EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOARG00000012097 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Ovis_aries
Status
putative
Strand
Minus strand
Length
22069 bases
Position
chr17:62296759-62318827
Accession
101112004
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOARP00000012969RRM_1PF00076.223.5e-2912
ENSOARP00000012969RRM_1PF00076.223.5e-2922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOART00000013158MSI1-2011960XM_004017605ENSOARP00000012969330 (aa)-W5PR91
Gene Model
Click here to download ENSOARG00000012097's gene model file
Pathways
Pathway IDPathway NameSource
oas03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000012097's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOARG00000012097MSI15439.487ENSOARG00000011726DAZAP15439.487
ENSOARG00000012097MSI15141.379ENSOARG00000013612-8641.379
ENSOARG00000012097MSI15042.353ENSOARG00000008025-7042.353
ENSOARG00000012097MSI15032.432ENSOARG00000004268-5332.432
ENSOARG00000012097MSI15040.000ENSOARG00000003965-5340.000
ENSOARG00000012097MSI15042.529ENSOARG00000000579HNRNPD8939.796
ENSOARG00000012097MSI15040.000ENSOARG00000016439-5540.000
ENSOARG00000012097MSI15043.750ENSOARG00000010132HNRNPA2B15640.964
ENSOARG00000012097MSI15138.596ENSOARG00000003049-7638.596
ENSOARG00000012097MSI15038.690ENSOARG00000004416-5438.690
ENSOARG00000012097MSI15034.021ENSOARG00000010657-5034.021
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOARG00000012097MSI110096.061ENSG00000135097MSI19496.061Homo_sapiens
ENSOARG00000012097MSI110082.424ENSAPOG00000023458-9482.424Acanthochromis_polyacanthus
ENSOARG00000012097MSI110083.030ENSAPOG00000003191MSI19483.030Acanthochromis_polyacanthus
ENSOARG00000012097MSI110078.740ENSAMEG00000013302MSI110078.740Ailuropoda_melanoleuca
ENSOARG00000012097MSI19678.864ENSACIG00000017754-7878.864Amphilophus_citrinellus
ENSOARG00000012097MSI110083.030ENSAOCG00000003804MSI19483.030Amphiprion_ocellaris
ENSOARG00000012097MSI110076.970ENSAOCG00000009031-9576.970Amphiprion_ocellaris
ENSOARG00000012097MSI110083.030ENSAPEG00000003245MSI19483.030Amphiprion_percula
ENSOARG00000012097MSI110082.424ENSAPEG00000006857-7982.424Amphiprion_percula
ENSOARG00000012097MSI110080.363ENSATEG00000023779-9380.363Anabas_testudineus
ENSOARG00000012097MSI110082.121ENSATEG00000017059MSI19582.121Anabas_testudineus
ENSOARG00000012097MSI110093.939ENSACAG00000002762MSI19493.939Anolis_carolinensis
ENSOARG00000012097MSI110096.061ENSANAG00000027151MSI19496.061Aotus_nancymaae
ENSOARG00000012097MSI18191.353ENSANAG00000027901-8691.353Aotus_nancymaae
ENSOARG00000012097MSI110082.121ENSACLG00000000117-10082.121Astatotilapia_calliptera
ENSOARG00000012097MSI110081.818ENSACLG00000011230MSI19481.818Astatotilapia_calliptera
ENSOARG00000012097MSI110081.212ENSAMXG00000038960msi17681.212Astyanax_mexicanus
ENSOARG00000012097MSI110096.061ENSBTAG00000009800MSI110096.061Bos_taurus
ENSOARG00000012097MSI110096.061ENSCJAG00000008578MSI19496.061Callithrix_jacchus
ENSOARG00000012097MSI110095.758ENSCAFG00000010283MSI19495.758Canis_familiaris
ENSOARG00000012097MSI110095.833ENSCAFG00020020585MSI110095.833Canis_lupus_dingo
ENSOARG00000012097MSI110090.208ENSCHIG00000024304MSI19890.208Capra_hircus
ENSOARG00000012097MSI110096.037ENSTSYG00000033949MSI19596.037Carlito_syrichta
ENSOARG00000012097MSI110095.255ENSCAPG00000003919MSI17895.255Cavia_aperea
ENSOARG00000012097MSI110096.061ENSCPOG00000012361MSI110096.061Cavia_porcellus
ENSOARG00000012097MSI110096.061ENSCCAG00000035567MSI19496.061Cebus_capucinus
ENSOARG00000012097MSI110096.061ENSCATG00000030019MSI19496.061Cercocebus_atys
ENSOARG00000012097MSI110096.061ENSCLAG00000011329MSI110096.061Chinchilla_lanigera
ENSOARG00000012097MSI17396.694ENSCSAG00000002265MSI18896.694Chlorocebus_sabaeus
ENSOARG00000012097MSI110093.030ENSCPBG00000011349MSI19493.030Chrysemys_picta_bellii
ENSOARG00000012097MSI110096.049ENSCANG00000040651MSI110096.049Colobus_angolensis_palliatus
ENSOARG00000012097MSI110096.061ENSCGRG00001018883Msi19496.061Cricetulus_griseus_chok1gshd
ENSOARG00000012097MSI110096.061ENSCGRG00000002191Msi17296.061Cricetulus_griseus_crigri
ENSOARG00000012097MSI110075.152ENSCSEG00000011032MSI110075.152Cynoglossus_semilaevis
ENSOARG00000012097MSI110082.424ENSCSEG00000005834-9482.424Cynoglossus_semilaevis
ENSOARG00000012097MSI110080.909ENSCSEG00000008352-9480.909Cynoglossus_semilaevis
ENSOARG00000012097MSI110082.727ENSCVAG00000009100MSI19482.727Cyprinodon_variegatus
ENSOARG00000012097MSI17065.086ENSCVAG00000017463-8965.086Cyprinodon_variegatus
ENSOARG00000012097MSI110078.723ENSDARG00000010710msi110081.140Danio_rerio
ENSOARG00000012097MSI18878.261ENSDARG00000102015CABZ01037298.18978.261Danio_rerio
ENSOARG00000012097MSI110086.970ENSDNOG00000005713MSI19186.970Dasypus_novemcinctus
ENSOARG00000012097MSI110096.061ENSDORG00000005610Msi19396.061Dipodomys_ordii
ENSOARG00000012097MSI110092.097ENSETEG00000004756MSI110092.097Echinops_telfairi
ENSOARG00000012097MSI110096.061ENSEASG00005004736MSI19496.061Equus_asinus_asinus
ENSOARG00000012097MSI110096.061ENSECAG00000017526MSI19496.061Equus_caballus
ENSOARG00000012097MSI110078.182ENSELUG00000023280-10076.667Esox_lucius
ENSOARG00000012097MSI110076.857ENSELUG00000023219MSI19276.857Esox_lucius
ENSOARG00000012097MSI110096.061ENSFCAG00000011007MSI19496.061Felis_catus
ENSOARG00000012097MSI110092.628ENSFALG00000007574MSI110092.628Ficedula_albicollis
ENSOARG00000012097MSI110095.745ENSFDAG00000019586MSI110095.745Fukomys_damarensis
ENSOARG00000012097MSI110082.727ENSFHEG00000003560-9482.727Fundulus_heteroclitus
ENSOARG00000012097MSI110082.727ENSFHEG00000022446MSI19482.727Fundulus_heteroclitus
ENSOARG00000012097MSI110074.848ENSGMOG00000017838-9074.848Gadus_morhua
ENSOARG00000012097MSI110080.606ENSGMOG00000001006MSI19479.091Gadus_morhua
ENSOARG00000012097MSI110091.606ENSGALG00000007227MSI19384.078Gallus_gallus
ENSOARG00000012097MSI110082.424ENSGAFG00000021522MSI19482.424Gambusia_affinis
ENSOARG00000012097MSI110065.861ENSGAFG00000005860-8965.861Gambusia_affinis
ENSOARG00000012097MSI110081.212ENSGACG00000012679MSI19481.212Gasterosteus_aculeatus
ENSOARG00000012097MSI110078.788ENSGACG00000008674-9478.788Gasterosteus_aculeatus
ENSOARG00000012097MSI110093.030ENSGAGG00000016037MSI19493.030Gopherus_agassizii
ENSOARG00000012097MSI110095.873ENSGGOG00000010328MSI110095.873Gorilla_gorilla
ENSOARG00000012097MSI110082.121ENSHBUG00000011841-9482.121Haplochromis_burtoni
ENSOARG00000012097MSI110081.818ENSHBUG00000021921MSI19481.818Haplochromis_burtoni
ENSOARG00000012097MSI110095.758ENSHGLG00000012782MSI19495.758Heterocephalus_glaber_female
ENSOARG00000012097MSI110095.745ENSHGLG00100016848MSI110095.745Heterocephalus_glaber_male
ENSOARG00000012097MSI110081.212ENSHCOG00000012067-8981.212Hippocampus_comes
ENSOARG00000012097MSI110077.879ENSHCOG00000012019MSI110077.879Hippocampus_comes
ENSOARG00000012097MSI110080.606ENSIPUG00000001976msi19976.970Ictalurus_punctatus
ENSOARG00000012097MSI110095.833ENSSTOG00000009799MSI110095.833Ictidomys_tridecemlineatus
ENSOARG00000012097MSI110096.061ENSJJAG00000010463Msi19496.061Jaculus_jaculus
ENSOARG00000012097MSI110081.818ENSJJAG00000010643-9481.515Jaculus_jaculus
ENSOARG00000012097MSI110080.606ENSKMAG00000019877-10080.606Kryptolebias_marmoratus
ENSOARG00000012097MSI110082.121ENSKMAG00000011251MSI19482.121Kryptolebias_marmoratus
ENSOARG00000012097MSI110082.121ENSLBEG00000001375-9482.121Labrus_bergylta
ENSOARG00000012097MSI110081.818ENSLBEG00000008789MSI19481.818Labrus_bergylta
ENSOARG00000012097MSI110083.939ENSLACG00000018287MSI110083.939Latimeria_chalumnae
ENSOARG00000012097MSI110085.542ENSLAFG00000009412MSI110085.542Loxodonta_africana
ENSOARG00000012097MSI110096.061ENSMFAG00000001798MSI110096.061Macaca_fascicularis
ENSOARG00000012097MSI110096.061ENSMMUG00000031527MSI19696.061Macaca_mulatta
ENSOARG00000012097MSI110096.061ENSMNEG00000040034MSI19496.061Macaca_nemestrina
ENSOARG00000012097MSI110096.049ENSMLEG00000003921MSI110096.049Mandrillus_leucophaeus
ENSOARG00000012097MSI110083.030ENSMAMG00000018426-9483.030Mastacembelus_armatus
ENSOARG00000012097MSI110081.818ENSMAMG00000002279MSI19481.818Mastacembelus_armatus
ENSOARG00000012097MSI110082.121ENSMZEG00005000340-9482.121Maylandia_zebra
ENSOARG00000012097MSI110081.818ENSMZEG00005026892MSI19481.818Maylandia_zebra
ENSOARG00000012097MSI16398.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSOARG00000012097MSI170100.000ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSOARG00000012097MSI110096.061ENSMICG00000033181MSI19496.061Microcebus_murinus
ENSOARG00000012097MSI110095.758ENSMOCG00000002286Msi19495.758Microtus_ochrogaster
ENSOARG00000012097MSI110075.152ENSMMOG00000010492MSI19675.152Mola_mola
ENSOARG00000012097MSI110079.697ENSMMOG00000012265-9679.697Mola_mola
ENSOARG00000012097MSI110066.366ENSMODG00000003189-10066.366Monodelphis_domestica
ENSOARG00000012097MSI110082.121ENSMALG00000017889MSI19482.121Monopterus_albus
ENSOARG00000012097MSI110082.121ENSMALG00000001426-10082.121Monopterus_albus
ENSOARG00000012097MSI110095.455MGP_CAROLIEiJ_G0027626Msi19495.455Mus_caroli
ENSOARG00000012097MSI110095.455ENSMUSG00000054256Msi19993.030Mus_musculus
ENSOARG00000012097MSI110095.455MGP_PahariEiJ_G0024206Msi19495.455Mus_pahari
ENSOARG00000012097MSI110095.455MGP_SPRETEiJ_G0028624Msi19495.455Mus_spretus
ENSOARG00000012097MSI110095.833ENSMPUG00000003168MSI110095.833Mustela_putorius_furo
ENSOARG00000012097MSI110086.905ENSMLUG00000010313MSI110086.905Myotis_lucifugus
ENSOARG00000012097MSI110096.061ENSNGAG00000014508Msi19196.061Nannospalax_galili
ENSOARG00000012097MSI110082.121ENSNBRG00000000841-9482.121Neolamprologus_brichardi
ENSOARG00000012097MSI19773.643ENSNBRG00000018012MSI19973.643Neolamprologus_brichardi
ENSOARG00000012097MSI19985.714ENSNLEG00000015636MSI110085.714Nomascus_leucogenys
ENSOARG00000012097MSI110073.860ENSMEUG00000015759MSI110073.860Notamacropus_eugenii
ENSOARG00000012097MSI19687.975ENSOPRG00000016879MSI110087.975Ochotona_princeps
ENSOARG00000012097MSI110096.049ENSODEG00000006328MSI110096.049Octodon_degus
ENSOARG00000012097MSI110082.121ENSONIG00000011182MSI19482.121Oreochromis_niloticus
ENSOARG00000012097MSI110082.424ENSONIG00000019452-9482.424Oreochromis_niloticus
ENSOARG00000012097MSI110095.513ENSOCUG00000027716MSI110095.513Oryctolagus_cuniculus
ENSOARG00000012097MSI110082.424ENSORLG00000019978-9482.424Oryzias_latipes
ENSOARG00000012097MSI110083.030ENSORLG00000029593MSI19483.030Oryzias_latipes
ENSOARG00000012097MSI110082.424ENSORLG00020001208-6782.424Oryzias_latipes_hni
ENSOARG00000012097MSI110083.030ENSORLG00020008266MSI19980.000Oryzias_latipes_hni
ENSOARG00000012097MSI110083.030ENSORLG00015003916MSI19980.000Oryzias_latipes_hsok
ENSOARG00000012097MSI110082.424ENSORLG00015013672-7178.788Oryzias_latipes_hsok
ENSOARG00000012097MSI110082.424ENSOMEG00000017536MSI110079.394Oryzias_melastigma
ENSOARG00000012097MSI110083.939ENSOMEG00000002272-9783.939Oryzias_melastigma
ENSOARG00000012097MSI110095.783ENSOGAG00000003847MSI19895.783Otolemur_garnettii
ENSOARG00000012097MSI110096.049ENSPPAG00000043073MSI110096.049Pan_paniscus
ENSOARG00000012097MSI110096.061ENSPPRG00000000370MSI19496.061Panthera_pardus
ENSOARG00000012097MSI110095.833ENSPTIG00000008913MSI110095.833Panthera_tigris_altaica
ENSOARG00000012097MSI110096.061ENSPTRG00000005531MSI19496.061Pan_troglodytes
ENSOARG00000012097MSI110095.758ENSPANG00000006335MSI19495.758Papio_anubis
ENSOARG00000012097MSI110082.424ENSPKIG00000023575-9482.424Paramormyrops_kingsleyae
ENSOARG00000012097MSI110083.333ENSPKIG00000016497MSI19483.333Paramormyrops_kingsleyae
ENSOARG00000012097MSI18889.130ENSPSIG00000009621-10089.130Pelodiscus_sinensis
ENSOARG00000012097MSI110090.000ENSPSIG00000011608-9390.000Pelodiscus_sinensis
ENSOARG00000012097MSI110068.976ENSPMGG00000007743-9168.072Periophthalmus_magnuspinnatus
ENSOARG00000012097MSI19678.233ENSPMGG00000000514MSI19778.233Periophthalmus_magnuspinnatus
ENSOARG00000012097MSI110095.758ENSPEMG00000010491Msi19395.758Peromyscus_maniculatus_bairdii
ENSOARG00000012097MSI110082.727ENSPFOG00000008319-8182.727Poecilia_formosa
ENSOARG00000012097MSI110082.424ENSPFOG00000013113MSI19482.424Poecilia_formosa
ENSOARG00000012097MSI110082.424ENSPLAG00000014025-9482.424Poecilia_latipinna
ENSOARG00000012097MSI110082.727ENSPLAG00000012431-9182.727Poecilia_latipinna
ENSOARG00000012097MSI110082.424ENSPMEG00000012796MSI19482.424Poecilia_mexicana
ENSOARG00000012097MSI110082.424ENSPMEG00000007025-9377.576Poecilia_mexicana
ENSOARG00000012097MSI110079.697ENSPREG00000021416-9479.697Poecilia_reticulata
ENSOARG00000012097MSI16874.222ENSPREG00000014574-10074.222Poecilia_reticulata
ENSOARG00000012097MSI110096.061ENSPPYG00000005027MSI19496.061Pongo_abelii
ENSOARG00000012097MSI17795.431ENSPCAG00000002300MSI17295.431Procavia_capensis
ENSOARG00000012097MSI110096.061ENSPCOG00000017341MSI19496.061Propithecus_coquereli
ENSOARG00000012097MSI110079.027ENSPVAG00000002225MSI110079.027Pteropus_vampyrus
ENSOARG00000012097MSI110082.121ENSPNYG00000002529-9482.121Pundamilia_nyererei
ENSOARG00000012097MSI110081.818ENSPNYG00000004379MSI19481.818Pundamilia_nyererei
ENSOARG00000012097MSI110080.909ENSPNAG00000019337msi19480.909Pygocentrus_nattereri
ENSOARG00000012097MSI110095.513ENSRNOG00000001156Msi110095.513Rattus_norvegicus
ENSOARG00000012097MSI110096.061ENSRBIG00000036889MSI110095.833Rhinopithecus_bieti
ENSOARG00000012097MSI110096.061ENSRROG00000041076MSI19396.061Rhinopithecus_roxellana
ENSOARG00000012097MSI110096.061ENSSBOG00000030259MSI19896.061Saimiri_boliviensis_boliviensis
ENSOARG00000012097MSI110083.660ENSSHAG00000006834MSI110083.660Sarcophilus_harrisii
ENSOARG00000012097MSI110083.636ENSSFOG00015014964-9583.636Scleropages_formosus
ENSOARG00000012097MSI110084.545ENSSFOG00015005350MSI19684.545Scleropages_formosus
ENSOARG00000012097MSI110078.788ENSSMAG00000018824MSI19778.788Scophthalmus_maximus
ENSOARG00000012097MSI110082.609ENSSMAG00000009156-7182.609Scophthalmus_maximus
ENSOARG00000012097MSI110082.121ENSSDUG00000001027MSI19482.121Seriola_dumerili
ENSOARG00000012097MSI110082.424ENSSDUG00000022697-9482.424Seriola_dumerili
ENSOARG00000012097MSI110080.000ENSSLDG00000018706-9680.000Seriola_lalandi_dorsalis
ENSOARG00000012097MSI110082.121ENSSLDG00000016832MSI19482.121Seriola_lalandi_dorsalis
ENSOARG00000012097MSI110092.424ENSSPUG00000015741MSI110092.424Sphenodon_punctatus
ENSOARG00000012097MSI110082.727ENSSPAG00000013098-10082.727Stegastes_partitus
ENSOARG00000012097MSI16866.667ENSSPAG00000014085-10066.667Stegastes_partitus
ENSOARG00000012097MSI110095.758ENSSSCG00000029365MSI110095.513Sus_scrofa
ENSOARG00000012097MSI110093.636ENSTGUG00000009534MSI110093.636Taeniopygia_guttata
ENSOARG00000012097MSI18977.155ENSTRUG00000016249MSI110070.522Takifugu_rubripes
ENSOARG00000012097MSI110076.364ENSTRUG00000015636-7976.364Takifugu_rubripes
ENSOARG00000012097MSI110077.477ENSTNIG00000011469MSI19477.477Tetraodon_nigroviridis
ENSOARG00000012097MSI110058.601ENSTNIG00000019814-9558.601Tetraodon_nigroviridis
ENSOARG00000012097MSI110087.956ENSTBEG00000007182MSI110087.956Tupaia_belangeri
ENSOARG00000012097MSI17796.443ENSTTRG00000005663MSI17896.443Tursiops_truncatus
ENSOARG00000012097MSI17192.694ENSUAMG00000015514MSI19492.694Ursus_americanus
ENSOARG00000012097MSI110088.013ENSUMAG00000006176MSI19088.013Ursus_maritimus
ENSOARG00000012097MSI110096.061ENSVVUG00000020993MSI110095.758Vulpes_vulpes
ENSOARG00000012097MSI110088.485ENSXETG00000012216msi19589.759Xenopus_tropicalis
ENSOARG00000012097MSI110068.485ENSXCOG00000017605MSI18968.485Xiphophorus_couchianus
ENSOARG00000012097MSI110082.727ENSXMAG00000018237-9482.727Xiphophorus_maculatus
ENSOARG00000012097MSI110082.727ENSXMAG00000027103MSI18976.133Xiphophorus_maculatus

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