EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000012875 (Gene tree)
Gene ID: 101107310
Gene Symbol: BLM
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 65537 bases
Position: chr18:20942196-21007732
Accession: 101107310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000013800	HRDC	PF00570.23	1.1e-12	1	1
ENSOARP00000013800	BDHCT	PF08072.11	1.8e-20	1	1
ENSOARP00000013800	DEAD	PF00270.29	4.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000014005	BLM-201	5819	XM_004017761	ENSOARP00000013800	1429 (aa)	XP_004017810	W5PTL9

Gene Model

Click here to download ENSOARG00000012875's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03440	Homologous recombination	KEGG
oas03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000012875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000012875	BLM	100	80.796	ENSG00000197299	BLM	100	80.656	Homo_sapiens
ENSOARG00000012875	BLM	79	51.787	ENSAPOG00000017966	blm	99	45.890	Acanthochromis_polyacanthus
ENSOARG00000012875	BLM	100	81.678	ENSAMEG00000013843	BLM	100	81.608	Ailuropoda_melanoleuca
ENSOARG00000012875	BLM	63	65.350	ENSACIG00000023762	blm	64	64.602	Amphilophus_citrinellus
ENSOARG00000012875	BLM	55	64.676	ENSAOCG00000003318	blm	57	64.885	Amphiprion_ocellaris
ENSOARG00000012875	BLM	55	64.676	ENSAPEG00000018105	blm	56	64.885	Amphiprion_percula
ENSOARG00000012875	BLM	83	66.244	ENSATEG00000006421	blm	85	66.540	Anabas_testudineus
ENSOARG00000012875	BLM	81	57.641	ENSAPLG00000006878	BLM	98	57.226	Anas_platyrhynchos
ENSOARG00000012875	BLM	100	80.098	ENSANAG00000038415	BLM	100	80.168	Aotus_nancymaae
ENSOARG00000012875	BLM	87	62.278	ENSACLG00000020354	blm	62	62.515	Astatotilapia_calliptera
ENSOARG00000012875	BLM	91	47.829	ENSAMXG00000016970	blm	90	62.500	Astyanax_mexicanus
ENSOARG00000012875	BLM	93	94.824	ENSBTAG00000020301	BLM	100	95.010	Bos_taurus
ENSOARG00000012875	BLM	100	79.693	ENSCJAG00000009803	BLM	100	79.763	Callithrix_jacchus
ENSOARG00000012875	BLM	100	82.530	ENSCAFG00000012385	BLM	100	82.600	Canis_familiaris
ENSOARG00000012875	BLM	100	82.530	ENSCAFG00020016111	BLM	93	93.690	Canis_lupus_dingo
ENSOARG00000012875	BLM	100	97.971	ENSCHIG00000010329	BLM	100	97.971	Capra_hircus
ENSOARG00000012875	BLM	100	79.553	ENSTSYG00000012368	BLM	100	79.623	Carlito_syrichta
ENSOARG00000012875	BLM	87	84.127	ENSCAPG00000017976	BLM	100	84.271	Cavia_aperea
ENSOARG00000012875	BLM	100	75.087	ENSCPOG00000001761	BLM	100	75.157	Cavia_porcellus
ENSOARG00000012875	BLM	100	79.496	ENSCCAG00000023069	BLM	100	79.566	Cebus_capucinus
ENSOARG00000012875	BLM	100	80.447	ENSCATG00000040609	BLM	92	92.722	Cercocebus_atys
ENSOARG00000012875	BLM	100	75.872	ENSCLAG00000012111	BLM	100	75.872	Chinchilla_lanigera
ENSOARG00000012875	BLM	100	80.278	ENSCSAG00000017040	BLM	100	80.347	Chlorocebus_sabaeus
ENSOARG00000012875	BLM	91	76.842	ENSCHOG00000006255	BLM	93	76.842	Choloepus_hoffmanni
ENSOARG00000012875	BLM	89	55.436	ENSCPBG00000025000	BLM	96	72.627	Chrysemys_picta_bellii
ENSOARG00000012875	BLM	88	71.067	ENSCANG00000034808	BLM	100	71.067	Colobus_angolensis_palliatus
ENSOARG00000012875	BLM	100	75.662	ENSCGRG00001024897	Blm	100	76.081	Cricetulus_griseus_chok1gshd
ENSOARG00000012875	BLM	68	70.649	ENSCGRG00000016261	Blm	96	71.606	Cricetulus_griseus_crigri
ENSOARG00000012875	BLM	58	62.810	ENSCSEG00000013483	blm	64	62.603	Cynoglossus_semilaevis
ENSOARG00000012875	BLM	99	79.721	ENSDNOG00000010159	BLM	99	79.791	Dasypus_novemcinctus
ENSOARG00000012875	BLM	74	79.131	ENSDORG00000011033	Blm	100	79.226	Dipodomys_ordii
ENSOARG00000012875	BLM	82	87.500	ENSETEG00000015019	BLM	82	87.500	Echinops_telfairi
ENSOARG00000012875	BLM	100	80.909	ENSEASG00005006727	BLM	100	81.049	Equus_asinus_asinus
ENSOARG00000012875	BLM	100	83.566	ENSECAG00000011405	BLM	100	83.636	Equus_caballus
ENSOARG00000012875	BLM	98	74.517	ENSEEUG00000001434	BLM	99	73.007	Erinaceus_europaeus
ENSOARG00000012875	BLM	84	66.119	ENSELUG00000019098	blm	61	68.904	Esox_lucius
ENSOARG00000012875	BLM	100	81.355	ENSFCAG00000006087	BLM	100	83.832	Felis_catus
ENSOARG00000012875	BLM	80	55.584	ENSFALG00000010981	BLM	89	55.268	Ficedula_albicollis
ENSOARG00000012875	BLM	100	68.194	ENSFDAG00000012658	BLM	100	71.627	Fukomys_damarensis
ENSOARG00000012875	BLM	89	60.970	ENSFHEG00000002553	blm	88	62.397	Fundulus_heteroclitus
ENSOARG00000012875	BLM	88	62.500	ENSGMOG00000016431	blm	96	58.698	Gadus_morhua
ENSOARG00000012875	BLM	99	50.913	ENSGALG00000008256	BLM	99	50.678	Gallus_gallus
ENSOARG00000012875	BLM	68	64.668	ENSGACG00000010863	blm	100	73.535	Gasterosteus_aculeatus
ENSOARG00000012875	BLM	88	52.042	ENSGAGG00000005383	BLM	92	75.637	Gopherus_agassizii
ENSOARG00000012875	BLM	100	80.517	ENSGGOG00000007710	BLM	92	93.531	Gorilla_gorilla
ENSOARG00000012875	BLM	59	62.515	ENSHBUG00000015943	blm	60	62.604	Haplochromis_burtoni
ENSOARG00000012875	BLM	100	76.902	ENSHGLG00000013231	BLM	99	76.832	Heterocephalus_glaber_female
ENSOARG00000012875	BLM	60	61.309	ENSHCOG00000011455	blm	83	61.747	Hippocampus_comes
ENSOARG00000012875	BLM	60	61.290	ENSIPUG00000000529	blm	68	64.403	Ictalurus_punctatus
ENSOARG00000012875	BLM	100	77.716	ENSSTOG00000005000	BLM	100	78.064	Ictidomys_tridecemlineatus
ENSOARG00000012875	BLM	66	82.636	ENSJJAG00000016322	Blm	94	82.636	Jaculus_jaculus
ENSOARG00000012875	BLM	58	62.994	ENSKMAG00000016608	blm	59	63.114	Kryptolebias_marmoratus
ENSOARG00000012875	BLM	59	66.589	ENSLACG00000006490	BLM	99	50.937	Latimeria_chalumnae
ENSOARG00000012875	BLM	79	52.926	ENSLOCG00000014302	blm	99	47.110	Lepisosteus_oculatus
ENSOARG00000012875	BLM	100	80.587	ENSMFAG00000042982	BLM	92	93.261	Macaca_fascicularis
ENSOARG00000012875	BLM	100	80.656	ENSMMUG00000019526	BLM	92	93.261	Macaca_mulatta
ENSOARG00000012875	BLM	98	77.841	ENSMNEG00000031251	BLM	92	92.992	Macaca_nemestrina
ENSOARG00000012875	BLM	100	77.933	ENSMLEG00000032934	BLM	100	77.723	Mandrillus_leucophaeus
ENSOARG00000012875	BLM	67	63.455	ENSMAMG00000008726	blm	68	63.807	Mastacembelus_armatus
ENSOARG00000012875	BLM	88	62.367	ENSMZEG00005022323	blm	71	62.545	Maylandia_zebra
ENSOARG00000012875	BLM	100	75.070	ENSMAUG00000008953	Blm	99	75.487	Mesocricetus_auratus
ENSOARG00000012875	BLM	100	80.461	ENSMICG00000034442	BLM	100	80.949	Microcebus_murinus
ENSOARG00000012875	BLM	100	75.523	ENSMOCG00000016367	Blm	99	75.453	Microtus_ochrogaster
ENSOARG00000012875	BLM	59	62.207	ENSMMOG00000006959	blm	60	62.207	Mola_mola
ENSOARG00000012875	BLM	99	64.529	ENSMODG00000019449	BLM	99	63.823	Monodelphis_domestica
ENSOARG00000012875	BLM	70	63.636	ENSMALG00000007323	blm	71	63.636	Monopterus_albus
ENSOARG00000012875	BLM	100	73.904	MGP_CAROLIEiJ_G0029907	Blm	100	73.556	Mus_caroli
ENSOARG00000012875	BLM	100	74.030	ENSMUSG00000030528	Blm	100	73.615	Mus_musculus
ENSOARG00000012875	BLM	100	74.461	MGP_PahariEiJ_G0013129	Blm	100	74.043	Mus_pahari
ENSOARG00000012875	BLM	100	73.889	MGP_SPRETEiJ_G0031009	Blm	100	73.889	Mus_spretus
ENSOARG00000012875	BLM	84	80.830	ENSMPUG00000015657	BLM	99	80.747	Mustela_putorius_furo
ENSOARG00000012875	BLM	100	79.666	ENSMLUG00000014697	BLM	100	79.138	Myotis_lucifugus
ENSOARG00000012875	BLM	100	76.832	ENSNGAG00000001275	Blm	100	75.470	Nannospalax_galili
ENSOARG00000012875	BLM	87	62.515	ENSNBRG00000019702	blm	71	62.768	Neolamprologus_brichardi
ENSOARG00000012875	BLM	100	79.399	ENSNLEG00000012087	BLM	100	80.813	Nomascus_leucogenys
ENSOARG00000012875	BLM	99	60.665	ENSMEUG00000007253	BLM	99	60.803	Notamacropus_eugenii
ENSOARG00000012875	BLM	95	86.030	ENSOPRG00000011667	BLM	95	85.892	Ochotona_princeps
ENSOARG00000012875	BLM	74	76.443	ENSODEG00000015373	BLM	100	75.781	Octodon_degus
ENSOARG00000012875	BLM	87	62.500	ENSONIG00000015193	blm	89	62.529	Oreochromis_niloticus
ENSOARG00000012875	BLM	53	82.682	ENSOANG00000009316	-	99	82.445	Ornithorhynchus_anatinus
ENSOARG00000012875	BLM	99	73.813	ENSOCUG00000013969	BLM	99	73.813	Oryctolagus_cuniculus
ENSOARG00000012875	BLM	87	63.863	ENSORLG00000008110	blm	87	63.744	Oryzias_latipes
ENSOARG00000012875	BLM	87	64.014	ENSORLG00020004812	blm	87	64.176	Oryzias_latipes_hni
ENSOARG00000012875	BLM	87	64.252	ENSORLG00015018640	blm	87	64.294	Oryzias_latipes_hsok
ENSOARG00000012875	BLM	100	75.244	ENSOGAG00000005708	BLM	100	75.314	Otolemur_garnettii
ENSOARG00000012875	BLM	100	80.796	ENSPPAG00000032173	BLM	100	81.006	Pan_paniscus
ENSOARG00000012875	BLM	100	81.704	ENSPPRG00000002471	BLM	100	84.431	Panthera_pardus
ENSOARG00000012875	BLM	100	81.425	ENSPTIG00000016168	BLM	100	81.494	Panthera_tigris_altaica
ENSOARG00000012875	BLM	100	80.447	ENSPTRG00000007460	BLM	100	80.656	Pan_troglodytes
ENSOARG00000012875	BLM	100	80.656	ENSPANG00000018572	BLM	92	92.992	Papio_anubis
ENSOARG00000012875	BLM	88	62.824	ENSPKIG00000008954	blm	67	63.059	Paramormyrops_kingsleyae
ENSOARG00000012875	BLM	50	67.403	ENSPMGG00000006629	blm	80	66.898	Periophthalmus_magnuspinnatus
ENSOARG00000012875	BLM	100	75.627	ENSPEMG00000017348	Blm	100	75.418	Peromyscus_maniculatus_bairdii
ENSOARG00000012875	BLM	50	58.964	ENSPMAG00000000445	blm	96	59.244	Petromyzon_marinus
ENSOARG00000012875	BLM	99	63.896	ENSPCIG00000006609	BLM	99	63.872	Phascolarctos_cinereus
ENSOARG00000012875	BLM	57	64.917	ENSPFOG00000005059	blm	64	64.917	Poecilia_formosa
ENSOARG00000012875	BLM	63	64.917	ENSPMEG00000000321	blm	64	64.917	Poecilia_mexicana
ENSOARG00000012875	BLM	100	79.065	ENSPPYG00000006784	BLM	100	79.135	Pongo_abelii
ENSOARG00000012875	BLM	72	90.909	ENSPCAG00000008960	BLM	73	90.909	Procavia_capensis
ENSOARG00000012875	BLM	100	75.994	ENSPCOG00000000439	BLM	100	75.925	Propithecus_coquereli
ENSOARG00000012875	BLM	82	95.652	ENSPVAG00000011642	BLM	88	95.484	Pteropus_vampyrus
ENSOARG00000012875	BLM	59	51.540	ENSPNYG00000010956	blm	57	51.425	Pundamilia_nyererei
ENSOARG00000012875	BLM	58	64.817	ENSPNAG00000011714	blm	67	64.411	Pygocentrus_nattereri
ENSOARG00000012875	BLM	100	73.013	ENSRNOG00000011213	Blm	100	73.082	Rattus_norvegicus
ENSOARG00000012875	BLM	100	78.282	ENSRBIG00000029656	BLM	92	91.914	Rhinopithecus_bieti
ENSOARG00000012875	BLM	100	79.749	ENSRROG00000037871	BLM	92	91.914	Rhinopithecus_roxellana
ENSOARG00000012875	BLM	94	79.192	ENSSBOG00000030957	BLM	100	79.280	Saimiri_boliviensis_boliviensis
ENSOARG00000012875	BLM	99	63.208	ENSSHAG00000007988	BLM	99	63.140	Sarcophilus_harrisii
ENSOARG00000012875	BLM	58	62.500	ENSSFOG00015015462	blm	66	62.291	Scleropages_formosus
ENSOARG00000012875	BLM	59	61.647	ENSSMAG00000001120	blm	99	46.227	Scophthalmus_maximus
ENSOARG00000012875	BLM	60	61.512	ENSSDUG00000010955	blm	99	46.304	Seriola_dumerili
ENSOARG00000012875	BLM	88	62.500	ENSSLDG00000000634	blm	87	62.810	Seriola_lalandi_dorsalis
ENSOARG00000012875	BLM	91	74.234	ENSSARG00000006398	BLM	96	74.324	Sorex_araneus
ENSOARG00000012875	BLM	80	54.830	ENSSPUG00000000013	BLM	96	54.799	Sphenodon_punctatus
ENSOARG00000012875	BLM	68	61.747	ENSSPAG00000013999	blm	88	61.747	Stegastes_partitus
ENSOARG00000012875	BLM	100	84.846	ENSSSCG00000001816	BLM	99	84.934	Sus_scrofa
ENSOARG00000012875	BLM	80	51.240	ENSTGUG00000009959	-	99	50.984	Taeniopygia_guttata
ENSOARG00000012875	BLM	79	50.384	ENSTRUG00000019860	blm	99	45.302	Takifugu_rubripes
ENSOARG00000012875	BLM	74	65.096	ENSTNIG00000019246	blm	61	65.223	Tetraodon_nigroviridis
ENSOARG00000012875	BLM	79	82.987	ENSTBEG00000006706	BLM	81	82.987	Tupaia_belangeri
ENSOARG00000012875	BLM	100	85.954	ENSTTRG00000016386	BLM	100	85.954	Tursiops_truncatus
ENSOARG00000012875	BLM	100	82.028	ENSUMAG00000009105	BLM	99	93.160	Ursus_maritimus
ENSOARG00000012875	BLM	99	81.119	ENSVPAG00000000085	BLM	99	81.608	Vicugna_pacos
ENSOARG00000012875	BLM	96	91.484	ENSVVUG00000006402	BLM	100	91.484	Vulpes_vulpes
ENSOARG00000012875	BLM	99	51.084	ENSXETG00000007847	blm	54	72.925	Xenopus_tropicalis
ENSOARG00000012875	BLM	55	60.486	ENSXCOG00000020227	blm	55	60.997	Xiphophorus_couchianus
ENSOARG00000012875	BLM	55	64.066	ENSXMAG00000002951	blm	56	63.939	Xiphophorus_maculatus