EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOARG00000012005 (Gene tree)
Gene ID
101112673
Gene Symbol
PATL1
Alias
-
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Ovis_aries
Status
putative
Strand
Minus strand
Length
26888 bases
Position
chr15:79803496-79830383
Accession
101112673
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOARP00000012875PAT1PF09770.91.5e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOART00000013063PATL1-2012400XM_004016837ENSOARP00000012875799 (aa)-W5PQZ7
Gene Model
Click here to download ENSOARG00000012005's gene model file
Pathways
Pathway IDPathway NameSource
oas03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000012005's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOARG00000012005PATL15935.381ENSOARG00000003762PATL27236.543
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOARG00000012005PATL19694.256ENSG00000166889PATL19994.256Homo_sapiens
ENSOARG00000012005PATL16134.156ENSG00000229474PATL29936.538Homo_sapiens
ENSOARG00000012005PATL15252.038ENSAPOG00000021290patl19845.932Acanthochromis_polyacanthus
ENSOARG00000012005PATL16633.886ENSAPOG00000022988patl27332.781Acanthochromis_polyacanthus
ENSOARG00000012005PATL16033.126ENSAMEG00000014997PATL27533.738Ailuropoda_melanoleuca
ENSOARG00000012005PATL19694.648ENSAMEG00000014215PATL19994.648Ailuropoda_melanoleuca
ENSOARG00000012005PATL19245.571ENSACIG00000005182patl19846.375Amphilophus_citrinellus
ENSOARG00000012005PATL16633.698ENSAOCG00000023738patl25633.333Amphiprion_ocellaris
ENSOARG00000012005PATL15680.645ENSAPEG00000021391patl18059.375Amphiprion_percula
ENSOARG00000012005PATL16433.077ENSAPEG00000011299patl26832.988Amphiprion_percula
ENSOARG00000012005PATL18578.788ENSATEG00000002230patl18253.086Anabas_testudineus
ENSOARG00000012005PATL16133.925ENSATEG00000019567patl27033.661Anabas_testudineus
ENSOARG00000012005PATL15138.499ENSAPLG00000003980PATL26438.499Anas_platyrhynchos
ENSOARG00000012005PATL16870.471ENSAPLG00000013394PATL19970.492Anas_platyrhynchos
ENSOARG00000012005PATL19679.818ENSACAG00000006607PATL19978.906Anolis_carolinensis
ENSOARG00000012005PATL19694.386ENSANAG00000023078PATL19994.386Aotus_nancymaae
ENSOARG00000012005PATL15961.017ENSACLG00000005144patl18449.466Astatotilapia_calliptera
ENSOARG00000012005PATL18431.268ENSACLG00000010326patl25435.561Astatotilapia_calliptera
ENSOARG00000012005PATL17234.687ENSAMXG00000020293patl26335.146Astyanax_mexicanus
ENSOARG00000012005PATL15252.392ENSAMXG00000010731patl19945.993Astyanax_mexicanus
ENSOARG00000012005PATL19697.520ENSBTAG00000005913PATL19997.520Bos_taurus
ENSOARG00000012005PATL16134.568ENSCJAG00000002379PATL27235.990Callithrix_jacchus
ENSOARG00000012005PATL19694.125ENSCJAG00000016192PATL19993.995Callithrix_jacchus
ENSOARG00000012005PATL19694.909ENSCAFG00000007581PATL19994.909Canis_familiaris
ENSOARG00000012005PATL16233.871ENSCAFG00000013629PATL27235.024Canis_familiaris
ENSOARG00000012005PATL16233.871ENSCAFG00020022169PATL27235.024Canis_lupus_dingo
ENSOARG00000012005PATL19694.503ENSCAFG00020001648PATL19994.868Canis_lupus_dingo
ENSOARG00000012005PATL19698.825ENSCHIG00000025913PATL19998.825Capra_hircus
ENSOARG00000012005PATL16036.550ENSCHIG00000026665PATL27437.292Capra_hircus
ENSOARG00000012005PATL19594.758ENSTSYG00000012748PATL19594.495Carlito_syrichta
ENSOARG00000012005PATL19690.743ENSCAPG00000013668PATL19990.743Cavia_aperea
ENSOARG00000012005PATL19688.408ENSCPOG00000006827PATL19986.752Cavia_porcellus
ENSOARG00000012005PATL19694.517ENSCCAG00000023759PATL19994.517Cebus_capucinus
ENSOARG00000012005PATL16134.497ENSCCAG00000025261PATL27534.793Cebus_capucinus
ENSOARG00000012005PATL19694.648ENSCATG00000009629PATL19994.648Cercocebus_atys
ENSOARG00000012005PATL19689.817ENSCLAG00000003427PATL110089.687Chinchilla_lanigera
ENSOARG00000012005PATL15534.598ENSCLAG00000014407PATL27335.459Chinchilla_lanigera
ENSOARG00000012005PATL18794.397ENSCSAG00000006095PATL110094.397Chlorocebus_sabaeus
ENSOARG00000012005PATL16695.960ENSCHOG00000001611PATL18495.960Choloepus_hoffmanni
ENSOARG00000012005PATL15138.741ENSCPBG00000006150PATL25938.257Chrysemys_picta_bellii
ENSOARG00000012005PATL16133.881ENSCANG00000013856PATL28534.497Colobus_angolensis_palliatus
ENSOARG00000012005PATL19694.517ENSCANG00000039197PATL19996.510Colobus_angolensis_palliatus
ENSOARG00000012005PATL19693.734ENSCGRG00001024927Patl19993.734Cricetulus_griseus_chok1gshd
ENSOARG00000012005PATL19693.734ENSCGRG00000000461Patl110093.734Cricetulus_griseus_crigri
ENSOARG00000012005PATL16033.678ENSCSEG00000009438patl25933.867Cynoglossus_semilaevis
ENSOARG00000012005PATL18576.667ENSCSEG00000008261patl18152.564Cynoglossus_semilaevis
ENSOARG00000012005PATL15831.702ENSCVAG00000016203patl26330.805Cyprinodon_variegatus
ENSOARG00000012005PATL18550.957ENSCVAG00000006664patl19946.105Cyprinodon_variegatus
ENSOARG00000012005PATL16534.652ENSDARG00000089567patl26335.271Danio_rerio
ENSOARG00000012005PATL19246.115ENSDARG00000017423patl19945.665Danio_rerio
ENSOARG00000012005PATL19687.467ENSDNOG00000038865PATL19892.449Dasypus_novemcinctus
ENSOARG00000012005PATL19693.734ENSDORG00000000237Patl19993.734Dipodomys_ordii
ENSOARG00000012005PATL19695.306ENSEASG00005007963PATL19995.306Equus_asinus_asinus
ENSOARG00000012005PATL19695.306ENSECAG00000011411PATL19995.306Equus_caballus
ENSOARG00000012005PATL16633.706ENSELUG00000023244patl25435.407Esox_lucius
ENSOARG00000012005PATL18371.429ENSELUG00000024249patl19945.540Esox_lucius
ENSOARG00000012005PATL19694.909ENSFCAG00000015573PATL19993.995Felis_catus
ENSOARG00000012005PATL16033.608ENSFCAG00000027170PATL27334.058Felis_catus
ENSOARG00000012005PATL19679.948ENSFALG00000012150PATL19978.368Ficedula_albicollis
ENSOARG00000012005PATL15033.831ENSFDAG00000012242PATL27335.176Fukomys_damarensis
ENSOARG00000012005PATL19690.601ENSFDAG00000016128PATL110090.470Fukomys_damarensis
ENSOARG00000012005PATL15967.308ENSFHEG00000017790patl18257.812Fundulus_heteroclitus
ENSOARG00000012005PATL15931.198ENSGMOG00000005666patl29932.775Gadus_morhua
ENSOARG00000012005PATL19577.530ENSGALG00000042641PATL19977.267Gallus_gallus
ENSOARG00000012005PATL18331.744ENSGAFG00000019344patl25535.990Gambusia_affinis
ENSOARG00000012005PATL16158.462ENSGAFG00000006508patl18358.462Gambusia_affinis
ENSOARG00000012005PATL19647.949ENSGACG00000016448patl19949.098Gasterosteus_aculeatus
ENSOARG00000012005PATL19683.203ENSGAGG00000004461PATL110083.668Gopherus_agassizii
ENSOARG00000012005PATL19694.386ENSGGOG00000004335PATL19994.386Gorilla_gorilla
ENSOARG00000012005PATL16134.156ENSGGOG00000025923PATL28534.426Gorilla_gorilla
ENSOARG00000012005PATL15967.308ENSHBUG00000005365patl18349.466Haplochromis_burtoni
ENSOARG00000012005PATL16034.227ENSHBUG00000005929patl26135.561Haplochromis_burtoni
ENSOARG00000012005PATL19690.862ENSHGLG00000018173PATL19990.992Heterocephalus_glaber_female
ENSOARG00000012005PATL19689.426ENSHGLG00100003453PATL110089.556Heterocephalus_glaber_male
ENSOARG00000012005PATL19430.181ENSHCOG00000016754patl25634.180Hippocampus_comes
ENSOARG00000012005PATL19053.521ENSHCOG00000001898patl18153.521Hippocampus_comes
ENSOARG00000012005PATL19594.203ENSSTOG00000013764PATL19994.203Ictidomys_tridecemlineatus
ENSOARG00000012005PATL15735.931ENSSTOG00000033848PATL27236.145Ictidomys_tridecemlineatus
ENSOARG00000012005PATL19692.680ENSJJAG00000010135Patl110092.680Jaculus_jaculus
ENSOARG00000012005PATL15932.845ENSKMAG00000021275patl25433.890Kryptolebias_marmoratus
ENSOARG00000012005PATL15680.000ENSKMAG00000020848patl18252.113Kryptolebias_marmoratus
ENSOARG00000012005PATL15934.728ENSLBEG00000022344patl25833.888Labrus_bergylta
ENSOARG00000012005PATL18869.231ENSLBEG00000023617patl17869.231Labrus_bergylta
ENSOARG00000012005PATL19556.494ENSLACG00000004640PATL19955.829Latimeria_chalumnae
ENSOARG00000012005PATL19247.744ENSLOCG00000000717patl19847.259Lepisosteus_oculatus
ENSOARG00000012005PATL19694.386ENSLAFG00000015161PATL19994.386Loxodonta_africana
ENSOARG00000012005PATL16134.497ENSMFAG00000003565PATL28534.497Macaca_fascicularis
ENSOARG00000012005PATL19694.648ENSMFAG00000040851PATL19994.648Macaca_fascicularis
ENSOARG00000012005PATL19694.648ENSMMUG00000017287PATL19994.648Macaca_mulatta
ENSOARG00000012005PATL19694.648ENSMNEG00000038692PATL19994.648Macaca_nemestrina
ENSOARG00000012005PATL19694.778ENSMLEG00000030044PATL19994.778Mandrillus_leucophaeus
ENSOARG00000012005PATL15834.105ENSMAMG00000013327patl26135.154Mastacembelus_armatus
ENSOARG00000012005PATL18577.419ENSMAMG00000003950patl19846.957Mastacembelus_armatus
ENSOARG00000012005PATL15961.017ENSMZEG00005013404patl18449.466Maylandia_zebra
ENSOARG00000012005PATL18431.268ENSMZEG00005014292patl25435.561Maylandia_zebra
ENSOARG00000012005PATL18977.356ENSMGAG00000003406PATL19976.084Meleagris_gallopavo
ENSOARG00000012005PATL19172.777ENSMAUG00000012059Patl19693.846Mesocricetus_auratus
ENSOARG00000012005PATL19590.826ENSMICG00000004172PATL19796.497Microcebus_murinus
ENSOARG00000012005PATL19693.603ENSMOCG00000010087Patl19993.603Microtus_ochrogaster
ENSOARG00000012005PATL15035.821ENSMOCG00000015367Patl27235.162Microtus_ochrogaster
ENSOARG00000012005PATL15231.818ENSMMOG00000001299patl26030.861Mola_mola
ENSOARG00000012005PATL19644.761ENSMMOG00000013711patl19944.141Mola_mola
ENSOARG00000012005PATL19687.875ENSMODG00000020201PATL19987.875Monodelphis_domestica
ENSOARG00000012005PATL16035.318ENSMODG00000017690PATL27135.280Monodelphis_domestica
ENSOARG00000012005PATL15234.368ENSMALG00000008131patl25233.882Monopterus_albus
ENSOARG00000012005PATL19693.211MGP_CAROLIEiJ_G0022739Patl19993.211Mus_caroli
ENSOARG00000012005PATL19693.342ENSMUSG00000046139Patl19993.342Mus_musculus
ENSOARG00000012005PATL19693.342MGP_PahariEiJ_G0014233Patl19993.342Mus_pahari
ENSOARG00000012005PATL19693.473MGP_SPRETEiJ_G0023652Patl19993.473Mus_spretus
ENSOARG00000012005PATL19695.170ENSMPUG00000014607PATL19995.170Mustela_putorius_furo
ENSOARG00000012005PATL19691.906ENSMLUG00000011169PATL19991.253Myotis_lucifugus
ENSOARG00000012005PATL19693.636ENSNGAG00000003682Patl19993.117Nannospalax_galili
ENSOARG00000012005PATL16034.021ENSNBRG00000011745patl25835.084Neolamprologus_brichardi
ENSOARG00000012005PATL19590.921ENSNLEG00000013081PATL19990.789Nomascus_leucogenys
ENSOARG00000012005PATL16134.568ENSNLEG00000005673PATL28534.077Nomascus_leucogenys
ENSOARG00000012005PATL16191.613ENSMEUG00000009391PATL17591.613Notamacropus_eugenii
ENSOARG00000012005PATL16595.238ENSOPRG00000007963PATL17995.238Ochotona_princeps
ENSOARG00000012005PATL17089.103ENSODEG00000001792PATL19491.608Octodon_degus
ENSOARG00000012005PATL15967.308ENSONIG00000004170patl19947.718Oreochromis_niloticus
ENSOARG00000012005PATL16035.464ENSONIG00000011519patl25435.714Oreochromis_niloticus
ENSOARG00000012005PATL15086.146ENSOANG00000011117-9686.260Ornithorhynchus_anatinus
ENSOARG00000012005PATL15934.526ENSOCUG00000006339PATL27435.500Oryctolagus_cuniculus
ENSOARG00000012005PATL19694.386ENSOCUG00000002156PATL19994.386Oryctolagus_cuniculus
ENSOARG00000012005PATL16233.531ENSORLG00000005780patl26333.465Oryzias_latipes
ENSOARG00000012005PATL16233.597ENSORLG00020016506patl26133.531Oryzias_latipes_hni
ENSOARG00000012005PATL16034.647ENSORLG00015014500patl26333.661Oryzias_latipes_hsok
ENSOARG00000012005PATL18431.176ENSOMEG00000021628patl26234.232Oryzias_melastigma
ENSOARG00000012005PATL19694.778ENSOGAG00000004351PATL19994.778Otolemur_garnettii
ENSOARG00000012005PATL16232.797ENSOGAG00000004709PATL27233.890Otolemur_garnettii
ENSOARG00000012005PATL19694.648ENSPPAG00000034275PATL19994.648Pan_paniscus
ENSOARG00000012005PATL16134.497ENSPPAG00000007221PATL28434.426Pan_paniscus
ENSOARG00000012005PATL16033.402ENSPPRG00000004279PATL27333.816Panthera_pardus
ENSOARG00000012005PATL19694.778ENSPPRG00000020639PATL110093.864Panthera_pardus
ENSOARG00000012005PATL16033.196ENSPTIG00000018964PATL27333.575Panthera_tigris_altaica
ENSOARG00000012005PATL19694.778ENSPTIG00000019298PATL19993.864Panthera_tigris_altaica
ENSOARG00000012005PATL16134.156ENSPTRG00000041536PATL28433.806Pan_troglodytes
ENSOARG00000012005PATL19586.842ENSPTRG00000003697PATL19986.842Pan_troglodytes
ENSOARG00000012005PATL19694.648ENSPANG00000035620PATL19994.648Papio_anubis
ENSOARG00000012005PATL19246.193ENSPKIG00000016224patl19846.972Paramormyrops_kingsleyae
ENSOARG00000012005PATL19881.139ENSPSIG00000016206PATL19781.074Pelodiscus_sinensis
ENSOARG00000012005PATL15237.108ENSPSIG00000017690PATL29536.364Pelodiscus_sinensis
ENSOARG00000012005PATL18553.477ENSPMGG00000002644patl19845.043Periophthalmus_magnuspinnatus
ENSOARG00000012005PATL15734.656ENSPMGG00000014550patl26334.895Periophthalmus_magnuspinnatus
ENSOARG00000012005PATL16034.016ENSPEMG00000016509Patl27035.806Peromyscus_maniculatus_bairdii
ENSOARG00000012005PATL19693.603ENSPEMG00000014215Patl19993.603Peromyscus_maniculatus_bairdii
ENSOARG00000012005PATL16333.333ENSPCIG00000018256PATL27636.139Phascolarctos_cinereus
ENSOARG00000012005PATL19688.266ENSPCIG00000010852PATL19988.266Phascolarctos_cinereus
ENSOARG00000012005PATL19645.838ENSPFOG00000007768patl19947.045Poecilia_formosa
ENSOARG00000012005PATL19430.999ENSPFOG00000007305patl25435.663Poecilia_formosa
ENSOARG00000012005PATL19431.120ENSPLAG00000020713patl25435.663Poecilia_latipinna
ENSOARG00000012005PATL15353.555ENSPLAG00000018465patl17650.681Poecilia_latipinna
ENSOARG00000012005PATL19431.347ENSPMEG00000018942patl25435.663Poecilia_mexicana
ENSOARG00000012005PATL18248.576ENSPMEG00000006555patl17650.681Poecilia_mexicana
ENSOARG00000012005PATL17148.258ENSPREG00000003874patl17049.826Poecilia_reticulata
ENSOARG00000012005PATL19695.039ENSPPYG00000003230PATL19995.039Pongo_abelii
ENSOARG00000012005PATL19694.386ENSPCOG00000020770PATL19994.386Propithecus_coquereli
ENSOARG00000012005PATL15136.232ENSPCOG00000000295PATL29937.363Propithecus_coquereli
ENSOARG00000012005PATL18289.329ENSPVAG00000015239PATL110090.244Pteropus_vampyrus
ENSOARG00000012005PATL17451.662ENSPNYG00000018936patl19551.652Pundamilia_nyererei
ENSOARG00000012005PATL16033.814ENSPNYG00000017381patl26135.084Pundamilia_nyererei
ENSOARG00000012005PATL15935.208ENSPNAG00000002315patl26334.792Pygocentrus_nattereri
ENSOARG00000012005PATL19245.511ENSPNAG00000017907patl19945.181Pygocentrus_nattereri
ENSOARG00000012005PATL19693.081ENSRNOG00000021052Patl19993.081Rattus_norvegicus
ENSOARG00000012005PATL19684.270ENSRBIG00000032263PATL19984.145Rhinopithecus_bieti
ENSOARG00000012005PATL19694.517ENSRROG00000032861PATL19994.517Rhinopithecus_roxellana
ENSOARG00000012005PATL19694.386ENSSBOG00000025195PATL19994.386Saimiri_boliviensis_boliviensis
ENSOARG00000012005PATL19688.817ENSSHAG00000004309PATL19988.817Sarcophilus_harrisii
ENSOARG00000012005PATL18332.496ENSSFOG00015000720patl25536.792Scleropages_formosus
ENSOARG00000012005PATL19244.962ENSSFOG00015009614patl19845.652Scleropages_formosus
ENSOARG00000012005PATL19150.000ENSSMAG00000009482patl18053.425Scophthalmus_maximus
ENSOARG00000012005PATL16233.996ENSSMAG00000017262patl27432.809Scophthalmus_maximus
ENSOARG00000012005PATL18769.231ENSSDUG00000005362patl17859.375Seriola_dumerili
ENSOARG00000012005PATL16034.639ENSSDUG00000022927patl26033.678Seriola_dumerili
ENSOARG00000012005PATL16533.458ENSSLDG00000017922patl25936.298Seriola_lalandi_dorsalis
ENSOARG00000012005PATL18767.308ENSSLDG00000019146patl17857.812Seriola_lalandi_dorsalis
ENSOARG00000012005PATL17797.619ENSSARG00000009600PATL18097.619Sorex_araneus
ENSOARG00000012005PATL19681.356ENSSPUG00000009453PATL19980.574Sphenodon_punctatus
ENSOARG00000012005PATL15933.403ENSSPAG00000004784patl26234.038Stegastes_partitus
ENSOARG00000012005PATL15252.038ENSSPAG00000003187patl19846.354Stegastes_partitus
ENSOARG00000012005PATL19695.431ENSSSCG00000013124PATL19995.431Sus_scrofa
ENSOARG00000012005PATL19679.870ENSTGUG00000006222PATL19978.283Taeniopygia_guttata
ENSOARG00000012005PATL15035.732ENSTGUG00000004619-9836.881Taeniopygia_guttata
ENSOARG00000012005PATL16033.958ENSTRUG00000005647patl26233.542Takifugu_rubripes
ENSOARG00000012005PATL18954.930ENSTRUG00000000709patl19844.252Takifugu_rubripes
ENSOARG00000012005PATL18793.953ENSTBEG00000000796PATL19094.419Tupaia_belangeri
ENSOARG00000012005PATL16996.795ENSTTRG00000009389PATL18496.795Tursiops_truncatus
ENSOARG00000012005PATL16033.814ENSUAMG00000018533PATL27134.300Ursus_americanus
ENSOARG00000012005PATL19694.372ENSUMAG00000018634PATL110094.684Ursus_maritimus
ENSOARG00000012005PATL16034.227ENSUMAG00000007738PATL27134.541Ursus_maritimus
ENSOARG00000012005PATL160100.000ENSVPAG00000009224PATL174100.000Vicugna_pacos
ENSOARG00000012005PATL19694.909ENSVVUG00000016668PATL110094.684Vulpes_vulpes
ENSOARG00000012005PATL16233.871ENSVVUG00000011576PATL27234.783Vulpes_vulpes
ENSOARG00000012005PATL15137.440ENSXETG00000014167patl27535.354Xenopus_tropicalis
ENSOARG00000012005PATL15863.462ENSXCOG00000010808patl19763.462Xiphophorus_couchianus
ENSOARG00000012005PATL15965.385ENSXMAG00000013834patl18355.385Xiphophorus_maculatus

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