EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000010788 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 94542 bases
Position: chr2:173979851-174074392
Accession: 101104555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000011579	R3H	PF01424.22	4.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000011745	R3HDM1-201	3537	XM_004004730	ENSOARP00000011579	1095 (aa)	XP_004004779	W5PMA4

Gene Model

Click here to download ENSOARG00000010788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000010788's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000010788	R3HDM1	70	49.748	ENSOARG00000016371	ARPP21	95	49.244
ENSOARG00000010788	R3HDM1	88	56.386	ENSOARG00000006929	R3HDM2	95	57.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000010788	R3HDM1	100	93.926	ENSG00000048991	R3HDM1	100	93.654	Homo_sapiens
ENSOARG00000010788	R3HDM1	89	48.563	ENSAPOG00000020850	r3hdm1	97	47.354	Acanthochromis_polyacanthus
ENSOARG00000010788	R3HDM1	100	95.376	ENSAMEG00000014886	R3HDM1	100	95.467	Ailuropoda_melanoleuca
ENSOARG00000010788	R3HDM1	89	47.037	ENSAOCG00000005192	r3hdm1	99	46.654	Amphiprion_ocellaris
ENSOARG00000010788	R3HDM1	89	46.449	ENSAPEG00000016108	r3hdm1	99	46.570	Amphiprion_percula
ENSOARG00000010788	R3HDM1	89	45.977	ENSATEG00000000232	r3hdm1	99	46.072	Anabas_testudineus
ENSOARG00000010788	R3HDM1	100	79.273	ENSAPLG00000015231	R3HDM1	100	79.273	Anas_platyrhynchos
ENSOARG00000010788	R3HDM1	100	77.201	ENSACAG00000001676	R3HDM1	100	78.257	Anolis_carolinensis
ENSOARG00000010788	R3HDM1	100	94.022	ENSANAG00000035334	R3HDM1	100	93.931	Aotus_nancymaae
ENSOARG00000010788	R3HDM1	79	50.921	ENSACLG00000027282	r3hdm1	94	50.488	Astatotilapia_calliptera
ENSOARG00000010788	R3HDM1	93	73.141	ENSAMXG00000012861	R3HDM1	100	62.026	Astyanax_mexicanus
ENSOARG00000010788	R3HDM1	100	56.098	ENSAMXG00000003536	r3hdm1	100	62.005	Astyanax_mexicanus
ENSOARG00000010788	R3HDM1	100	96.025	ENSBTAG00000013302	R3HDM1	100	96.025	Bos_taurus
ENSOARG00000010788	R3HDM1	100	93.829	ENSCJAG00000011718	R3HDM1	100	93.829	Callithrix_jacchus
ENSOARG00000010788	R3HDM1	100	95.648	ENSCAFG00000005075	R3HDM1	100	95.739	Canis_familiaris
ENSOARG00000010788	R3HDM1	100	95.558	ENSCAFG00020016119	R3HDM1	100	95.648	Canis_lupus_dingo
ENSOARG00000010788	R3HDM1	100	99.544	ENSCHIG00000020851	R3HDM1	100	99.544	Capra_hircus
ENSOARG00000010788	R3HDM1	100	89.279	ENSCPOG00000012784	R3HDM1	100	89.279	Cavia_porcellus
ENSOARG00000010788	R3HDM1	100	93.654	ENSCCAG00000027199	R3HDM1	100	93.563	Cebus_capucinus
ENSOARG00000010788	R3HDM1	100	95.028	ENSCATG00000023642	R3HDM1	100	93.382	Cercocebus_atys
ENSOARG00000010788	R3HDM1	100	88.742	ENSCLAG00000007962	R3HDM1	100	89.369	Chinchilla_lanigera
ENSOARG00000010788	R3HDM1	100	90.853	ENSCSAG00000016356	R3HDM1	100	90.150	Chlorocebus_sabaeus
ENSOARG00000010788	R3HDM1	87	83.379	ENSCHOG00000013638	R3HDM1	91	83.104	Choloepus_hoffmanni
ENSOARG00000010788	R3HDM1	88	80.849	ENSCPBG00000009645	R3HDM1	100	90.406	Chrysemys_picta_bellii
ENSOARG00000010788	R3HDM1	100	93.659	ENSCANG00000034748	R3HDM1	100	93.388	Colobus_angolensis_palliatus
ENSOARG00000010788	R3HDM1	99	88.173	ENSCGRG00001012357	R3hdm1	97	88.173	Cricetulus_griseus_chok1gshd
ENSOARG00000010788	R3HDM1	99	90.909	ENSCGRG00000012080	R3hdm1	100	90.698	Cricetulus_griseus_crigri
ENSOARG00000010788	R3HDM1	89	43.251	ENSCSEG00000008944	r3hdm1	89	55.902	Cynoglossus_semilaevis
ENSOARG00000010788	R3HDM1	89	48.788	ENSCVAG00000007582	r3hdm1	99	47.911	Cyprinodon_variegatus
ENSOARG00000010788	R3HDM1	64	37.433	ENSDARG00000061081	arpp21	60	44.467	Danio_rerio
ENSOARG00000010788	R3HDM1	100	90.580	ENSDNOG00000000771	R3HDM1	100	90.670	Dasypus_novemcinctus
ENSOARG00000010788	R3HDM1	100	82.621	ENSETEG00000013606	R3HDM1	100	82.985	Echinops_telfairi
ENSOARG00000010788	R3HDM1	62	43.557	ENSEBUG00000014746	arpp21	97	44.150	Eptatretus_burgeri
ENSOARG00000010788	R3HDM1	100	95.541	ENSEASG00005007392	R3HDM1	100	95.541	Equus_asinus_asinus
ENSOARG00000010788	R3HDM1	100	95.459	ENSECAG00000019114	R3HDM1	100	95.459	Equus_caballus
ENSOARG00000010788	R3HDM1	86	88.839	ENSEEUG00000012589	R3HDM1	86	88.839	Erinaceus_europaeus
ENSOARG00000010788	R3HDM1	94	55.823	ENSELUG00000004909	R3HDM1	99	55.587	Esox_lucius
ENSOARG00000010788	R3HDM1	93	50.589	ENSELUG00000014413	r3hdm1	100	51.075	Esox_lucius
ENSOARG00000010788	R3HDM1	100	95.905	ENSFCAG00000027113	R3HDM1	100	95.905	Felis_catus
ENSOARG00000010788	R3HDM1	74	73.474	ENSFALG00000013731	R3HDM1	93	68.112	Ficedula_albicollis
ENSOARG00000010788	R3HDM1	100	88.401	ENSFDAG00000016478	R3HDM1	99	94.649	Fukomys_damarensis
ENSOARG00000010788	R3HDM1	89	46.648	ENSFHEG00000018713	r3hdm1	100	47.374	Fundulus_heteroclitus
ENSOARG00000010788	R3HDM1	58	65.000	ENSGMOG00000006042	-	74	64.783	Gadus_morhua
ENSOARG00000010788	R3HDM1	100	55.407	ENSGALG00000012246	R3HDM1	99	85.246	Gallus_gallus
ENSOARG00000010788	R3HDM1	79	49.130	ENSGAFG00000006203	r3hdm1	94	50.000	Gambusia_affinis
ENSOARG00000010788	R3HDM1	87	48.618	ENSGACG00000014925	r3hdm1	99	47.664	Gasterosteus_aculeatus
ENSOARG00000010788	R3HDM1	100	78.617	ENSGAGG00000007840	R3HDM1	100	78.071	Gopherus_agassizii
ENSOARG00000010788	R3HDM1	100	93.563	ENSGGOG00000008156	R3HDM1	100	93.291	Gorilla_gorilla
ENSOARG00000010788	R3HDM1	100	89.065	ENSHGLG00000015718	R3HDM1	99	94.834	Heterocephalus_glaber_female
ENSOARG00000010788	R3HDM1	100	88.801	ENSHGLG00100003184	-	100	89.369	Heterocephalus_glaber_male
ENSOARG00000010788	R3HDM1	100	69.182	ENSHGLG00100015374	-	100	69.182	Heterocephalus_glaber_male
ENSOARG00000010788	R3HDM1	79	45.094	ENSHCOG00000013366	r3hdm1	88	59.250	Hippocampus_comes
ENSOARG00000010788	R3HDM1	85	67.169	ENSIPUG00000013629	r3hdm1	95	68.750	Ictalurus_punctatus
ENSOARG00000010788	R3HDM1	81	66.826	ENSIPUG00000001676	R3HDM1	99	66.746	Ictalurus_punctatus
ENSOARG00000010788	R3HDM1	100	93.654	ENSSTOG00000007572	R3HDM1	99	95.756	Ictidomys_tridecemlineatus
ENSOARG00000010788	R3HDM1	95	71.364	ENSLACG00000005334	R3HDM1	100	71.872	Latimeria_chalumnae
ENSOARG00000010788	R3HDM1	100	67.263	ENSLOCG00000001641	r3hdm1	100	66.995	Lepisosteus_oculatus
ENSOARG00000010788	R3HDM1	100	91.542	ENSLAFG00000009065	R3HDM1	100	91.366	Loxodonta_africana
ENSOARG00000010788	R3HDM1	100	93.835	ENSMFAG00000030331	R3HDM1	100	95.813	Macaca_fascicularis
ENSOARG00000010788	R3HDM1	100	93.654	ENSMMUG00000009844	R3HDM1	100	93.382	Macaca_mulatta
ENSOARG00000010788	R3HDM1	100	93.654	ENSMNEG00000027793	R3HDM1	100	95.813	Macaca_nemestrina
ENSOARG00000010788	R3HDM1	100	93.926	ENSMLEG00000043189	R3HDM1	100	93.654	Mandrillus_leucophaeus
ENSOARG00000010788	R3HDM1	89	49.516	ENSMAMG00000004532	r3hdm1	99	49.031	Mastacembelus_armatus
ENSOARG00000010788	R3HDM1	89	49.709	ENSMZEG00005003157	r3hdm1	93	57.663	Maylandia_zebra
ENSOARG00000010788	R3HDM1	100	78.981	ENSMGAG00000012461	R3HDM1	100	78.799	Meleagris_gallopavo
ENSOARG00000010788	R3HDM1	100	87.632	ENSMAUG00000010315	R3hdm1	100	90.698	Mesocricetus_auratus
ENSOARG00000010788	R3HDM1	96	69.573	ENSMICG00000042655	-	100	88.850	Microcebus_murinus
ENSOARG00000010788	R3HDM1	100	93.122	ENSMICG00000005900	-	100	93.122	Microcebus_murinus
ENSOARG00000010788	R3HDM1	90	78.278	ENSMODG00000000923	R3HDM1	97	78.278	Monodelphis_domestica
ENSOARG00000010788	R3HDM1	99	46.441	ENSMALG00000009000	r3hdm1	100	46.127	Monopterus_albus
ENSOARG00000010788	R3HDM1	100	87.048	MGP_CAROLIEiJ_G0014543	R3hdm1	99	93.173	Mus_caroli
ENSOARG00000010788	R3HDM1	100	87.048	ENSMUSG00000056211	R3hdm1	99	93.173	Mus_musculus
ENSOARG00000010788	R3HDM1	100	86.960	MGP_PahariEiJ_G0027779	R3hdm1	99	92.620	Mus_pahari
ENSOARG00000010788	R3HDM1	100	87.225	MGP_SPRETEiJ_G0015350	R3hdm1	99	93.358	Mus_spretus
ENSOARG00000010788	R3HDM1	100	95.822	ENSMPUG00000002412	R3HDM1	100	95.822	Mustela_putorius_furo
ENSOARG00000010788	R3HDM1	100	94.033	ENSMLUG00000013824	R3HDM1	100	93.852	Myotis_lucifugus
ENSOARG00000010788	R3HDM1	100	93.744	ENSNLEG00000008622	R3HDM1	100	93.563	Nomascus_leucogenys
ENSOARG00000010788	R3HDM1	89	72.923	ENSMEUG00000011784	R3HDM1	100	72.821	Notamacropus_eugenii
ENSOARG00000010788	R3HDM1	100	88.292	ENSODEG00000008607	R3HDM1	100	90.698	Octodon_degus
ENSOARG00000010788	R3HDM1	95	48.959	ENSONIG00000012017	r3hdm1	98	48.107	Oreochromis_niloticus
ENSOARG00000010788	R3HDM1	100	82.396	ENSOANG00000007987	R3HDM1	100	82.396	Ornithorhynchus_anatinus
ENSOARG00000010788	R3HDM1	89	92.378	ENSOCUG00000017366	R3HDM1	98	92.276	Oryctolagus_cuniculus
ENSOARG00000010788	R3HDM1	89	43.926	ENSORLG00000004297	r3hdm1	99	44.708	Oryzias_latipes
ENSOARG00000010788	R3HDM1	89	45.870	ENSORLG00015017355	r3hdm1	99	46.785	Oryzias_latipes_hsok
ENSOARG00000010788	R3HDM1	100	92.909	ENSOGAG00000003136	R3HDM1	100	92.818	Otolemur_garnettii
ENSOARG00000010788	R3HDM1	100	93.756	ENSPPAG00000027858	R3HDM1	100	93.484	Pan_paniscus
ENSOARG00000010788	R3HDM1	100	95.541	ENSPPRG00000002626	R3HDM1	100	95.632	Panthera_pardus
ENSOARG00000010788	R3HDM1	100	95.541	ENSPTIG00000016581	R3HDM1	100	95.632	Panthera_tigris_altaica
ENSOARG00000010788	R3HDM1	100	93.665	ENSPTRG00000012494	R3HDM1	100	93.394	Pan_troglodytes
ENSOARG00000010788	R3HDM1	100	93.835	ENSPANG00000026448	R3HDM1	100	93.563	Papio_anubis
ENSOARG00000010788	R3HDM1	84	75.949	ENSPKIG00000004328	r3hdm1	91	76.190	Paramormyrops_kingsleyae
ENSOARG00000010788	R3HDM1	100	78.890	ENSPSIG00000012915	R3HDM1	100	78.799	Pelodiscus_sinensis
ENSOARG00000010788	R3HDM1	100	88.370	ENSPEMG00000015187	R3hdm1	100	90.365	Peromyscus_maniculatus_bairdii
ENSOARG00000010788	R3HDM1	87	44.092	ENSPMAG00000003369	-	98	44.039	Petromyzon_marinus
ENSOARG00000010788	R3HDM1	100	84.755	ENSPCIG00000002491	R3HDM1	100	84.755	Phascolarctos_cinereus
ENSOARG00000010788	R3HDM1	89	46.816	ENSPFOG00000015036	r3hdm1	99	46.579	Poecilia_formosa
ENSOARG00000010788	R3HDM1	80	49.626	ENSPLAG00000018042	r3hdm1	95	49.623	Poecilia_latipinna
ENSOARG00000010788	R3HDM1	80	50.215	ENSPMEG00000023947	r3hdm1	95	50.054	Poecilia_mexicana
ENSOARG00000010788	R3HDM1	89	48.735	ENSPREG00000007902	r3hdm1	88	62.053	Poecilia_reticulata
ENSOARG00000010788	R3HDM1	100	92.120	ENSPPYG00000012815	R3HDM1	100	91.757	Pongo_abelii
ENSOARG00000010788	R3HDM1	100	81.347	ENSPCAG00000006208	R3HDM1	100	81.711	Procavia_capensis
ENSOARG00000010788	R3HDM1	100	91.131	ENSPCOG00000012698	R3HDM1	100	92.020	Propithecus_coquereli
ENSOARG00000010788	R3HDM1	100	85.973	ENSPVAG00000006098	R3HDM1	100	85.973	Pteropus_vampyrus
ENSOARG00000010788	R3HDM1	66	38.942	ENSPNAG00000004162	arpp21	92	37.973	Pygocentrus_nattereri
ENSOARG00000010788	R3HDM1	100	56.780	ENSPNAG00000013952	r3hdm1	100	62.911	Pygocentrus_nattereri
ENSOARG00000010788	R3HDM1	100	86.960	ENSRNOG00000004099	R3hdm1	100	86.761	Rattus_norvegicus
ENSOARG00000010788	R3HDM1	100	92.579	ENSRBIG00000033317	R3HDM1	100	97.786	Rhinopithecus_bieti
ENSOARG00000010788	R3HDM1	100	93.750	ENSRROG00000034534	R3HDM1	100	93.478	Rhinopithecus_roxellana
ENSOARG00000010788	R3HDM1	100	93.382	ENSSBOG00000020389	R3HDM1	100	93.291	Saimiri_boliviensis_boliviensis
ENSOARG00000010788	R3HDM1	100	85.141	ENSSHAG00000016999	R3HDM1	100	85.141	Sarcophilus_harrisii
ENSOARG00000010788	R3HDM1	93	70.602	ENSSFOG00015014134	r3hdm1	100	70.531	Scleropages_formosus
ENSOARG00000010788	R3HDM1	100	57.015	ENSSFOG00015019851	-	99	57.964	Scleropages_formosus
ENSOARG00000010788	R3HDM1	99	45.564	ENSSMAG00000001669	r3hdm1	99	44.905	Scophthalmus_maximus
ENSOARG00000010788	R3HDM1	89	47.710	ENSSDUG00000010749	r3hdm1	99	48.088	Seriola_dumerili
ENSOARG00000010788	R3HDM1	99	47.405	ENSSLDG00000004499	r3hdm1	99	47.524	Seriola_lalandi_dorsalis
ENSOARG00000010788	R3HDM1	69	83.389	ENSSARG00000000352	-	69	83.389	Sorex_araneus
ENSOARG00000010788	R3HDM1	100	80.801	ENSSPUG00000004167	R3HDM1	100	80.528	Sphenodon_punctatus
ENSOARG00000010788	R3HDM1	89	50.000	ENSSPAG00000004648	r3hdm1	99	49.506	Stegastes_partitus
ENSOARG00000010788	R3HDM1	100	96.182	ENSSSCG00000015692	R3HDM1	100	96.182	Sus_scrofa
ENSOARG00000010788	R3HDM1	100	73.956	ENSTGUG00000011750	R3HDM1	100	73.956	Taeniopygia_guttata
ENSOARG00000010788	R3HDM1	79	47.639	ENSTRUG00000011654	r3hdm1	93	47.198	Takifugu_rubripes
ENSOARG00000010788	R3HDM1	86	46.162	ENSTNIG00000010362	r3hdm1	95	46.915	Tetraodon_nigroviridis
ENSOARG00000010788	R3HDM1	100	89.152	ENSTTRG00000003935	R3HDM1	100	89.152	Tursiops_truncatus
ENSOARG00000010788	R3HDM1	70	95.871	ENSUAMG00000024806	R3HDM1	99	95.756	Ursus_americanus
ENSOARG00000010788	R3HDM1	100	90.917	ENSUMAG00000005552	R3HDM1	100	92.320	Ursus_maritimus
ENSOARG00000010788	R3HDM1	93	94.737	ENSVPAG00000007333	R3HDM1	93	94.737	Vicugna_pacos
ENSOARG00000010788	R3HDM1	100	92.775	ENSVVUG00000006457	R3HDM1	100	92.863	Vulpes_vulpes
ENSOARG00000010788	R3HDM1	89	68.288	ENSXETG00000019330	r3hdm1	100	67.984	Xenopus_tropicalis
ENSOARG00000010788	R3HDM1	67	50.648	ENSXCOG00000017448	r3hdm1	94	50.194	Xiphophorus_couchianus
ENSOARG00000010788	R3HDM1	89	46.667	ENSXMAG00000007885	r3hdm1	99	45.837	Xiphophorus_maculatus