EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000012711 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 98837 bases
Position: chr6:59351088-59449924
Accession: 101115877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000013617	RRM_1	PF00076.22	2.4e-24	1	2
ENSOARP00000013617	RRM_1	PF00076.22	2.4e-24	2	2
ENSOARP00000013616	RRM_1	PF00076.22	2.5e-24	1	2
ENSOARP00000013616	RRM_1	PF00076.22	2.5e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000013819	RBM47-202	3026	-	ENSOARP00000013617	542 (aa)	-	W5PT36
ENSOART00000013818	RBM47-201	3044	XM_004009784	ENSOARP00000013616	548 (aa)	-	W5PT35

Gene Model

Click here to download ENSOARG00000012711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000012711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000012711	RBM47	53	57.658	ENSOARG00000016406	RBM46	65	59.937
ENSOARG00000012711	RBM47	71	50.766	ENSOARG00000013695	A1CF	75	50.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000012711	RBM47	100	89.112	ENSG00000163694	RBM47	100	98.305	Homo_sapiens
ENSOARG00000012711	RBM47	100	70.184	ENSAPOG00000011062	rbm47	100	69.514	Acanthochromis_polyacanthus
ENSOARG00000012711	RBM47	100	89.412	ENSAMEG00000009672	RBM47	100	89.412	Ailuropoda_melanoleuca
ENSOARG00000012711	RBM47	100	69.631	ENSACIG00000011531	rbm47	100	68.960	Amphilophus_citrinellus
ENSOARG00000012711	RBM47	100	70.924	ENSAOCG00000022245	rbm47	100	69.748	Amphiprion_ocellaris
ENSOARG00000012711	RBM47	100	70.924	ENSAPEG00000018304	rbm47	100	69.748	Amphiprion_percula
ENSOARG00000012711	RBM47	100	70.000	ENSATEG00000018400	rbm47	100	68.085	Anabas_testudineus
ENSOARG00000012711	RBM47	100	81.494	ENSAPLG00000013974	RBM47	100	81.324	Anas_platyrhynchos
ENSOARG00000012711	RBM47	100	78.607	ENSACAG00000011833	RBM47	100	78.167	Anolis_carolinensis
ENSOARG00000012711	RBM47	100	88.777	ENSANAG00000029440	RBM47	100	93.421	Aotus_nancymaae
ENSOARG00000012711	RBM47	100	68.740	ENSACLG00000016902	rbm47	100	70.103	Astatotilapia_calliptera
ENSOARG00000012711	RBM47	100	68.257	ENSAMXG00000021794	rbm47	100	67.763	Astyanax_mexicanus
ENSOARG00000012711	RBM47	100	90.863	ENSBTAG00000002356	RBM47	100	90.863	Bos_taurus
ENSOARG00000012711	RBM47	100	88.275	ENSCJAG00000019385	RBM47	100	93.421	Callithrix_jacchus
ENSOARG00000012711	RBM47	96	86.819	ENSCAFG00000015898	RBM47	100	85.160	Canis_familiaris
ENSOARG00000012711	RBM47	86	86.990	ENSCAFG00020010558	RBM47	94	94.118	Canis_lupus_dingo
ENSOARG00000012711	RBM47	100	91.032	ENSCHIG00000026214	RBM47	100	91.032	Capra_hircus
ENSOARG00000012711	RBM47	83	77.925	ENSTSYG00000033612	RBM47	92	89.720	Carlito_syrichta
ENSOARG00000012711	RBM47	100	80.270	ENSCAPG00000008426	RBM47	100	79.595	Cavia_aperea
ENSOARG00000012711	RBM47	100	88.196	ENSCPOG00000014100	RBM47	100	88.196	Cavia_porcellus
ENSOARG00000012711	RBM47	100	88.275	ENSCCAG00000030129	-	100	93.421	Cebus_capucinus
ENSOARG00000012711	RBM47	99	68.873	ENSCCAG00000024397	-	99	67.690	Cebus_capucinus
ENSOARG00000012711	RBM47	100	89.112	ENSCATG00000042064	RBM47	100	93.421	Cercocebus_atys
ENSOARG00000012711	RBM47	100	86.993	ENSCLAG00000001684	RBM47	100	87.162	Chinchilla_lanigera
ENSOARG00000012711	RBM47	100	89.112	ENSCSAG00000017060	RBM47	100	89.112	Chlorocebus_sabaeus
ENSOARG00000012711	RBM47	87	87.342	ENSCHOG00000011731	RBM47	88	86.076	Choloepus_hoffmanni
ENSOARG00000012711	RBM47	100	83.054	ENSCPBG00000013831	RBM47	100	82.550	Chrysemys_picta_bellii
ENSOARG00000012711	RBM47	100	88.610	ENSCANG00000019997	RBM47	100	93.421	Colobus_angolensis_palliatus
ENSOARG00000012711	RBM47	100	58.557	ENSCGRG00001020102	-	100	65.582	Cricetulus_griseus_chok1gshd
ENSOARG00000012711	RBM47	100	85.690	ENSCGRG00001000623	-	100	85.354	Cricetulus_griseus_chok1gshd
ENSOARG00000012711	RBM47	100	58.221	ENSCGRG00000014760	-	100	65.240	Cricetulus_griseus_crigri
ENSOARG00000012711	RBM47	100	84.848	ENSCGRG00000007762	-	100	84.512	Cricetulus_griseus_crigri
ENSOARG00000012711	RBM47	100	67.726	ENSCSEG00000004545	rbm47	100	66.107	Cynoglossus_semilaevis
ENSOARG00000012711	RBM47	100	68.571	ENSCVAG00000020144	rbm47	100	69.133	Cyprinodon_variegatus
ENSOARG00000012711	RBM47	100	69.802	ENSDARG00000061985	rbm47	100	68.812	Danio_rerio
ENSOARG00000012711	RBM47	100	87.119	ENSDNOG00000046854	RBM47	100	87.458	Dasypus_novemcinctus
ENSOARG00000012711	RBM47	100	86.767	ENSDORG00000010144	Rbm47	100	86.767	Dipodomys_ordii
ENSOARG00000012711	RBM47	100	85.403	ENSETEG00000009194	RBM47	100	86.600	Echinops_telfairi
ENSOARG00000012711	RBM47	99	51.400	ENSEBUG00000011912	rbm47	99	51.236	Eptatretus_burgeri
ENSOARG00000012711	RBM47	100	90.017	ENSEASG00005008443	RBM47	100	90.017	Equus_asinus_asinus
ENSOARG00000012711	RBM47	100	90.017	ENSECAG00000004400	RBM47	100	90.017	Equus_caballus
ENSOARG00000012711	RBM47	73	92.488	ENSEEUG00000001194	RBM47	75	92.019	Erinaceus_europaeus
ENSOARG00000012711	RBM47	100	66.504	ENSELUG00000006148	rbm47	97	70.449	Esox_lucius
ENSOARG00000012711	RBM47	100	89.679	ENSFCAG00000012399	RBM47	100	89.679	Felis_catus
ENSOARG00000012711	RBM47	100	83.139	ENSFALG00000002861	RBM47	100	83.025	Ficedula_albicollis
ENSOARG00000012711	RBM47	100	85.811	ENSFDAG00000016326	RBM47	100	84.459	Fukomys_damarensis
ENSOARG00000012711	RBM47	100	69.631	ENSFHEG00000007938	rbm47	100	67.617	Fundulus_heteroclitus
ENSOARG00000012711	RBM47	100	66.992	ENSGMOG00000014802	rbm47	100	66.016	Gadus_morhua
ENSOARG00000012711	RBM47	61	80.585	ENSGALG00000014267	RBM47	99	80.585	Gallus_gallus
ENSOARG00000012711	RBM47	61	71.809	ENSGAFG00000020571	rbm47	98	70.479	Gambusia_affinis
ENSOARG00000012711	RBM47	100	66.503	ENSGACG00000016223	rbm47	100	67.602	Gasterosteus_aculeatus
ENSOARG00000012711	RBM47	100	83.221	ENSGAGG00000020051	RBM47	100	82.718	Gopherus_agassizii
ENSOARG00000012711	RBM47	100	89.112	ENSGGOG00000001367	RBM47	100	93.421	Gorilla_gorilla
ENSOARG00000012711	RBM47	100	68.730	ENSHBUG00000003520	rbm47	100	70.103	Haplochromis_burtoni
ENSOARG00000012711	RBM47	83	89.344	ENSHGLG00000016914	RBM47	98	90.984	Heterocephalus_glaber_female
ENSOARG00000012711	RBM47	100	86.780	ENSHGLG00100014028	-	100	87.119	Heterocephalus_glaber_male
ENSOARG00000012711	RBM47	100	80.517	ENSHGLG00100003071	-	100	79.310	Heterocephalus_glaber_male
ENSOARG00000012711	RBM47	99	69.012	ENSHCOG00000002074	rbm47	99	67.347	Hippocampus_comes
ENSOARG00000012711	RBM47	100	70.084	ENSIPUG00000004743	rbm47	100	68.739	Ictalurus_punctatus
ENSOARG00000012711	RBM47	100	88.629	ENSSTOG00000004727	RBM47	100	88.629	Ictidomys_tridecemlineatus
ENSOARG00000012711	RBM47	100	86.935	ENSJJAG00000013823	Rbm47	100	87.270	Jaculus_jaculus
ENSOARG00000012711	RBM47	100	70.687	ENSKMAG00000000084	rbm47	100	69.347	Kryptolebias_marmoratus
ENSOARG00000012711	RBM47	100	69.231	ENSLBEG00000008436	rbm47	100	67.224	Labrus_bergylta
ENSOARG00000012711	RBM47	100	77.647	ENSLACG00000007196	RBM47	100	76.975	Latimeria_chalumnae
ENSOARG00000012711	RBM47	100	74.286	ENSLOCG00000012966	rbm47	95	72.605	Lepisosteus_oculatus
ENSOARG00000012711	RBM47	100	86.789	ENSLAFG00000011998	RBM47	100	85.378	Loxodonta_africana
ENSOARG00000012711	RBM47	100	89.112	ENSMFAG00000037967	RBM47	100	93.421	Macaca_fascicularis
ENSOARG00000012711	RBM47	100	89.112	ENSMMUG00000012036	RBM47	100	89.112	Macaca_mulatta
ENSOARG00000012711	RBM47	100	89.112	ENSMNEG00000040774	RBM47	100	93.421	Macaca_nemestrina
ENSOARG00000012711	RBM47	100	84.127	ENSMLEG00000041432	RBM47	96	90.000	Mandrillus_leucophaeus
ENSOARG00000012711	RBM47	100	69.294	ENSMAMG00000019143	rbm47	100	67.652	Mastacembelus_armatus
ENSOARG00000012711	RBM47	100	68.740	ENSMZEG00005023659	rbm47	100	68.085	Maylandia_zebra
ENSOARG00000012711	RBM47	100	82.558	ENSMGAG00000012226	RBM47	100	82.107	Meleagris_gallopavo
ENSOARG00000012711	RBM47	100	85.906	ENSMAUG00000006493	Rbm47	100	87.333	Mesocricetus_auratus
ENSOARG00000012711	RBM47	100	81.049	ENSMICG00000026417	RBM47	100	82.741	Microcebus_murinus
ENSOARG00000012711	RBM47	100	86.387	ENSMOCG00000021170	Rbm47	100	87.333	Microtus_ochrogaster
ENSOARG00000012711	RBM47	100	69.508	ENSMMOG00000007260	rbm47	100	67.213	Mola_mola
ENSOARG00000012711	RBM47	100	74.281	ENSMODG00000020561	-	100	74.112	Monodelphis_domestica
ENSOARG00000012711	RBM47	100	83.250	ENSMODG00000007003	RBM47	100	82.462	Monodelphis_domestica
ENSOARG00000012711	RBM47	100	69.463	ENSMALG00000005167	rbm47	100	68.792	Monopterus_albus
ENSOARG00000012711	RBM47	100	85.787	MGP_CAROLIEiJ_G0027258	Rbm47	100	87.333	Mus_caroli
ENSOARG00000012711	RBM47	100	86.125	ENSMUSG00000070780	Rbm47	100	88.000	Mus_musculus
ENSOARG00000012711	RBM47	100	86.125	MGP_PahariEiJ_G0017040	Rbm47	100	88.000	Mus_pahari
ENSOARG00000012711	RBM47	100	86.078	MGP_SPRETEiJ_G0028253	Rbm47	100	86.667	Mus_spretus
ENSOARG00000012711	RBM47	100	89.916	ENSMPUG00000006177	RBM47	94	89.916	Mustela_putorius_furo
ENSOARG00000012711	RBM47	100	85.956	ENSMLUG00000000889	RBM47	100	85.956	Myotis_lucifugus
ENSOARG00000012711	RBM47	100	87.227	ENSNGAG00000003325	Rbm47	100	86.891	Nannospalax_galili
ENSOARG00000012711	RBM47	100	69.055	ENSNBRG00000015092	rbm47	100	68.137	Neolamprologus_brichardi
ENSOARG00000012711	RBM47	100	87.437	ENSNLEG00000017151	RBM47	100	92.105	Nomascus_leucogenys
ENSOARG00000012711	RBM47	71	76.636	ENSMEUG00000009516	-	99	75.701	Notamacropus_eugenii
ENSOARG00000012711	RBM47	80	94.915	ENSOPRG00000016507	-	74	93.007	Ochotona_princeps
ENSOARG00000012711	RBM47	100	88.176	ENSODEG00000004873	RBM47	100	88.176	Octodon_degus
ENSOARG00000012711	RBM47	100	68.903	ENSONIG00000009061	rbm47	100	67.594	Oreochromis_niloticus
ENSOARG00000012711	RBM47	100	79.732	ENSOANG00000008978	RBM47	100	80.067	Ornithorhynchus_anatinus
ENSOARG00000012711	RBM47	100	87.669	ENSOCUG00000012034	RBM47	100	87.331	Oryctolagus_cuniculus
ENSOARG00000012711	RBM47	100	69.631	ENSORLG00000005847	rbm47	100	68.624	Oryzias_latipes
ENSOARG00000012711	RBM47	100	69.799	ENSORLG00020005154	rbm47	100	68.792	Oryzias_latipes_hni
ENSOARG00000012711	RBM47	100	70.134	ENSORLG00015000066	rbm47	100	69.128	Oryzias_latipes_hsok
ENSOARG00000012711	RBM47	100	71.309	ENSOMEG00000010730	rbm47	100	69.799	Oryzias_melastigma
ENSOARG00000012711	RBM47	100	80.306	ENSOGAG00000025193	-	100	79.457	Otolemur_garnettii
ENSOARG00000012711	RBM47	100	89.412	ENSOGAG00000029367	-	100	89.412	Otolemur_garnettii
ENSOARG00000012711	RBM47	100	87.605	ENSPPAG00000029763	RBM47	100	86.464	Pan_paniscus
ENSOARG00000012711	RBM47	100	86.294	ENSPPRG00000012873	RBM47	100	89.552	Panthera_pardus
ENSOARG00000012711	RBM47	82	94.196	ENSPTIG00000017046	RBM47	89	94.196	Panthera_tigris_altaica
ENSOARG00000012711	RBM47	100	89.112	ENSPTRG00000016006	RBM47	100	93.421	Pan_troglodytes
ENSOARG00000012711	RBM47	100	89.112	ENSPANG00000005980	RBM47	100	93.421	Papio_anubis
ENSOARG00000012711	RBM47	96	70.506	ENSPKIG00000005037	rbm47	100	67.330	Paramormyrops_kingsleyae
ENSOARG00000012711	RBM47	96	68.348	ENSPKIG00000013431	RBM47	100	64.933	Paramormyrops_kingsleyae
ENSOARG00000012711	RBM47	89	83.144	ENSPSIG00000017516	RBM47	97	83.144	Pelodiscus_sinensis
ENSOARG00000012711	RBM47	100	67.953	ENSPMGG00000018540	rbm47	100	67.450	Periophthalmus_magnuspinnatus
ENSOARG00000012711	RBM47	100	86.891	ENSPEMG00000011088	Rbm47	100	88.000	Peromyscus_maniculatus_bairdii
ENSOARG00000012711	RBM47	96	72.117	ENSPFOG00000007997	rbm47	100	67.642	Poecilia_formosa
ENSOARG00000012711	RBM47	96	71.750	ENSPLAG00000002072	rbm47	100	70.479	Poecilia_latipinna
ENSOARG00000012711	RBM47	100	71.096	ENSPMEG00000017492	rbm47	100	69.115	Poecilia_mexicana
ENSOARG00000012711	RBM47	96	72.097	ENSPREG00000008456	rbm47	100	70.745	Poecilia_reticulata
ENSOARG00000012711	RBM47	98	75.379	ENSPPYG00000014688	RBM47	100	74.030	Pongo_abelii
ENSOARG00000012711	RBM47	80	87.500	ENSPCAG00000011879	RBM47	81	85.536	Procavia_capensis
ENSOARG00000012711	RBM47	100	84.720	ENSPCOG00000023451	RBM47	100	86.667	Propithecus_coquereli
ENSOARG00000012711	RBM47	100	86.288	ENSPVAG00000003812	RBM47	100	86.869	Pteropus_vampyrus
ENSOARG00000012711	RBM47	100	68.893	ENSPNYG00000022868	rbm47	100	68.241	Pundamilia_nyererei
ENSOARG00000012711	RBM47	100	68.801	ENSPNAG00000007940	rbm47	100	67.816	Pygocentrus_nattereri
ENSOARG00000012711	RBM47	100	86.294	ENSRNOG00000002408	Rbm47	100	86.464	Rattus_norvegicus
ENSOARG00000012711	RBM47	100	88.610	ENSRBIG00000039601	RBM47	100	93.421	Rhinopithecus_bieti
ENSOARG00000012711	RBM47	100	88.610	ENSRROG00000044696	RBM47	100	93.421	Rhinopithecus_roxellana
ENSOARG00000012711	RBM47	100	84.433	ENSSBOG00000028475	RBM47	100	87.629	Saimiri_boliviensis_boliviensis
ENSOARG00000012711	RBM47	100	84.264	ENSSHAG00000017576	RBM47	100	84.095	Sarcophilus_harrisii
ENSOARG00000012711	RBM47	100	67.672	ENSSFOG00015024101	RBM47	100	66.164	Scleropages_formosus
ENSOARG00000012711	RBM47	100	67.500	ENSSFOG00015012445	rbm47	100	66.110	Scleropages_formosus
ENSOARG00000012711	RBM47	100	68.197	ENSSMAG00000009744	rbm47	100	68.205	Scophthalmus_maximus
ENSOARG00000012711	RBM47	100	70.973	ENSSDUG00000022684	rbm47	100	69.347	Seriola_dumerili
ENSOARG00000012711	RBM47	100	71.309	ENSSLDG00000003109	rbm47	100	69.682	Seriola_lalandi_dorsalis
ENSOARG00000012711	RBM47	83	85.455	ENSSARG00000001735	RBM47	84	85.938	Sorex_araneus
ENSOARG00000012711	RBM47	100	80.168	ENSSPUG00000007515	RBM47	100	78.824	Sphenodon_punctatus
ENSOARG00000012711	RBM47	100	71.309	ENSSPAG00000001257	rbm47	100	69.682	Stegastes_partitus
ENSOARG00000012711	RBM47	100	90.186	ENSSSCG00000008796	RBM47	100	90.186	Sus_scrofa
ENSOARG00000012711	RBM47	100	82.492	ENSTGUG00000008705	RBM47	100	82.323	Taeniopygia_guttata
ENSOARG00000012711	RBM47	98	69.165	ENSTRUG00000014050	rbm47	100	66.780	Takifugu_rubripes
ENSOARG00000012711	RBM47	100	68.197	ENSTNIG00000006127	rbm47	100	66.667	Tetraodon_nigroviridis
ENSOARG00000012711	RBM47	75	93.421	ENSTBEG00000001607	RBM47	76	92.105	Tupaia_belangeri
ENSOARG00000012711	RBM47	100	89.983	ENSTTRG00000002839	RBM47	100	89.983	Tursiops_truncatus
ENSOARG00000012711	RBM47	100	89.899	ENSUAMG00000021346	RBM47	100	89.899	Ursus_americanus
ENSOARG00000012711	RBM47	96	87.148	ENSVVUG00000014774	RBM47	100	86.824	Vulpes_vulpes
ENSOARG00000012711	RBM47	100	79.322	ENSXETG00000012802	rbm47	100	79.322	Xenopus_tropicalis
ENSOARG00000012711	RBM47	87	71.543	ENSXCOG00000000780	rbm47	100	70.213	Xiphophorus_couchianus
ENSOARG00000012711	RBM47	100	69.799	ENSXMAG00000009874	rbm47	100	68.367	Xiphophorus_maculatus