EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000010739 (Gene tree)
Gene ID: -
Gene Symbol: UPF1
Alias: -
Full Name: UPF1%2C RNA helicase and ATPase
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 30275 bases
Position: chr5:4106372-4136646
Accession: 101107598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000011525	UPF1_Zn_bind	PF09416.10	5e-75	1	1
ENSOARP00000011525	ResIII	PF04851.15	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000011687	UPF1-201	3252	XM_004009149	ENSOARP00000011525	1084 (aa)	-	W5PM50

Gene Model

Click here to download ENSOARG00000010739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000010739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000010739	UPF1	100	97.240	ENSG00000005007	UPF1	96	97.240	Homo_sapiens
ENSOARG00000010739	UPF1	100	90.901	ENSAPOG00000010916	-	96	90.993	Acanthochromis_polyacanthus
ENSOARG00000010739	UPF1	100	89.459	ENSAPOG00000023773	upf1	96	89.655	Acanthochromis_polyacanthus
ENSOARG00000010739	UPF1	100	97.518	ENSAMEG00000011474	UPF1	96	97.518	Ailuropoda_melanoleuca
ENSOARG00000010739	UPF1	100	89.194	ENSACIG00000019949	upf1	96	89.734	Amphilophus_citrinellus
ENSOARG00000010739	UPF1	92	93.493	ENSACIG00000010985	-	96	93.594	Amphilophus_citrinellus
ENSOARG00000010739	UPF1	100	90.901	ENSAOCG00000006352	-	96	90.993	Amphiprion_ocellaris
ENSOARG00000010739	UPF1	100	88.950	ENSAOCG00000018519	upf1	96	89.655	Amphiprion_ocellaris
ENSOARG00000010739	UPF1	100	90.901	ENSAPEG00000006292	-	96	90.993	Amphiprion_percula
ENSOARG00000010739	UPF1	100	88.950	ENSAPEG00000016344	upf1	96	89.655	Amphiprion_percula
ENSOARG00000010739	UPF1	100	88.134	ENSATEG00000017867	upf1	96	89.040	Anabas_testudineus
ENSOARG00000010739	UPF1	100	90.993	ENSATEG00000016606	-	96	91.085	Anabas_testudineus
ENSOARG00000010739	UPF1	94	97.835	ENSAPLG00000009175	UPF1	96	97.835	Anas_platyrhynchos
ENSOARG00000010739	UPF1	93	98.028	ENSANAG00000024107	UPF1	92	98.028	Aotus_nancymaae
ENSOARG00000010739	UPF1	100	90.800	ENSACLG00000022630	-	96	90.800	Astatotilapia_calliptera
ENSOARG00000010739	UPF1	100	88.919	ENSACLG00000007181	upf1	96	89.459	Astatotilapia_calliptera
ENSOARG00000010739	UPF1	100	91.268	ENSAMXG00000042187	upf1	96	92.004	Astyanax_mexicanus
ENSOARG00000010739	UPF1	100	97.698	ENSBTAG00000020922	UPF1	96	97.698	Bos_taurus
ENSOARG00000010739	UPF1	93	50.146	WBGene00004880	smg-2	89	50.595	Caenorhabditis_elegans
ENSOARG00000010739	UPF1	100	97.240	ENSCJAG00000019627	UPF1	96	97.240	Callithrix_jacchus
ENSOARG00000010739	UPF1	100	97.608	ENSCAFG00000014578	UPF1	96	97.608	Canis_familiaris
ENSOARG00000010739	UPF1	100	96.596	ENSCAFG00020012347	UPF1	96	96.596	Canis_lupus_dingo
ENSOARG00000010739	UPF1	100	97.606	ENSCHIG00000011018	UPF1	96	97.606	Capra_hircus
ENSOARG00000010739	UPF1	96	97.500	ENSTSYG00000008877	UPF1	96	97.500	Carlito_syrichta
ENSOARG00000010739	UPF1	96	96.158	ENSCAPG00000005758	UPF1	93	96.158	Cavia_aperea
ENSOARG00000010739	UPF1	100	95.120	ENSCPOG00000025463	UPF1	96	95.120	Cavia_porcellus
ENSOARG00000010739	UPF1	100	97.238	ENSCCAG00000032175	UPF1	96	97.238	Cebus_capucinus
ENSOARG00000010739	UPF1	93	99.212	ENSCATG00000040306	UPF1	95	99.212	Cercocebus_atys
ENSOARG00000010739	UPF1	93	99.211	ENSCLAG00000004037	UPF1	96	99.211	Chinchilla_lanigera
ENSOARG00000010739	UPF1	100	96.228	ENSCSAG00000005276	UPF1	96	96.228	Chlorocebus_sabaeus
ENSOARG00000010739	UPF1	100	94.490	ENSCPBG00000012513	UPF1	96	94.766	Chrysemys_picta_bellii
ENSOARG00000010739	UPF1	81	76.337	ENSCING00000021399	-	99	76.906	Ciona_intestinalis
ENSOARG00000010739	UPF1	100	70.856	ENSCSAVG00000006533	-	96	70.856	Ciona_savignyi
ENSOARG00000010739	UPF1	93	99.408	ENSCANG00000029819	UPF1	94	99.408	Colobus_angolensis_palliatus
ENSOARG00000010739	UPF1	100	95.672	ENSCGRG00001021067	Upf1	96	95.672	Cricetulus_griseus_chok1gshd
ENSOARG00000010739	UPF1	93	98.817	ENSCGRG00000013480	Upf1	95	98.817	Cricetulus_griseus_crigri
ENSOARG00000010739	UPF1	100	90.708	ENSCSEG00000016159	-	96	90.800	Cynoglossus_semilaevis
ENSOARG00000010739	UPF1	100	84.191	ENSCSEG00000017239	upf1	96	84.375	Cynoglossus_semilaevis
ENSOARG00000010739	UPF1	100	90.441	ENSCVAG00000010561	upf1	96	90.625	Cyprinodon_variegatus
ENSOARG00000010739	UPF1	100	91.085	ENSDARG00000016302	upf1	96	91.820	Danio_rerio
ENSOARG00000010739	UPF1	96	94.168	ENSDORG00000009984	Upf1	92	96.256	Dipodomys_ordii
ENSOARG00000010739	UPF1	88	69.794	FBgn0030354	Upf1	84	66.285	Drosophila_melanogaster
ENSOARG00000010739	UPF1	57	83.441	ENSEBUG00000010069	upf1	95	83.441	Eptatretus_burgeri
ENSOARG00000010739	UPF1	100	96.593	ENSEASG00005006549	UPF1	96	96.593	Equus_asinus_asinus
ENSOARG00000010739	UPF1	100	96.593	ENSECAG00000010639	UPF1	96	96.593	Equus_caballus
ENSOARG00000010739	UPF1	100	88.655	ENSELUG00000020917	upf1	96	89.113	Esox_lucius
ENSOARG00000010739	UPF1	100	89.762	ENSELUG00000012916	-	96	89.954	Esox_lucius
ENSOARG00000010739	UPF1	100	97.516	ENSFCAG00000009757	UPF1	96	97.516	Felis_catus
ENSOARG00000010739	UPF1	96	95.407	ENSFALG00000009312	UPF1	94	95.407	Ficedula_albicollis
ENSOARG00000010739	UPF1	93	99.112	ENSFDAG00000014816	UPF1	96	99.112	Fukomys_damarensis
ENSOARG00000010739	UPF1	100	86.509	ENSFHEG00000006428	upf1	96	86.509	Fundulus_heteroclitus
ENSOARG00000010739	UPF1	86	92.996	ENSFHEG00000016276	-	93	93.191	Fundulus_heteroclitus
ENSOARG00000010739	UPF1	100	90.349	ENSGMOG00000007541	upf1	96	90.901	Gadus_morhua
ENSOARG00000010739	UPF1	100	95.396	ENSGALG00000003220	UPF1	96	95.396	Gallus_gallus
ENSOARG00000010739	UPF1	65	93.901	ENSGAFG00000015443	-	88	91.621	Gambusia_affinis
ENSOARG00000010739	UPF1	100	90.248	ENSGAFG00000004831	upf1	96	90.432	Gambusia_affinis
ENSOARG00000010739	UPF1	100	95.396	ENSGAGG00000022217	UPF1	96	95.396	Gopherus_agassizii
ENSOARG00000010739	UPF1	93	98.323	ENSGGOG00000002608	UPF1	95	98.323	Gorilla_gorilla
ENSOARG00000010739	UPF1	87	91.915	ENSHBUG00000008939	upf1	91	91.915	Haplochromis_burtoni
ENSOARG00000010739	UPF1	90	77.395	ENSHBUG00000014694	upf1	95	77.610	Haplochromis_burtoni
ENSOARG00000010739	UPF1	100	96.780	ENSHGLG00000010900	UPF1	96	96.688	Heterocephalus_glaber_female
ENSOARG00000010739	UPF1	93	97.239	ENSHGLG00100005904	UPF1	93	97.140	Heterocephalus_glaber_male
ENSOARG00000010739	UPF1	100	89.604	ENSHCOG00000008918	upf1	96	92.361	Hippocampus_comes
ENSOARG00000010739	UPF1	100	91.728	ENSIPUG00000005108	UPF1	96	92.371	Ictalurus_punctatus
ENSOARG00000010739	UPF1	100	97.053	ENSSTOG00000009196	UPF1	96	97.053	Ictidomys_tridecemlineatus
ENSOARG00000010739	UPF1	100	96.225	ENSJJAG00000023151	Upf1	96	96.225	Jaculus_jaculus
ENSOARG00000010739	UPF1	100	90.901	ENSKMAG00000004962	upf1	96	90.901	Kryptolebias_marmoratus
ENSOARG00000010739	UPF1	100	87.387	ENSLBEG00000014862	upf1	96	88.838	Labrus_bergylta
ENSOARG00000010739	UPF1	100	90.809	ENSLBEG00000027848	-	96	90.901	Labrus_bergylta
ENSOARG00000010739	UPF1	61	96.667	ENSLACG00000008482	UPF1	95	96.667	Latimeria_chalumnae
ENSOARG00000010739	UPF1	100	93.100	ENSLOCG00000002072	upf1	96	93.376	Lepisosteus_oculatus
ENSOARG00000010739	UPF1	100	96.869	ENSLAFG00000014963	UPF1	96	96.869	Loxodonta_africana
ENSOARG00000010739	UPF1	100	97.240	ENSMFAG00000037748	UPF1	96	97.240	Macaca_fascicularis
ENSOARG00000010739	UPF1	100	97.240	ENSMMUG00000023286	UPF1	96	97.240	Macaca_mulatta
ENSOARG00000010739	UPF1	100	97.240	ENSMNEG00000000046	UPF1	96	97.240	Macaca_nemestrina
ENSOARG00000010739	UPF1	93	99.408	ENSMLEG00000028404	UPF1	96	99.408	Mandrillus_leucophaeus
ENSOARG00000010739	UPF1	100	90.165	ENSMAMG00000006231	-	96	90.717	Mastacembelus_armatus
ENSOARG00000010739	UPF1	100	87.953	ENSMAMG00000006229	upf1	96	89.040	Mastacembelus_armatus
ENSOARG00000010739	UPF1	100	87.873	ENSMZEG00005003489	upf1	96	89.263	Maylandia_zebra
ENSOARG00000010739	UPF1	100	90.800	ENSMZEG00005016386	-	96	90.800	Maylandia_zebra
ENSOARG00000010739	UPF1	93	97.438	ENSMGAG00000004745	UPF1	96	97.438	Meleagris_gallopavo
ENSOARG00000010739	UPF1	93	98.817	ENSMAUG00000011398	Upf1	92	98.817	Mesocricetus_auratus
ENSOARG00000010739	UPF1	100	96.044	ENSMICG00000001659	UPF1	96	96.044	Microcebus_murinus
ENSOARG00000010739	UPF1	100	96.685	ENSMOCG00000005699	Upf1	96	96.685	Microtus_ochrogaster
ENSOARG00000010739	UPF1	94	91.061	ENSMMOG00000007537	-	96	91.159	Mola_mola
ENSOARG00000010739	UPF1	100	88.582	ENSMMOG00000007881	upf1	96	89.236	Mola_mola
ENSOARG00000010739	UPF1	99	96.419	ENSMODG00000003689	UPF1	96	96.419	Monodelphis_domestica
ENSOARG00000010739	UPF1	100	88.674	ENSMALG00000000144	upf1	96	89.227	Monopterus_albus
ENSOARG00000010739	UPF1	100	89.560	ENSMALG00000018100	-	96	89.652	Monopterus_albus
ENSOARG00000010739	UPF1	100	96.593	MGP_CAROLIEiJ_G0031142	Upf1	96	96.593	Mus_caroli
ENSOARG00000010739	UPF1	100	96.593	ENSMUSG00000058301	Upf1	96	96.593	Mus_musculus
ENSOARG00000010739	UPF1	100	96.593	MGP_PahariEiJ_G0021607	Upf1	96	96.593	Mus_pahari
ENSOARG00000010739	UPF1	100	96.593	MGP_SPRETEiJ_G0032260	Upf1	96	96.593	Mus_spretus
ENSOARG00000010739	UPF1	100	96.596	ENSMPUG00000015516	UPF1	96	96.596	Mustela_putorius_furo
ENSOARG00000010739	UPF1	100	96.504	ENSMLUG00000012122	UPF1	96	96.504	Myotis_lucifugus
ENSOARG00000010739	UPF1	100	96.133	ENSNGAG00000024107	Upf1	96	96.133	Nannospalax_galili
ENSOARG00000010739	UPF1	100	87.179	ENSNBRG00000000670	upf1	96	87.718	Neolamprologus_brichardi
ENSOARG00000010739	UPF1	100	88.462	ENSNBRG00000022069	-	96	92.423	Neolamprologus_brichardi
ENSOARG00000010739	UPF1	93	93.393	ENSNLEG00000006062	UPF1	96	93.393	Nomascus_leucogenys
ENSOARG00000010739	UPF1	83	93.446	ENSMEUG00000014146	-	79	93.446	Notamacropus_eugenii
ENSOARG00000010739	UPF1	93	90.039	ENSOPRG00000014018	UPF1	96	90.039	Ochotona_princeps
ENSOARG00000010739	UPF1	100	96.777	ENSODEG00000012426	UPF1	96	96.777	Octodon_degus
ENSOARG00000010739	UPF1	100	88.145	ENSONIG00000010452	upf1	96	89.536	Oreochromis_niloticus
ENSOARG00000010739	UPF1	100	90.892	ENSONIG00000012729	-	96	90.892	Oreochromis_niloticus
ENSOARG00000010739	UPF1	100	95.600	ENSOANG00000004568	UPF1	96	96.140	Ornithorhynchus_anatinus
ENSOARG00000010739	UPF1	100	90.809	ENSORLG00000008453	upf1	96	90.809	Oryzias_latipes
ENSOARG00000010739	UPF1	100	90.809	ENSORLG00020014758	upf1	96	90.809	Oryzias_latipes_hni
ENSOARG00000010739	UPF1	100	90.809	ENSORLG00015010165	upf1	96	90.809	Oryzias_latipes_hsok
ENSOARG00000010739	UPF1	100	90.717	ENSOMEG00000003665	upf1	96	90.809	Oryzias_melastigma
ENSOARG00000010739	UPF1	100	96.320	ENSOGAG00000012866	UPF1	96	96.320	Otolemur_garnettii
ENSOARG00000010739	UPF1	97	95.775	ENSPPAG00000043884	UPF1	96	95.775	Pan_paniscus
ENSOARG00000010739	UPF1	100	97.516	ENSPPRG00000023470	UPF1	96	97.516	Panthera_pardus
ENSOARG00000010739	UPF1	94	96.165	ENSPTIG00000010159	UPF1	96	96.165	Panthera_tigris_altaica
ENSOARG00000010739	UPF1	100	97.240	ENSPTRG00000010721	UPF1	96	97.240	Pan_troglodytes
ENSOARG00000010739	UPF1	100	97.240	ENSPANG00000008847	UPF1	96	97.240	Papio_anubis
ENSOARG00000010739	UPF1	94	93.385	ENSPKIG00000006069	upf1	96	93.842	Paramormyrops_kingsleyae
ENSOARG00000010739	UPF1	67	97.390	ENSPSIG00000009491	UPF1	95	97.390	Pelodiscus_sinensis
ENSOARG00000010739	UPF1	100	87.351	ENSPMGG00000017327	upf1	96	87.649	Periophthalmus_magnuspinnatus
ENSOARG00000010739	UPF1	100	96.685	ENSPEMG00000001085	Upf1	96	96.685	Peromyscus_maniculatus_bairdii
ENSOARG00000010739	UPF1	100	85.833	ENSPMAG00000001206	upf1	96	85.649	Petromyzon_marinus
ENSOARG00000010739	UPF1	100	95.856	ENSPCIG00000006156	UPF1	96	95.856	Phascolarctos_cinereus
ENSOARG00000010739	UPF1	100	90.340	ENSPLAG00000016232	-	96	90.524	Poecilia_latipinna
ENSOARG00000010739	UPF1	100	87.511	ENSPLAG00000018155	-	96	87.511	Poecilia_latipinna
ENSOARG00000010739	UPF1	100	88.062	ENSPMEG00000011443	-	96	88.062	Poecilia_mexicana
ENSOARG00000010739	UPF1	100	90.432	ENSPMEG00000016319	-	96	90.616	Poecilia_mexicana
ENSOARG00000010739	UPF1	100	90.156	ENSPREG00000011247	-	96	90.340	Poecilia_reticulata
ENSOARG00000010739	UPF1	100	87.967	ENSPREG00000009940	upf1	96	87.967	Poecilia_reticulata
ENSOARG00000010739	UPF1	100	91.805	ENSPPYG00000009752	UPF1	96	91.812	Pongo_abelii
ENSOARG00000010739	UPF1	75	100.000	ENSPCAG00000012962	UPF1	72	100.000	Procavia_capensis
ENSOARG00000010739	UPF1	100	97.332	ENSPCOG00000023813	UPF1	96	97.332	Propithecus_coquereli
ENSOARG00000010739	UPF1	68	95.225	ENSPVAG00000003183	UPF1	64	95.225	Pteropus_vampyrus
ENSOARG00000010739	UPF1	100	90.800	ENSPNYG00000016731	-	96	90.800	Pundamilia_nyererei
ENSOARG00000010739	UPF1	100	87.873	ENSPNYG00000003694	upf1	96	89.263	Pundamilia_nyererei
ENSOARG00000010739	UPF1	100	91.268	ENSPNAG00000025614	upf1	96	92.004	Pygocentrus_nattereri
ENSOARG00000010739	UPF1	100	96.593	ENSRNOG00000020134	Upf1	96	96.593	Rattus_norvegicus
ENSOARG00000010739	UPF1	93	96.943	ENSRBIG00000013894	UPF1	94	97.971	Rhinopithecus_bieti
ENSOARG00000010739	UPF1	93	99.408	ENSRROG00000040935	UPF1	94	99.408	Rhinopithecus_roxellana
ENSOARG00000010739	UPF1	78	54.895	YMR080C	NAM7	87	54.895	Saccharomyces_cerevisiae
ENSOARG00000010739	UPF1	93	99.309	ENSSBOG00000023632	UPF1	93	99.309	Saimiri_boliviensis_boliviensis
ENSOARG00000010739	UPF1	93	98.622	ENSSHAG00000010499	UPF1	96	98.622	Sarcophilus_harrisii
ENSOARG00000010739	UPF1	100	93.100	ENSSFOG00015021095	upf1	96	95.678	Scleropages_formosus
ENSOARG00000010739	UPF1	100	90.809	ENSSMAG00000021018	-	96	90.901	Scophthalmus_maximus
ENSOARG00000010739	UPF1	100	87.024	ENSSMAG00000005055	upf1	96	88.033	Scophthalmus_maximus
ENSOARG00000010739	UPF1	100	88.134	ENSSDUG00000013320	upf1	96	89.221	Seriola_dumerili
ENSOARG00000010739	UPF1	100	91.176	ENSSDUG00000009629	-	96	91.268	Seriola_dumerili
ENSOARG00000010739	UPF1	100	91.176	ENSSLDG00000006878	-	96	91.268	Seriola_lalandi_dorsalis
ENSOARG00000010739	UPF1	100	88.940	ENSSLDG00000020868	upf1	96	89.507	Seriola_lalandi_dorsalis
ENSOARG00000010739	UPF1	100	94.843	ENSSPUG00000010538	UPF1	96	94.936	Sphenodon_punctatus
ENSOARG00000010739	UPF1	100	87.213	ENSSPAG00000000003	upf1	96	87.339	Stegastes_partitus
ENSOARG00000010739	UPF1	100	90.984	ENSSPAG00000011521	-	96	90.984	Stegastes_partitus
ENSOARG00000010739	UPF1	100	97.606	ENSSSCG00000039301	UPF1	96	98.328	Sus_scrofa
ENSOARG00000010739	UPF1	86	89.091	ENSTGUG00000001057	UPF1	99	93.890	Taeniopygia_guttata
ENSOARG00000010739	UPF1	100	88.674	ENSTRUG00000000150	upf1	96	88.613	Takifugu_rubripes
ENSOARG00000010739	UPF1	100	89.788	ENSTRUG00000005131	-	96	89.880	Takifugu_rubripes
ENSOARG00000010739	UPF1	100	92.634	ENSTTRG00000011544	UPF1	96	92.634	Tursiops_truncatus
ENSOARG00000010739	UPF1	100	96.504	ENSUAMG00000007093	UPF1	96	96.504	Ursus_americanus
ENSOARG00000010739	UPF1	96	97.605	ENSUMAG00000006652	UPF1	96	98.425	Ursus_maritimus
ENSOARG00000010739	UPF1	100	96.596	ENSVVUG00000007797	UPF1	96	96.596	Vulpes_vulpes
ENSOARG00000010739	UPF1	100	81.668	ENSXETG00000013602	upf1	96	81.577	Xenopus_tropicalis
ENSOARG00000010739	UPF1	92	93.333	ENSXCOG00000005764	-	96	93.333	Xiphophorus_couchianus
ENSOARG00000010739	UPF1	100	88.132	ENSXCOG00000015275	-	96	88.132	Xiphophorus_couchianus
ENSOARG00000010739	UPF1	100	90.248	ENSXMAG00000002540	-	96	90.432	Xiphophorus_maculatus
ENSOARG00000010739	UPF1	100	88.040	ENSXMAG00000001703	-	98	88.198	Xiphophorus_maculatus