus_bieti
ENSOARG00000008370	GPATCH8	100	87.599	ENSRROG00000029623	GPATCH8	100	86.870	Rhinopithecus_roxellana
ENSOARG00000008370	GPATCH8	100	87.334	ENSSBOG00000023544	GPATCH8	100	86.671	Saimiri_boliviensis_boliviensis
ENSOARG00000008370	GPATCH8	100	76.979	ENSSHAG00000016140	GPATCH8	100	74.934	Sarcophilus_harrisii
ENSOARG00000008370	GPATCH8	100	83.632	ENSSARG00000007516	GPATCH8	100	83.168	Sorex_araneus
ENSOARG00000008370	GPATCH8	100	88.999	ENSSSCG00000017357	ITGA2B	100	88.050	Sus_scrofa
ENSOARG00000008370	GPATCH8	90	91.587	ENSTBEG00000009486	GPATCH8	91	91.778	Tupaia_belangeri
ENSOARG00000008370	GPATCH8	99	87.073	ENSTTRG00000010527	GPATCH8	100	85.666	Tursiops_truncatus
ENSOARG00000008370	GPATCH8	95	85.794	ENSUMAG00000013891	GPATCH8	100	84.745	Ursus_maritimus
ENSOARG00000008370	GPATCH8	91	93.202	ENSVPAG00000006937	GPATCH8	99	89.957	Vicugna_pacos
ENSOARG00000008370	GPATCH8	100	88.985	ENSVVUG00000017996	GPATCH8	100	87.989	Vulpes_vulpes