EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000010856 (Gene tree)
Gene ID: 101104392
Gene Symbol: PYM1
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 20073 bases
Position: chr3:163311145-163331217
Accession: 101104392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000011639	Mago-bind	PF09282.10	5.9e-14	1	1
ENSOARP00000011640	Mago-bind	PF09282.10	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000011806	PYM1-202	4014	-	ENSOARP00000011640	204 (aa)	-	W5PMG5
ENSOART00000011805	PYM1-201	4011	-	ENSOARP00000011639	203 (aa)	XP_012030170	W5PMG4

Gene Model

Click here to download ENSOARG00000010856's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03013	RNA transport	KEGG
oas03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000010856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000010856	PYM1	94	93.717	ENSG00000170473	PYM1	94	93.717	Homo_sapiens
ENSOARG00000010856	PYM1	99	57.944	ENSAPOG00000023045	pym1	94	58.049	Acanthochromis_polyacanthus
ENSOARG00000010856	PYM1	92	88.770	ENSAMEG00000003091	PYM1	93	88.298	Ailuropoda_melanoleuca
ENSOARG00000010856	PYM1	99	60.930	ENSACIG00000012769	pym1	94	59.903	Amphilophus_citrinellus
ENSOARG00000010856	PYM1	99	58.294	ENSAOCG00000021358	pym1	94	58.333	Amphiprion_ocellaris
ENSOARG00000010856	PYM1	99	58.294	ENSAPEG00000022679	pym1	94	58.333	Amphiprion_percula
ENSOARG00000010856	PYM1	99	58.216	ENSATEG00000024022	pym1	94	61.951	Anabas_testudineus
ENSOARG00000010856	PYM1	94	69.268	ENSACAG00000005714	PYM1	94	69.268	Anolis_carolinensis
ENSOARG00000010856	PYM1	94	92.670	ENSANAG00000036967	PYM1	94	92.670	Aotus_nancymaae
ENSOARG00000010856	PYM1	100	56.881	ENSAMXG00000007650	pym1	94	58.738	Astyanax_mexicanus
ENSOARG00000010856	PYM1	100	98.030	ENSBTAG00000031146	PYM1	100	98.030	Bos_taurus
ENSOARG00000010856	PYM1	94	92.670	ENSCJAG00000041077	PYM1	94	92.670	Callithrix_jacchus
ENSOARG00000010856	PYM1	94	94.764	ENSCAFG00000000076	PYM1	94	94.764	Canis_familiaris
ENSOARG00000010856	PYM1	94	94.764	ENSCAFG00020026099	PYM1	94	94.764	Canis_lupus_dingo
ENSOARG00000010856	PYM1	100	99.507	ENSCHIG00000026207	PYM1	100	99.507	Capra_hircus
ENSOARG00000010856	PYM1	94	90.576	ENSTSYG00000000787	PYM1	94	90.576	Carlito_syrichta
ENSOARG00000010856	PYM1	88	87.709	ENSCAPG00000010374	PYM1	94	87.709	Cavia_aperea
ENSOARG00000010856	PYM1	94	88.482	ENSCPOG00000031546	PYM1	94	88.482	Cavia_porcellus
ENSOARG00000010856	PYM1	94	93.194	ENSCCAG00000026187	PYM1	94	93.194	Cebus_capucinus
ENSOARG00000010856	PYM1	94	93.194	ENSCATG00000018801	PYM1	94	93.194	Cercocebus_atys
ENSOARG00000010856	PYM1	94	86.387	ENSCLAG00000007964	PYM1	94	86.387	Chinchilla_lanigera
ENSOARG00000010856	PYM1	89	92.778	ENSCSAG00000005291	PYM1	92	92.778	Chlorocebus_sabaeus
ENSOARG00000010856	PYM1	98	41.148	ENSCING00000006448	-	93	41.414	Ciona_intestinalis
ENSOARG00000010856	PYM1	98	40.191	ENSCSAVG00000009805	-	89	39.594	Ciona_savignyi
ENSOARG00000010856	PYM1	94	93.194	ENSCANG00000020338	-	94	93.194	Colobus_angolensis_palliatus
ENSOARG00000010856	PYM1	98	84.848	ENSCANG00000019757	-	86	89.474	Colobus_angolensis_palliatus
ENSOARG00000010856	PYM1	94	72.251	ENSCGRG00001004231	-	93	72.251	Cricetulus_griseus_chok1gshd
ENSOARG00000010856	PYM1	94	87.435	ENSCGRG00001018051	-	94	87.435	Cricetulus_griseus_chok1gshd
ENSOARG00000010856	PYM1	94	87.435	ENSCGRG00000012495	-	94	87.435	Cricetulus_griseus_crigri
ENSOARG00000010856	PYM1	94	72.251	ENSCGRG00000018933	-	93	72.251	Cricetulus_griseus_crigri
ENSOARG00000010856	PYM1	94	55.882	ENSCSEG00000021531	pym1	94	58.824	Cynoglossus_semilaevis
ENSOARG00000010856	PYM1	94	61.194	ENSCVAG00000017360	pym1	81	60.417	Cyprinodon_variegatus
ENSOARG00000010856	PYM1	99	56.000	ENSDARG00000046024	pym1	94	52.174	Danio_rerio
ENSOARG00000010856	PYM1	94	89.529	ENSDNOG00000048414	PYM1	86	89.529	Dasypus_novemcinctus
ENSOARG00000010856	PYM1	94	91.099	ENSDORG00000029448	Pym1	94	91.099	Dipodomys_ordii
ENSOARG00000010856	PYM1	93	35.149	FBgn0034918	Pym	88	35.602	Drosophila_melanogaster
ENSOARG00000010856	PYM1	89	86.667	ENSETEG00000004461	-	94	86.667	Echinops_telfairi
ENSOARG00000010856	PYM1	93	89.362	ENSEASG00005002271	PYM1	84	91.304	Equus_asinus_asinus
ENSOARG00000010856	PYM1	94	93.717	ENSECAG00000011870	PYM1	94	93.717	Equus_caballus
ENSOARG00000010856	PYM1	96	58.794	ENSELUG00000024250	pym1	94	59.596	Esox_lucius
ENSOARG00000010856	PYM1	94	93.717	ENSFCAG00000013967	PYM1	94	93.717	Felis_catus
ENSOARG00000010856	PYM1	94	89.005	ENSFDAG00000006314	PYM1	94	89.005	Fukomys_damarensis
ENSOARG00000010856	PYM1	94	58.911	ENSFHEG00000005884	pym1	94	58.911	Fundulus_heteroclitus
ENSOARG00000010856	PYM1	94	56.796	ENSGMOG00000007239	pym1	93	56.796	Gadus_morhua
ENSOARG00000010856	PYM1	94	70.256	ENSGALG00000046169	PYM1	94	70.256	Gallus_gallus
ENSOARG00000010856	PYM1	99	61.502	ENSGAFG00000003280	pym1	93	61.692	Gambusia_affinis
ENSOARG00000010856	PYM1	100	55.340	ENSGACG00000010703	pym1	94	56.410	Gasterosteus_aculeatus
ENSOARG00000010856	PYM1	93	64.356	ENSGAGG00000001973	PYM1	88	64.851	Gopherus_agassizii
ENSOARG00000010856	PYM1	94	93.194	ENSGGOG00000043246	PYM1	94	93.194	Gorilla_gorilla
ENSOARG00000010856	PYM1	94	60.099	ENSHBUG00000012719	pym1	94	61.576	Haplochromis_burtoni
ENSOARG00000010856	PYM1	94	90.576	ENSHGLG00000017155	PYM1	94	90.576	Heterocephalus_glaber_female
ENSOARG00000010856	PYM1	94	90.576	ENSHGLG00100015341	PYM1	94	90.576	Heterocephalus_glaber_male
ENSOARG00000010856	PYM1	99	57.692	ENSHCOG00000007987	pym1	80	58.163	Hippocampus_comes
ENSOARG00000010856	PYM1	100	58.525	ENSIPUG00000005975	wibga	94	58.738	Ictalurus_punctatus
ENSOARG00000010856	PYM1	94	92.147	ENSSTOG00000014206	PYM1	94	92.147	Ictidomys_tridecemlineatus
ENSOARG00000010856	PYM1	94	86.911	ENSJJAG00000013338	Pym1	94	86.911	Jaculus_jaculus
ENSOARG00000010856	PYM1	99	57.207	ENSKMAG00000006351	pym1	95	56.338	Kryptolebias_marmoratus
ENSOARG00000010856	PYM1	99	59.615	ENSLBEG00000015707	pym1	93	59.694	Labrus_bergylta
ENSOARG00000010856	PYM1	89	62.694	ENSLACG00000014398	PYM1	90	62.245	Latimeria_chalumnae
ENSOARG00000010856	PYM1	94	93.194	ENSLAFG00000002369	PYM1	94	93.194	Loxodonta_africana
ENSOARG00000010856	PYM1	94	93.194	ENSMFAG00000003048	PYM1	94	93.194	Macaca_fascicularis
ENSOARG00000010856	PYM1	94	93.194	ENSMMUG00000011002	PYM1	94	93.194	Macaca_mulatta
ENSOARG00000010856	PYM1	94	93.194	ENSMNEG00000034677	PYM1	94	93.194	Macaca_nemestrina
ENSOARG00000010856	PYM1	94	93.194	ENSMLEG00000007971	PYM1	94	93.194	Mandrillus_leucophaeus
ENSOARG00000010856	PYM1	99	57.604	ENSMAMG00000001588	pym1	94	59.135	Mastacembelus_armatus
ENSOARG00000010856	PYM1	94	59.606	ENSMZEG00005026458	pym1	94	61.084	Maylandia_zebra
ENSOARG00000010856	PYM1	94	87.435	ENSMAUG00000007318	Pym1	94	87.435	Mesocricetus_auratus
ENSOARG00000010856	PYM1	94	91.099	ENSMICG00000032962	PYM1	94	91.099	Microcebus_murinus
ENSOARG00000010856	PYM1	94	86.387	ENSMOCG00000010208	Pym1	94	86.387	Microtus_ochrogaster
ENSOARG00000010856	PYM1	99	59.709	ENSMMOG00000009301	pym1	92	60.825	Mola_mola
ENSOARG00000010856	PYM1	99	59.524	ENSMALG00000013496	pym1	94	59.701	Monopterus_albus
ENSOARG00000010856	PYM1	94	87.435	MGP_CAROLIEiJ_G0015953	Pym1	94	87.435	Mus_caroli
ENSOARG00000010856	PYM1	94	88.482	ENSMUSG00000064030	Pym1	94	88.482	Mus_musculus
ENSOARG00000010856	PYM1	94	86.911	MGP_PahariEiJ_G0031131	Pym1	94	86.911	Mus_pahari
ENSOARG00000010856	PYM1	94	88.482	MGP_SPRETEiJ_G0016778	Pym1	94	88.482	Mus_spretus
ENSOARG00000010856	PYM1	94	94.764	ENSMPUG00000000931	PYM1	94	94.764	Mustela_putorius_furo
ENSOARG00000010856	PYM1	94	85.864	ENSMLUG00000003586	PYM1	90	90.608	Myotis_lucifugus
ENSOARG00000010856	PYM1	93	85.789	ENSNGAG00000019207	Pym1	92	85.789	Nannospalax_galili
ENSOARG00000010856	PYM1	99	60.849	ENSNBRG00000006951	pym1	94	61.576	Neolamprologus_brichardi
ENSOARG00000010856	PYM1	94	93.717	ENSNLEG00000017588	PYM1	94	93.717	Nomascus_leucogenys
ENSOARG00000010856	PYM1	88	78.090	ENSMEUG00000001017	PYM1	93	77.966	Notamacropus_eugenii
ENSOARG00000010856	PYM1	89	87.778	ENSOPRG00000007797	PYM1	89	87.293	Ochotona_princeps
ENSOARG00000010856	PYM1	94	90.052	ENSODEG00000004289	PYM1	94	90.052	Octodon_degus
ENSOARG00000010856	PYM1	94	59.223	ENSONIG00000016740	pym1	94	60.680	Oreochromis_niloticus
ENSOARG00000010856	PYM1	93	86.772	ENSOCUG00000025969	PYM1	85	86.772	Oryctolagus_cuniculus
ENSOARG00000010856	PYM1	99	62.736	ENSORLG00000030592	pym1	94	62.376	Oryzias_latipes
ENSOARG00000010856	PYM1	99	62.150	ENSORLG00020011264	pym1	94	62.255	Oryzias_latipes_hni
ENSOARG00000010856	PYM1	99	63.507	ENSORLG00015005287	pym1	94	63.184	Oryzias_latipes_hsok
ENSOARG00000010856	PYM1	99	62.621	ENSOMEG00000022250	pym1	94	61.929	Oryzias_melastigma
ENSOARG00000010856	PYM1	89	93.333	ENSOGAG00000007038	PYM1	88	93.333	Otolemur_garnettii
ENSOARG00000010856	PYM1	94	93.717	ENSPPAG00000043630	PYM1	94	93.717	Pan_paniscus
ENSOARG00000010856	PYM1	94	92.147	ENSPPRG00000013243	PYM1	94	92.147	Panthera_pardus
ENSOARG00000010856	PYM1	94	91.623	ENSPTIG00000017380	PYM1	94	91.623	Panthera_tigris_altaica
ENSOARG00000010856	PYM1	94	93.717	ENSPTRG00000005067	PYM1	94	93.717	Pan_troglodytes
ENSOARG00000010856	PYM1	94	92.670	ENSPANG00000009562	PYM1	94	92.670	Papio_anubis
ENSOARG00000010856	PYM1	100	62.264	ENSPKIG00000006301	pym1	94	61.500	Paramormyrops_kingsleyae
ENSOARG00000010856	PYM1	91	64.103	ENSPSIG00000003043	PYM1	91	64.103	Pelodiscus_sinensis
ENSOARG00000010856	PYM1	100	60.287	ENSPMGG00000023161	pym1	94	60.406	Periophthalmus_magnuspinnatus
ENSOARG00000010856	PYM1	94	85.340	ENSPEMG00000009372	Pym1	94	85.340	Peromyscus_maniculatus_bairdii
ENSOARG00000010856	PYM1	92	77.419	ENSPCIG00000024658	PYM1	91	77.128	Phascolarctos_cinereus
ENSOARG00000010856	PYM1	99	60.930	ENSPFOG00000008193	pym1	93	61.084	Poecilia_formosa
ENSOARG00000010856	PYM1	99	60.465	ENSPLAG00000009228	pym1	93	60.591	Poecilia_latipinna
ENSOARG00000010856	PYM1	99	60.465	ENSPMEG00000001505	pym1	93	60.591	Poecilia_mexicana
ENSOARG00000010856	PYM1	89	91.667	ENSPPYG00000004635	PYM1	92	91.667	Pongo_abelii
ENSOARG00000010856	PYM1	94	92.147	ENSPCOG00000019706	PYM1	94	92.147	Propithecus_coquereli
ENSOARG00000010856	PYM1	89	93.923	ENSPVAG00000011437	PYM1	92	93.923	Pteropus_vampyrus
ENSOARG00000010856	PYM1	94	60.396	ENSPNYG00000012871	pym1	94	60.396	Pundamilia_nyererei
ENSOARG00000010856	PYM1	99	58.716	ENSPNAG00000018833	pym1	94	59.330	Pygocentrus_nattereri
ENSOARG00000010856	PYM1	92	64.706	ENSRNOG00000049415	AABR07055413.1	91	59.574	Rattus_norvegicus
ENSOARG00000010856	PYM1	94	81.250	ENSRNOG00000058130	Pym1	94	81.250	Rattus_norvegicus
ENSOARG00000010856	PYM1	94	88.482	ENSRBIG00000033362	PYM1	94	88.482	Rhinopithecus_bieti
ENSOARG00000010856	PYM1	94	93.194	ENSRROG00000043620	PYM1	94	93.194	Rhinopithecus_roxellana
ENSOARG00000010856	PYM1	94	93.194	ENSSBOG00000029393	PYM1	94	93.194	Saimiri_boliviensis_boliviensis
ENSOARG00000010856	PYM1	93	79.365	ENSSHAG00000008280	PYM1	93	79.365	Sarcophilus_harrisii
ENSOARG00000010856	PYM1	93	64.433	ENSSFOG00015021475	pym1	94	59.391	Scleropages_formosus
ENSOARG00000010856	PYM1	99	56.398	ENSSMAG00000020912	pym1	94	57.921	Scophthalmus_maximus
ENSOARG00000010856	PYM1	99	56.682	ENSSDUG00000001807	pym1	94	59.716	Seriola_dumerili
ENSOARG00000010856	PYM1	99	60.488	ENSSLDG00000013730	pym1	94	62.814	Seriola_lalandi_dorsalis
ENSOARG00000010856	PYM1	89	88.889	ENSSARG00000009569	PYM1	94	88.889	Sorex_araneus
ENSOARG00000010856	PYM1	89	64.706	ENSSPUG00000015059	PYM1	90	64.706	Sphenodon_punctatus
ENSOARG00000010856	PYM1	99	57.944	ENSSPAG00000020100	pym1	94	58.654	Stegastes_partitus
ENSOARG00000010856	PYM1	94	94.764	ENSSSCG00000040825	PYM1	94	94.764	Sus_scrofa
ENSOARG00000010856	PYM1	99	60.577	ENSTRUG00000021367	pym1	93	62.245	Takifugu_rubripes
ENSOARG00000010856	PYM1	99	56.039	ENSTNIG00000012534	pym1	92	56.995	Tetraodon_nigroviridis
ENSOARG00000010856	PYM1	89	85.000	ENSTBEG00000004208	PYM1	94	85.000	Tupaia_belangeri
ENSOARG00000010856	PYM1	89	95.028	ENSTTRG00000014971	PYM1	92	95.028	Tursiops_truncatus
ENSOARG00000010856	PYM1	94	92.670	ENSUAMG00000014521	PYM1	94	92.670	Ursus_americanus
ENSOARG00000010856	PYM1	91	90.323	ENSUMAG00000016241	PYM1	85	89.840	Ursus_maritimus
ENSOARG00000010856	PYM1	94	95.288	ENSVVUG00000022749	PYM1	94	95.288	Vulpes_vulpes
ENSOARG00000010856	PYM1	94	60.825	ENSXETG00000021850	pym1	94	62.245	Xenopus_tropicalis
ENSOARG00000010856	PYM1	99	60.465	ENSXMAG00000011649	pym1	93	60.591	Xiphophorus_maculatus