EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000011716 (Gene tree)
Gene ID: 101106122
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 167864 bases
Position: chr21:39083210-39251073
Accession: 101106122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000012561	CPSF_A	PF03178.15	3.6e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000012746	DDB1-201	6891	XM_004019581	ENSOARP00000012561	1151 (aa)	XP_004019630	W5PQ34

Gene Model

Click here to download ENSOARG00000011716's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03420	Nucleotide excision repair	KEGG
oas04120	Ubiquitin mediated proteolysis	KEGG
oas05161	Hepatitis B	KEGG
oas05170	Human immunodeficiency virus 1 infection	KEGG
oas05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000011716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000011716	DDB1	98	99.733	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSOARG00000011716	DDB1	97	91.375	ENSAPOG00000005036	ddb1	99	91.429	Acanthochromis_polyacanthus
ENSOARG00000011716	DDB1	98	99.822	ENSAMEG00000016518	DDB1	99	99.822	Ailuropoda_melanoleuca
ENSOARG00000011716	DDB1	85	91.735	ENSACIG00000020624	ddb1	99	91.735	Amphilophus_citrinellus
ENSOARG00000011716	DDB1	98	91.273	ENSAOCG00000003066	ddb1	99	91.273	Amphiprion_ocellaris
ENSOARG00000011716	DDB1	98	91.362	ENSAPEG00000000092	ddb1	99	91.426	Amphiprion_percula
ENSOARG00000011716	DDB1	93	91.628	ENSATEG00000020571	ddb1	97	91.628	Anabas_testudineus
ENSOARG00000011716	DDB1	96	96.661	ENSAPLG00000007174	DDB1	97	96.661	Anas_platyrhynchos
ENSOARG00000011716	DDB1	98	97.150	ENSACAG00000017758	DDB1	99	97.150	Anolis_carolinensis
ENSOARG00000011716	DDB1	98	99.733	ENSANAG00000021878	DDB1	99	99.733	Aotus_nancymaae
ENSOARG00000011716	DDB1	98	91.630	ENSACLG00000012401	ddb1	99	91.630	Astatotilapia_calliptera
ENSOARG00000011716	DDB1	98	100.000	ENSBTAG00000021569	DDB1	92	100.000	Bos_taurus
ENSOARG00000011716	DDB1	97	37.511	WBGene00010890	ddb-1	98	37.391	Caenorhabditis_elegans
ENSOARG00000011716	DDB1	98	99.733	ENSCJAG00000019319	DDB1	99	99.733	Callithrix_jacchus
ENSOARG00000011716	DDB1	98	99.822	ENSCAFG00000016264	DDB1	99	99.822	Canis_familiaris
ENSOARG00000011716	DDB1	93	99.535	ENSCAFG00020012722	DDB1	99	99.535	Canis_lupus_dingo
ENSOARG00000011716	DDB1	98	100.000	ENSCHIG00000014969	DDB1	99	100.000	Capra_hircus
ENSOARG00000011716	DDB1	98	99.020	ENSTSYG00000008027	DDB1	99	99.020	Carlito_syrichta
ENSOARG00000011716	DDB1	96	99.002	ENSCAPG00000010786	DDB1	98	99.002	Cavia_aperea
ENSOARG00000011716	DDB1	98	99.020	ENSCPOG00000009956	DDB1	99	99.020	Cavia_porcellus
ENSOARG00000011716	DDB1	98	99.733	ENSCCAG00000035883	DDB1	99	99.733	Cebus_capucinus
ENSOARG00000011716	DDB1	98	97.181	ENSCATG00000044495	DDB1	99	97.181	Cercocebus_atys
ENSOARG00000011716	DDB1	98	99.110	ENSCLAG00000004126	DDB1	99	99.110	Chinchilla_lanigera
ENSOARG00000011716	DDB1	98	99.733	ENSCSAG00000006392	DDB1	99	99.733	Chlorocebus_sabaeus
ENSOARG00000011716	DDB1	87	92.803	ENSCHOG00000011377	DDB1	90	92.803	Choloepus_hoffmanni
ENSOARG00000011716	DDB1	98	97.863	ENSCPBG00000017728	DDB1	99	97.863	Chrysemys_picta_bellii
ENSOARG00000011716	DDB1	98	61.674	ENSCING00000007437	-	99	61.586	Ciona_intestinalis
ENSOARG00000011716	DDB1	91	59.981	ENSCSAVG00000004783	-	100	59.929	Ciona_savignyi
ENSOARG00000011716	DDB1	98	99.733	ENSCANG00000019948	DDB1	99	99.733	Colobus_angolensis_palliatus
ENSOARG00000011716	DDB1	98	99.733	ENSCGRG00001016599	Ddb1	99	99.733	Cricetulus_griseus_chok1gshd
ENSOARG00000011716	DDB1	98	99.733	ENSCGRG00000013427	Ddb1	99	99.733	Cricetulus_griseus_crigri
ENSOARG00000011716	DDB1	92	91.140	ENSCSEG00000012499	ddb1	99	89.575	Cynoglossus_semilaevis
ENSOARG00000011716	DDB1	93	91.333	ENSCVAG00000019531	ddb1	99	91.333	Cyprinodon_variegatus
ENSOARG00000011716	DDB1	98	88.444	ENSDARG00000074431	ddb1	99	88.564	Danio_rerio
ENSOARG00000011716	DDB1	93	99.163	ENSDNOG00000014884	DDB1	97	99.163	Dasypus_novemcinctus
ENSOARG00000011716	DDB1	81	100.000	ENSDORG00000000127	Ddb1	98	100.000	Dipodomys_ordii
ENSOARG00000011716	DDB1	97	61.449	FBgn0260962	pic	98	61.235	Drosophila_melanogaster
ENSOARG00000011716	DDB1	69	100.000	ENSETEG00000001053	-	69	100.000	Echinops_telfairi
ENSOARG00000011716	DDB1	77	84.927	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
ENSOARG00000011716	DDB1	98	99.644	ENSEASG00005008184	DDB1	99	99.644	Equus_asinus_asinus
ENSOARG00000011716	DDB1	98	99.555	ENSECAG00000012136	DDB1	99	99.555	Equus_caballus
ENSOARG00000011716	DDB1	84	97.306	ENSEEUG00000003194	DDB1	85	97.306	Erinaceus_europaeus
ENSOARG00000011716	DDB1	98	91.362	ENSELUG00000023868	ddb1	99	91.362	Esox_lucius
ENSOARG00000011716	DDB1	98	99.822	ENSFCAG00000029716	DDB1	99	99.822	Felis_catus
ENSOARG00000011716	DDB1	98	97.069	ENSFALG00000011981	DDB1	99	97.069	Ficedula_albicollis
ENSOARG00000011716	DDB1	98	99.020	ENSFDAG00000005128	DDB1	99	99.020	Fukomys_damarensis
ENSOARG00000011716	DDB1	88	91.597	ENSFHEG00000022133	ddb1	97	91.597	Fundulus_heteroclitus
ENSOARG00000011716	DDB1	78	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSOARG00000011716	DDB1	98	97.240	ENSGALG00000042333	DDB1	99	97.240	Gallus_gallus
ENSOARG00000011716	DDB1	93	91.146	ENSGAFG00000013142	ddb1	99	91.146	Gambusia_affinis
ENSOARG00000011716	DDB1	95	90.559	ENSGACG00000017182	ddb1	100	90.559	Gasterosteus_aculeatus
ENSOARG00000011716	DDB1	93	97.938	ENSGAGG00000014124	DDB1	98	97.938	Gopherus_agassizii
ENSOARG00000011716	DDB1	98	99.733	ENSGGOG00000004052	DDB1	99	99.733	Gorilla_gorilla
ENSOARG00000011716	DDB1	98	91.630	ENSHBUG00000008873	ddb1	99	91.630	Haplochromis_burtoni
ENSOARG00000011716	DDB1	98	98.931	ENSHGLG00000018430	DDB1	99	98.931	Heterocephalus_glaber_female
ENSOARG00000011716	DDB1	98	97.863	ENSHGLG00100014475	DDB1	98	97.863	Heterocephalus_glaber_male
ENSOARG00000011716	DDB1	93	90.892	ENSHCOG00000018670	ddb1	98	90.892	Hippocampus_comes
ENSOARG00000011716	DDB1	98	90.650	ENSIPUG00000005612	DDB1	99	90.650	Ictalurus_punctatus
ENSOARG00000011716	DDB1	98	99.733	ENSSTOG00000007552	DDB1	99	99.733	Ictidomys_tridecemlineatus
ENSOARG00000011716	DDB1	98	99.733	ENSJJAG00000017769	Ddb1	99	99.733	Jaculus_jaculus
ENSOARG00000011716	DDB1	93	91.240	ENSKMAG00000002315	ddb1	99	91.240	Kryptolebias_marmoratus
ENSOARG00000011716	DDB1	84	91.399	ENSLBEG00000017065	ddb1	99	91.399	Labrus_bergylta
ENSOARG00000011716	DDB1	98	93.600	ENSLACG00000017611	DDB1	99	93.600	Latimeria_chalumnae
ENSOARG00000011716	DDB1	90	83.333	ENSLOCG00000000012	ddb1	98	83.333	Lepisosteus_oculatus
ENSOARG00000011716	DDB1	98	99.555	ENSLAFG00000011513	DDB1	99	99.555	Loxodonta_africana
ENSOARG00000011716	DDB1	98	99.733	ENSMFAG00000042035	DDB1	99	99.733	Macaca_fascicularis
ENSOARG00000011716	DDB1	98	99.733	ENSMMUG00000002691	DDB1	99	99.733	Macaca_mulatta
ENSOARG00000011716	DDB1	98	99.733	ENSMNEG00000031559	DDB1	99	99.733	Macaca_nemestrina
ENSOARG00000011716	DDB1	98	99.733	ENSMLEG00000044136	DDB1	99	99.733	Mandrillus_leucophaeus
ENSOARG00000011716	DDB1	98	91.630	ENSMAMG00000014372	ddb1	99	91.630	Mastacembelus_armatus
ENSOARG00000011716	DDB1	98	91.541	ENSMZEG00005013835	ddb1	99	91.541	Maylandia_zebra
ENSOARG00000011716	DDB1	92	96.594	ENSMGAG00000004990	DDB1	98	96.594	Meleagris_gallopavo
ENSOARG00000011716	DDB1	98	99.733	ENSMAUG00000012926	Ddb1	99	99.733	Mesocricetus_auratus
ENSOARG00000011716	DDB1	98	99.733	ENSMICG00000013703	DDB1	99	99.733	Microcebus_murinus
ENSOARG00000011716	DDB1	98	99.466	ENSMOCG00000020499	Ddb1	99	99.466	Microtus_ochrogaster
ENSOARG00000011716	DDB1	85	91.735	ENSMMOG00000001758	ddb1	99	91.735	Mola_mola
ENSOARG00000011716	DDB1	98	89.113	ENSMODG00000020353	DDB1	99	89.113	Monodelphis_domestica
ENSOARG00000011716	DDB1	98	91.630	ENSMALG00000014071	ddb1	99	91.630	Monopterus_albus
ENSOARG00000011716	DDB1	98	99.644	MGP_CAROLIEiJ_G0022695	Ddb1	99	99.644	Mus_caroli
ENSOARG00000011716	DDB1	98	99.555	ENSMUSG00000024740	Ddb1	99	99.555	Mus_musculus
ENSOARG00000011716	DDB1	98	99.644	MGP_PahariEiJ_G0014189	Ddb1	99	99.644	Mus_pahari
ENSOARG00000011716	DDB1	98	99.644	MGP_SPRETEiJ_G0023609	Ddb1	99	99.644	Mus_spretus
ENSOARG00000011716	DDB1	98	96.438	ENSMPUG00000014200	DDB1	98	96.438	Mustela_putorius_furo
ENSOARG00000011716	DDB1	98	99.199	ENSMLUG00000013232	DDB1	99	99.199	Myotis_lucifugus
ENSOARG00000011716	DDB1	98	99.288	ENSNGAG00000009384	Ddb1	99	99.288	Nannospalax_galili
ENSOARG00000011716	DDB1	98	91.719	ENSNBRG00000019581	ddb1	99	91.719	Neolamprologus_brichardi
ENSOARG00000011716	DDB1	98	96.564	ENSNLEG00000002022	DDB1	99	96.564	Nomascus_leucogenys
ENSOARG00000011716	DDB1	89	99.625	ENSMEUG00000001099	DDB1	91	99.625	Notamacropus_eugenii
ENSOARG00000011716	DDB1	88	90.730	ENSOPRG00000008254	DDB1	89	90.730	Ochotona_princeps
ENSOARG00000011716	DDB1	98	98.931	ENSODEG00000002419	DDB1	99	98.931	Octodon_degus
ENSOARG00000011716	DDB1	98	91.630	ENSONIG00000005804	ddb1	99	91.630	Oreochromis_niloticus
ENSOARG00000011716	DDB1	88	98.325	ENSOANG00000004897	DDB1	98	98.325	Ornithorhynchus_anatinus
ENSOARG00000011716	DDB1	98	99.733	ENSOCUG00000001667	DDB1	99	99.733	Oryctolagus_cuniculus
ENSOARG00000011716	DDB1	95	89.826	ENSORLG00000001399	ddb1	98	91.066	Oryzias_latipes
ENSOARG00000011716	DDB1	95	89.734	ENSORLG00020001277	ddb1	97	89.734	Oryzias_latipes_hni
ENSOARG00000011716	DDB1	93	90.884	ENSORLG00015002080	ddb1	99	90.884	Oryzias_latipes_hsok
ENSOARG00000011716	DDB1	95	89.699	ENSOMEG00000006181	ddb1	99	89.699	Oryzias_melastigma
ENSOARG00000011716	DDB1	98	99.733	ENSOGAG00000016103	DDB1	99	99.733	Otolemur_garnettii
ENSOARG00000011716	DDB1	98	99.733	ENSPPAG00000035343	DDB1	99	99.733	Pan_paniscus
ENSOARG00000011716	DDB1	98	99.822	ENSPPRG00000013300	DDB1	99	99.822	Panthera_pardus
ENSOARG00000011716	DDB1	96	99.819	ENSPTIG00000006909	DDB1	97	99.819	Panthera_tigris_altaica
ENSOARG00000011716	DDB1	98	99.733	ENSPTRG00000003737	DDB1	99	99.733	Pan_troglodytes
ENSOARG00000011716	DDB1	98	99.733	ENSPANG00000000242	DDB1	99	99.733	Papio_anubis
ENSOARG00000011716	DDB1	93	91.240	ENSPKIG00000019213	ddb1	94	91.240	Paramormyrops_kingsleyae
ENSOARG00000011716	DDB1	96	97.200	ENSPSIG00000013275	DDB1	98	97.200	Pelodiscus_sinensis
ENSOARG00000011716	DDB1	85	91.429	ENSPMGG00000021179	ddb1	99	91.429	Periophthalmus_magnuspinnatus
ENSOARG00000011716	DDB1	98	99.733	ENSPEMG00000012241	Ddb1	99	99.733	Peromyscus_maniculatus_bairdii
ENSOARG00000011716	DDB1	88	86.739	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSOARG00000011716	DDB1	98	99.020	ENSPCIG00000002643	DDB1	99	99.020	Phascolarctos_cinereus
ENSOARG00000011716	DDB1	98	91.014	ENSPFOG00000002768	ddb1	99	91.014	Poecilia_formosa
ENSOARG00000011716	DDB1	98	90.828	ENSPLAG00000017227	ddb1	99	90.828	Poecilia_latipinna
ENSOARG00000011716	DDB1	98	90.828	ENSPMEG00000011398	ddb1	99	90.828	Poecilia_mexicana
ENSOARG00000011716	DDB1	93	91.256	ENSPREG00000004440	ddb1	98	91.256	Poecilia_reticulata
ENSOARG00000011716	DDB1	98	94.774	ENSPPYG00000003193	DDB1	99	94.774	Pongo_abelii
ENSOARG00000011716	DDB1	82	99.234	ENSPCAG00000011040	DDB1	83	99.234	Procavia_capensis
ENSOARG00000011716	DDB1	98	98.133	ENSPCOG00000015176	DDB1	99	98.133	Propithecus_coquereli
ENSOARG00000011716	DDB1	98	99.644	ENSPVAG00000003847	DDB1	99	99.644	Pteropus_vampyrus
ENSOARG00000011716	DDB1	93	91.240	ENSPNAG00000006635	ddb1	97	91.240	Pygocentrus_nattereri
ENSOARG00000011716	DDB1	98	99.644	ENSRNOG00000020715	Ddb1	99	99.644	Rattus_norvegicus
ENSOARG00000011716	DDB1	98	99.733	ENSRBIG00000033611	DDB1	99	99.733	Rhinopithecus_bieti
ENSOARG00000011716	DDB1	98	99.733	ENSRROG00000041407	DDB1	99	99.733	Rhinopithecus_roxellana
ENSOARG00000011716	DDB1	98	99.644	ENSSBOG00000019775	DDB1	99	99.644	Saimiri_boliviensis_boliviensis
ENSOARG00000011716	DDB1	91	96.961	ENSSHAG00000011600	DDB1	98	96.961	Sarcophilus_harrisii
ENSOARG00000011716	DDB1	93	91.357	ENSSFOG00015011151	ddb1	97	91.357	Scleropages_formosus
ENSOARG00000011716	DDB1	98	91.184	ENSSMAG00000009495	ddb1	99	91.184	Scophthalmus_maximus
ENSOARG00000011716	DDB1	98	91.541	ENSSDUG00000004642	ddb1	99	91.541	Seriola_dumerili
ENSOARG00000011716	DDB1	98	91.541	ENSSLDG00000015804	ddb1	99	91.541	Seriola_lalandi_dorsalis
ENSOARG00000011716	DDB1	69	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSOARG00000011716	DDB1	98	98.041	ENSSPUG00000019338	DDB1	99	98.041	Sphenodon_punctatus
ENSOARG00000011716	DDB1	93	91.535	ENSSPAG00000009888	ddb1	99	91.535	Stegastes_partitus
ENSOARG00000011716	DDB1	98	98.842	ENSSSCG00000013094	DDB1	98	98.842	Sus_scrofa
ENSOARG00000011716	DDB1	98	97.240	ENSTGUG00000006414	DDB1	99	97.240	Taeniopygia_guttata
ENSOARG00000011716	DDB1	93	90.214	ENSTRUG00000016682	ddb1	98	90.214	Takifugu_rubripes
ENSOARG00000011716	DDB1	85	85.076	ENSTNIG00000009565	ddb1	98	85.076	Tetraodon_nigroviridis
ENSOARG00000011716	DDB1	90	95.060	ENSTTRG00000011055	DDB1	92	95.060	Tursiops_truncatus
ENSOARG00000011716	DDB1	93	99.535	ENSUAMG00000017793	DDB1	93	99.535	Ursus_americanus
ENSOARG00000011716	DDB1	93	99.535	ENSUMAG00000011788	DDB1	98	99.535	Ursus_maritimus
ENSOARG00000011716	DDB1	88	100.000	ENSVPAG00000007963	DDB1	90	100.000	Vicugna_pacos
ENSOARG00000011716	DDB1	98	99.733	ENSVVUG00000004987	DDB1	99	99.733	Vulpes_vulpes
ENSOARG00000011716	DDB1	98	93.168	ENSXETG00000008820	ddb1	99	93.168	Xenopus_tropicalis
ENSOARG00000011716	DDB1	85	91.224	ENSXCOG00000013956	ddb1	99	91.224	Xiphophorus_couchianus
ENSOARG00000011716	DDB1	93	91.146	ENSXMAG00000000022	ddb1	99	91.146	Xiphophorus_maculatus