EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000012238 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 9968 bases
Position: chr21:28788683-28798650
Accession: 101118235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000013119	PseudoU_synth_2	PF00849.22	7.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000013310	RPUSD4-201	1137	XM_004019826	ENSOARP00000013119	379 (aa)	-	W5PRP0

Gene Model

Click here to download ENSOARG00000012238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000012238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000012238	RPUSD4	71	31.359	ENSOARG00000005928	RPUSD3	78	31.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000012238	RPUSD4	99	77.249	ENSG00000165526	RPUSD4	98	78.378	Homo_sapiens
ENSOARG00000012238	RPUSD4	87	51.039	ENSAPOG00000011024	rpusd4	82	51.988	Acanthochromis_polyacanthus
ENSOARG00000012238	RPUSD4	99	80.423	ENSAMEG00000000127	-	98	81.351	Ailuropoda_melanoleuca
ENSOARG00000012238	RPUSD4	67	74.775	ENSAMEG00000005953	-	100	74.775	Ailuropoda_melanoleuca
ENSOARG00000012238	RPUSD4	90	48.127	ENSACIG00000003533	rpusd4	99	48.127	Amphilophus_citrinellus
ENSOARG00000012238	RPUSD4	87	51.488	ENSAOCG00000015409	rpusd4	81	52.294	Amphiprion_ocellaris
ENSOARG00000012238	RPUSD4	87	51.488	ENSAPEG00000018935	rpusd4	81	52.294	Amphiprion_percula
ENSOARG00000012238	RPUSD4	83	52.294	ENSATEG00000008059	rpusd4	81	52.294	Anabas_testudineus
ENSOARG00000012238	RPUSD4	73	59.857	ENSAPLG00000013250	RPUSD4	99	58.983	Anas_platyrhynchos
ENSOARG00000012238	RPUSD4	94	58.402	ENSACAG00000000189	RPUSD4	93	60.294	Anolis_carolinensis
ENSOARG00000012238	RPUSD4	96	79.670	ENSANAG00000024050	RPUSD4	97	79.670	Aotus_nancymaae
ENSOARG00000012238	RPUSD4	84	51.235	ENSACLG00000020996	rpusd4	83	51.235	Astatotilapia_calliptera
ENSOARG00000012238	RPUSD4	93	48.138	ENSAMXG00000031479	rpusd4	94	51.952	Astyanax_mexicanus
ENSOARG00000012238	RPUSD4	98	96.486	ENSBTAG00000020900	RPUSD4	98	96.486	Bos_taurus
ENSOARG00000012238	RPUSD4	96	79.508	ENSCJAG00000042850	RPUSD4	92	79.508	Callithrix_jacchus
ENSOARG00000012238	RPUSD4	99	78.628	ENSCAFG00000010488	RPUSD4	98	79.245	Canis_familiaris
ENSOARG00000012238	RPUSD4	99	78.628	ENSCAFG00020010621	RPUSD4	98	79.245	Canis_lupus_dingo
ENSOARG00000012238	RPUSD4	100	98.153	ENSCHIG00000009975	RPUSD4	100	98.153	Capra_hircus
ENSOARG00000012238	RPUSD4	99	79.841	ENSTSYG00000008456	RPUSD4	98	80.759	Carlito_syrichta
ENSOARG00000012238	RPUSD4	66	76.190	ENSCAPG00000006040	RPUSD4	98	76.190	Cavia_aperea
ENSOARG00000012238	RPUSD4	96	79.396	ENSCPOG00000014971	RPUSD4	96	79.339	Cavia_porcellus
ENSOARG00000012238	RPUSD4	96	80.220	ENSCCAG00000027838	RPUSD4	97	80.220	Cebus_capucinus
ENSOARG00000012238	RPUSD4	97	78.649	ENSCATG00000041570	RPUSD4	98	78.649	Cercocebus_atys
ENSOARG00000012238	RPUSD4	96	81.096	ENSCLAG00000016553	RPUSD4	96	81.267	Chinchilla_lanigera
ENSOARG00000012238	RPUSD4	97	78.378	ENSCSAG00000002274	RPUSD4	98	78.378	Chlorocebus_sabaeus
ENSOARG00000012238	RPUSD4	75	79.859	ENSCHOG00000010249	RPUSD4	100	79.859	Choloepus_hoffmanni
ENSOARG00000012238	RPUSD4	75	65.734	ENSCPBG00000011175	RPUSD4	99	65.734	Chrysemys_picta_bellii
ENSOARG00000012238	RPUSD4	71	42.446	ENSCSAVG00000000872	-	54	42.446	Ciona_savignyi
ENSOARG00000012238	RPUSD4	97	77.838	ENSCANG00000039684	RPUSD4	98	77.838	Colobus_angolensis_palliatus
ENSOARG00000012238	RPUSD4	98	76.944	ENSCGRG00001024141	Rpusd4	98	77.297	Cricetulus_griseus_chok1gshd
ENSOARG00000012238	RPUSD4	98	76.944	ENSCGRG00000014415	Rpusd4	98	77.297	Cricetulus_griseus_crigri
ENSOARG00000012238	RPUSD4	86	50.000	ENSCVAG00000008761	rpusd4	83	50.307	Cyprinodon_variegatus
ENSOARG00000012238	RPUSD4	87	49.565	ENSCVAG00000000392	rpusd4	92	50.613	Cyprinodon_variegatus
ENSOARG00000012238	RPUSD4	85	49.538	ENSDARG00000012674	rpusd4	91	49.846	Danio_rerio
ENSOARG00000012238	RPUSD4	99	75.132	ENSDNOG00000020026	RPUSD4	98	75.946	Dasypus_novemcinctus
ENSOARG00000012238	RPUSD4	99	77.249	ENSDORG00000016717	Rpusd4	98	78.649	Dipodomys_ordii
ENSOARG00000012238	RPUSD4	96	77.624	ENSETEG00000013953	RPUSD4	96	77.624	Echinops_telfairi
ENSOARG00000012238	RPUSD4	99	83.069	ENSEASG00005022982	RPUSD4	98	83.514	Equus_asinus_asinus
ENSOARG00000012238	RPUSD4	99	82.804	ENSECAG00000000557	RPUSD4	98	83.243	Equus_caballus
ENSOARG00000012238	RPUSD4	79	78.421	ENSEEUG00000014036	RPUSD4	79	78.421	Erinaceus_europaeus
ENSOARG00000012238	RPUSD4	88	52.890	ENSELUG00000008075	rpusd4	87	53.731	Esox_lucius
ENSOARG00000012238	RPUSD4	100	78.684	ENSFCAG00000029789	RPUSD4	98	80.270	Felis_catus
ENSOARG00000012238	RPUSD4	88	57.910	ENSFALG00000005171	RPUSD4	95	59.133	Ficedula_albicollis
ENSOARG00000012238	RPUSD4	99	77.513	ENSFDAG00000014307	RPUSD4	97	79.063	Fukomys_damarensis
ENSOARG00000012238	RPUSD4	88	50.888	ENSFHEG00000004329	rpusd4	84	51.682	Fundulus_heteroclitus
ENSOARG00000012238	RPUSD4	85	50.462	ENSGMOG00000017726	rpusd4	96	50.462	Gadus_morhua
ENSOARG00000012238	RPUSD4	73	63.082	ENSGALG00000024326	RPUSD4	92	59.091	Gallus_gallus
ENSOARG00000012238	RPUSD4	88	46.957	ENSGAFG00000021559	rpusd4	81	48.113	Gambusia_affinis
ENSOARG00000012238	RPUSD4	87	48.512	ENSGACG00000001657	rpusd4	99	49.655	Gasterosteus_aculeatus
ENSOARG00000012238	RPUSD4	87	63.142	ENSGAGG00000000132	RPUSD4	89	63.354	Gopherus_agassizii
ENSOARG00000012238	RPUSD4	99	77.249	ENSGGOG00000016494	RPUSD4	98	78.378	Gorilla_gorilla
ENSOARG00000012238	RPUSD4	84	51.235	ENSHBUG00000022838	rpusd4	83	51.235	Haplochromis_burtoni
ENSOARG00000012238	RPUSD4	99	78.042	ENSHGLG00000002285	RPUSD4	97	78.862	Heterocephalus_glaber_female
ENSOARG00000012238	RPUSD4	99	78.042	ENSHGLG00100006385	RPUSD4	97	78.862	Heterocephalus_glaber_male
ENSOARG00000012238	RPUSD4	86	50.904	ENSHCOG00000006612	rpusd4	84	50.904	Hippocampus_comes
ENSOARG00000012238	RPUSD4	92	50.565	ENSIPUG00000023879	rusd4	85	53.049	Ictalurus_punctatus
ENSOARG00000012238	RPUSD4	96	80.495	ENSSTOG00000025280	RPUSD4	98	81.461	Ictidomys_tridecemlineatus
ENSOARG00000012238	RPUSD4	95	79.076	ENSJJAG00000018673	Rpusd4	99	79.076	Jaculus_jaculus
ENSOARG00000012238	RPUSD4	94	50.411	ENSKMAG00000021805	rpusd4	85	51.807	Kryptolebias_marmoratus
ENSOARG00000012238	RPUSD4	82	52.484	ENSLBEG00000020394	rpusd4	90	52.484	Labrus_bergylta
ENSOARG00000012238	RPUSD4	85	61.610	ENSLACG00000011028	RPUSD4	82	61.610	Latimeria_chalumnae
ENSOARG00000012238	RPUSD4	84	49.693	ENSLOCG00000003124	rpusd4	86	49.080	Lepisosteus_oculatus
ENSOARG00000012238	RPUSD4	97	78.320	ENSLAFG00000005211	RPUSD4	98	78.320	Loxodonta_africana
ENSOARG00000012238	RPUSD4	97	78.649	ENSMFAG00000039513	RPUSD4	98	78.649	Macaca_fascicularis
ENSOARG00000012238	RPUSD4	97	78.378	ENSMMUG00000007933	RPUSD4	98	78.378	Macaca_mulatta
ENSOARG00000012238	RPUSD4	97	78.649	ENSMNEG00000027414	RPUSD4	98	78.649	Macaca_nemestrina
ENSOARG00000012238	RPUSD4	97	78.378	ENSMLEG00000042461	RPUSD4	98	78.378	Mandrillus_leucophaeus
ENSOARG00000012238	RPUSD4	85	48.936	ENSMAMG00000023839	rpusd4	85	48.936	Mastacembelus_armatus
ENSOARG00000012238	RPUSD4	84	51.235	ENSMZEG00005011999	rpusd4	83	51.235	Maylandia_zebra
ENSOARG00000012238	RPUSD4	73	61.733	ENSMGAG00000000840	RPUSD4	99	58.567	Meleagris_gallopavo
ENSOARG00000012238	RPUSD4	98	76.819	ENSMAUG00000010280	Rpusd4	98	76.757	Mesocricetus_auratus
ENSOARG00000012238	RPUSD4	99	79.630	ENSMICG00000015979	RPUSD4	98	80.541	Microcebus_murinus
ENSOARG00000012238	RPUSD4	97	74.659	ENSMOCG00000000661	Rpusd4	96	74.725	Microtus_ochrogaster
ENSOARG00000012238	RPUSD4	78	54.515	ENSMMOG00000021731	rpusd4	88	54.515	Mola_mola
ENSOARG00000012238	RPUSD4	87	73.556	ENSMODG00000004521	RPUSD4	84	73.556	Monodelphis_domestica
ENSOARG00000012238	RPUSD4	79	51.316	ENSMALG00000005839	rpusd4	97	49.689	Monopterus_albus
ENSOARG00000012238	RPUSD4	98	75.202	MGP_CAROLIEiJ_G0031954	Rpusd4	95	77.159	Mus_caroli
ENSOARG00000012238	RPUSD4	96	76.164	ENSMUSG00000032044	Rpusd4	93	78.187	Mus_musculus
ENSOARG00000012238	RPUSD4	98	76.819	MGP_PahariEiJ_G0014819	Rpusd4	95	78.552	Mus_pahari
ENSOARG00000012238	RPUSD4	93	78.470	MGP_SPRETEiJ_G0033078	Rpusd4	93	78.470	Mus_spretus
ENSOARG00000012238	RPUSD4	99	78.989	ENSMPUG00000006608	RPUSD4	97	80.109	Mustela_putorius_furo
ENSOARG00000012238	RPUSD4	90	82.405	ENSMLUG00000017328	-	94	81.461	Myotis_lucifugus
ENSOARG00000012238	RPUSD4	67	80.709	ENSMLUG00000029348	-	100	80.709	Myotis_lucifugus
ENSOARG00000012238	RPUSD4	98	77.628	ENSNGAG00000020847	Rpusd4	96	78.297	Nannospalax_galili
ENSOARG00000012238	RPUSD4	84	52.308	ENSNBRG00000005207	rpusd4	94	51.543	Neolamprologus_brichardi
ENSOARG00000012238	RPUSD4	99	77.778	ENSNLEG00000007465	RPUSD4	98	78.649	Nomascus_leucogenys
ENSOARG00000012238	RPUSD4	94	66.667	ENSMEUG00000004370	RPUSD4	96	66.667	Notamacropus_eugenii
ENSOARG00000012238	RPUSD4	68	61.089	ENSOPRG00000013141	-	97	61.089	Ochotona_princeps
ENSOARG00000012238	RPUSD4	96	80.220	ENSODEG00000004577	RPUSD4	96	80.220	Octodon_degus
ENSOARG00000012238	RPUSD4	88	50.737	ENSONIG00000018879	rpusd4	91	50.737	Oreochromis_niloticus
ENSOARG00000012238	RPUSD4	77	65.763	ENSOANG00000007247	RPUSD4	95	65.657	Ornithorhynchus_anatinus
ENSOARG00000012238	RPUSD4	97	79.133	ENSOCUG00000017039	RPUSD4	97	79.133	Oryctolagus_cuniculus
ENSOARG00000012238	RPUSD4	87	48.368	ENSORLG00000002750	rpusd4	88	49.688	Oryzias_latipes
ENSOARG00000012238	RPUSD4	87	48.246	ENSORLG00020002044	rpusd4	81	49.231	Oryzias_latipes_hni
ENSOARG00000012238	RPUSD4	87	48.538	ENSORLG00015020034	rpusd4	81	49.538	Oryzias_latipes_hsok
ENSOARG00000012238	RPUSD4	84	52.160	ENSOMEG00000004861	rpusd4	79	52.160	Oryzias_melastigma
ENSOARG00000012238	RPUSD4	98	79.412	ENSOGAG00000008922	RPUSD4	97	80.654	Otolemur_garnettii
ENSOARG00000012238	RPUSD4	99	77.513	ENSPPAG00000042883	RPUSD4	91	78.649	Pan_paniscus
ENSOARG00000012238	RPUSD4	97	80.270	ENSPPRG00000003081	RPUSD4	98	80.541	Panthera_pardus
ENSOARG00000012238	RPUSD4	97	80.270	ENSPTIG00000012059	RPUSD4	98	80.541	Panthera_tigris_altaica
ENSOARG00000012238	RPUSD4	97	78.378	ENSPTRG00000004454	RPUSD4	98	78.649	Pan_troglodytes
ENSOARG00000012238	RPUSD4	97	79.189	ENSPANG00000015040	RPUSD4	98	79.189	Papio_anubis
ENSOARG00000012238	RPUSD4	88	57.015	ENSPKIG00000023986	rpusd4	83	57.538	Paramormyrops_kingsleyae
ENSOARG00000012238	RPUSD4	79	65.333	ENSPSIG00000014268	RPUSD4	95	65.333	Pelodiscus_sinensis
ENSOARG00000012238	RPUSD4	88	47.674	ENSPMGG00000002806	rpusd4	91	48.788	Periophthalmus_magnuspinnatus
ENSOARG00000012238	RPUSD4	99	67.989	ENSPEMG00000000278	Rpusd4	97	68.378	Peromyscus_maniculatus_bairdii
ENSOARG00000012238	RPUSD4	79	45.619	ENSPMAG00000008183	rpusd4	96	45.015	Petromyzon_marinus
ENSOARG00000012238	RPUSD4	92	70.370	ENSPCIG00000010212	RPUSD4	96	70.085	Phascolarctos_cinereus
ENSOARG00000012238	RPUSD4	87	48.397	ENSPFOG00000019030	rpusd4	87	49.249	Poecilia_formosa
ENSOARG00000012238	RPUSD4	87	48.974	ENSPLAG00000016848	rpusd4	84	49.849	Poecilia_latipinna
ENSOARG00000012238	RPUSD4	83	49.371	ENSPMEG00000017534	rpusd4	81	49.371	Poecilia_mexicana
ENSOARG00000012238	RPUSD4	79	50.645	ENSPREG00000005689	rpusd4	77	51.667	Poecilia_reticulata
ENSOARG00000012238	RPUSD4	99	78.307	ENSPPYG00000004043	RPUSD4	98	79.459	Pongo_abelii
ENSOARG00000012238	RPUSD4	78	77.477	ENSPCAG00000000753	RPUSD4	79	77.273	Procavia_capensis
ENSOARG00000012238	RPUSD4	96	75.342	ENSPCOG00000020694	RPUSD4	97	75.275	Propithecus_coquereli
ENSOARG00000012238	RPUSD4	98	79.515	ENSPVAG00000000988	RPUSD4	97	79.675	Pteropus_vampyrus
ENSOARG00000012238	RPUSD4	84	51.385	ENSPNYG00000009652	rpusd4	83	51.385	Pundamilia_nyererei
ENSOARG00000012238	RPUSD4	88	51.190	ENSPNAG00000012264	rpusd4	85	52.160	Pygocentrus_nattereri
ENSOARG00000012238	RPUSD4	97	76.839	ENSRNOG00000011567	Rpusd4	96	77.198	Rattus_norvegicus
ENSOARG00000012238	RPUSD4	97	78.378	ENSRBIG00000034842	RPUSD4	98	78.378	Rhinopithecus_bieti
ENSOARG00000012238	RPUSD4	97	78.378	ENSRROG00000039753	RPUSD4	98	78.378	Rhinopithecus_roxellana
ENSOARG00000012238	RPUSD4	96	78.297	ENSSBOG00000030413	RPUSD4	97	78.297	Saimiri_boliviensis_boliviensis
ENSOARG00000012238	RPUSD4	79	72.093	ENSSHAG00000008304	RPUSD4	99	72.093	Sarcophilus_harrisii
ENSOARG00000012238	RPUSD4	85	57.704	ENSSFOG00015006203	rpusd4	89	58.507	Scleropages_formosus
ENSOARG00000012238	RPUSD4	87	51.045	ENSSMAG00000020978	rpusd4	85	51.553	Scophthalmus_maximus
ENSOARG00000012238	RPUSD4	87	48.955	ENSSDUG00000013399	rpusd4	84	49.843	Seriola_dumerili
ENSOARG00000012238	RPUSD4	87	49.258	ENSSLDG00000023507	rpusd4	85	50.000	Seriola_lalandi_dorsalis
ENSOARG00000012238	RPUSD4	88	62.426	ENSSPUG00000001401	RPUSD4	91	63.110	Sphenodon_punctatus
ENSOARG00000012238	RPUSD4	93	48.684	ENSSPAG00000012163	rpusd4	84	52.711	Stegastes_partitus
ENSOARG00000012238	RPUSD4	98	85.676	ENSSSCG00000015233	RPUSD4	98	85.637	Sus_scrofa
ENSOARG00000012238	RPUSD4	78	58.863	ENSTGUG00000000773	RPUSD4	99	58.863	Taeniopygia_guttata
ENSOARG00000012238	RPUSD4	85	50.305	ENSTRUG00000012283	rpusd4	84	50.305	Takifugu_rubripes
ENSOARG00000012238	RPUSD4	83	51.543	ENSTNIG00000014676	rpusd4	83	51.543	Tetraodon_nigroviridis
ENSOARG00000012238	RPUSD4	99	84.615	ENSTTRG00000001555	RPUSD4	98	85.637	Tursiops_truncatus
ENSOARG00000012238	RPUSD4	99	80.159	ENSUMAG00000002219	RPUSD4	98	81.081	Ursus_maritimus
ENSOARG00000012238	RPUSD4	70	85.660	ENSVPAG00000001066	RPUSD4	97	86.770	Vicugna_pacos
ENSOARG00000012238	RPUSD4	100	78.215	ENSVVUG00000020101	RPUSD4	98	79.245	Vulpes_vulpes
ENSOARG00000012238	RPUSD4	92	46.944	ENSXCOG00000004676	rpusd4	83	49.371	Xiphophorus_couchianus
ENSOARG00000012238	RPUSD4	92	47.368	ENSXMAG00000023351	rpusd4	81	50.157	Xiphophorus_maculatus