EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000012889 (Gene tree)
Gene ID: 101113701
Gene Symbol: CPSF2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 22520 bases
Position: chr18:55757126-55779645
Accession: 101113701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000013807	Beta-Casp	PF10996.8	2e-16	1	1
ENSOARP00000013807	Lactamase_B	PF00753.27	5.7e-07	1	1
ENSOARP00000013807	RMMBL	PF07521.12	8.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000014012	CPSF2-201	2292	XM_004017954	ENSOARP00000013807	763 (aa)	XP_004018003	W5PTM6

Gene Model

Click here to download ENSOARG00000012889's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000012889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000012889	CPSF2	100	96.556	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSOARG00000012889	CPSF2	100	82.933	ENSAPOG00000001242	cpsf2	100	82.933	Acanthochromis_polyacanthus
ENSOARG00000012889	CPSF2	100	83.333	ENSACIG00000009331	cpsf2	100	83.333	Amphilophus_citrinellus
ENSOARG00000012889	CPSF2	100	83.059	ENSAOCG00000014095	cpsf2	100	83.059	Amphiprion_ocellaris
ENSOARG00000012889	CPSF2	100	83.059	ENSAPEG00000009158	cpsf2	100	83.059	Amphiprion_percula
ENSOARG00000012889	CPSF2	96	83.202	ENSATEG00000017644	cpsf2	100	80.801	Anabas_testudineus
ENSOARG00000012889	CPSF2	100	93.511	ENSAPLG00000006330	CPSF2	100	93.511	Anas_platyrhynchos
ENSOARG00000012889	CPSF2	100	92.357	ENSACAG00000009245	CPSF2	100	92.357	Anolis_carolinensis
ENSOARG00000012889	CPSF2	100	96.556	ENSANAG00000022915	CPSF2	100	96.556	Aotus_nancymaae
ENSOARG00000012889	CPSF2	100	82.763	ENSAMXG00000018696	cpsf2	100	82.763	Astyanax_mexicanus
ENSOARG00000012889	CPSF2	100	96.939	ENSBTAG00000010227	CPSF2	100	96.939	Bos_taurus
ENSOARG00000012889	CPSF2	100	39.369	WBGene00017313	cpsf-2	100	38.830	Caenorhabditis_elegans
ENSOARG00000012889	CPSF2	100	96.556	ENSCJAG00000018069	CPSF2	100	96.556	Callithrix_jacchus
ENSOARG00000012889	CPSF2	100	96.556	ENSCAFG00000010909	CPSF2	100	96.556	Canis_familiaris
ENSOARG00000012889	CPSF2	100	96.556	ENSCAFG00020020670	CPSF2	100	96.556	Canis_lupus_dingo
ENSOARG00000012889	CPSF2	100	96.939	ENSCHIG00000023848	CPSF2	100	96.939	Capra_hircus
ENSOARG00000012889	CPSF2	100	95.408	ENSTSYG00000009036	CPSF2	100	95.408	Carlito_syrichta
ENSOARG00000012889	CPSF2	100	96.684	ENSCPOG00000010899	CPSF2	100	96.684	Cavia_porcellus
ENSOARG00000012889	CPSF2	100	96.556	ENSCCAG00000028088	CPSF2	100	96.556	Cebus_capucinus
ENSOARG00000012889	CPSF2	100	96.684	ENSCATG00000030132	CPSF2	100	96.684	Cercocebus_atys
ENSOARG00000012889	CPSF2	100	96.556	ENSCLAG00000012404	CPSF2	100	96.556	Chinchilla_lanigera
ENSOARG00000012889	CPSF2	100	96.684	ENSCSAG00000011300	CPSF2	100	96.684	Chlorocebus_sabaeus
ENSOARG00000012889	CPSF2	100	89.923	ENSCHOG00000012904	CPSF2	100	89.923	Choloepus_hoffmanni
ENSOARG00000012889	CPSF2	100	93.503	ENSCPBG00000008766	CPSF2	97	93.503	Chrysemys_picta_bellii
ENSOARG00000012889	CPSF2	100	52.919	ENSCING00000007881	-	100	52.547	Ciona_intestinalis
ENSOARG00000012889	CPSF2	94	96.327	ENSCANG00000041651	CPSF2	100	96.458	Colobus_angolensis_palliatus
ENSOARG00000012889	CPSF2	100	95.663	ENSCGRG00001006901	Cpsf2	100	95.663	Cricetulus_griseus_chok1gshd
ENSOARG00000012889	CPSF2	100	95.663	ENSCGRG00000012416	Cpsf2	100	95.663	Cricetulus_griseus_crigri
ENSOARG00000012889	CPSF2	100	80.910	ENSCSEG00000004116	cpsf2	100	80.910	Cynoglossus_semilaevis
ENSOARG00000012889	CPSF2	100	82.301	ENSCVAG00000000095	cpsf2	100	82.427	Cyprinodon_variegatus
ENSOARG00000012889	CPSF2	100	82.702	ENSDARG00000028971	cpsf2	100	82.702	Danio_rerio
ENSOARG00000012889	CPSF2	100	96.429	ENSDNOG00000042757	CPSF2	100	96.429	Dasypus_novemcinctus
ENSOARG00000012889	CPSF2	100	96.301	ENSDORG00000013709	Cpsf2	100	96.301	Dipodomys_ordii
ENSOARG00000012889	CPSF2	100	51.925	FBgn0027873	Cpsf100	100	51.806	Drosophila_melanogaster
ENSOARG00000012889	CPSF2	100	87.852	ENSETEG00000012123	CPSF2	100	87.852	Echinops_telfairi
ENSOARG00000012889	CPSF2	51	71.078	ENSEBUG00000012098	cpsf2	93	71.078	Eptatretus_burgeri
ENSOARG00000012889	CPSF2	91	93.721	ENSEASG00005021193	CPSF2	100	93.721	Equus_asinus_asinus
ENSOARG00000012889	CPSF2	100	96.429	ENSECAG00000023935	CPSF2	100	96.429	Equus_caballus
ENSOARG00000012889	CPSF2	100	81.227	ENSELUG00000008442	cpsf2	100	81.227	Esox_lucius
ENSOARG00000012889	CPSF2	100	96.429	ENSFCAG00000007886	CPSF2	100	96.429	Felis_catus
ENSOARG00000012889	CPSF2	100	93.631	ENSFALG00000002412	CPSF2	100	93.631	Ficedula_albicollis
ENSOARG00000012889	CPSF2	100	96.556	ENSFDAG00000006327	CPSF2	100	96.556	Fukomys_damarensis
ENSOARG00000012889	CPSF2	96	81.486	ENSFHEG00000015465	cpsf2	98	81.747	Fundulus_heteroclitus
ENSOARG00000012889	CPSF2	100	80.730	ENSGMOG00000008761	cpsf2	100	80.730	Gadus_morhua
ENSOARG00000012889	CPSF2	100	92.866	ENSGALG00000010783	CPSF2	100	93.376	Gallus_gallus
ENSOARG00000012889	CPSF2	100	82.554	ENSGAFG00000001407	cpsf2	100	82.554	Gambusia_affinis
ENSOARG00000012889	CPSF2	100	81.669	ENSGACG00000008418	cpsf2	100	81.669	Gasterosteus_aculeatus
ENSOARG00000012889	CPSF2	100	93.631	ENSGAGG00000008287	CPSF2	100	93.631	Gopherus_agassizii
ENSOARG00000012889	CPSF2	100	96.556	ENSGGOG00000011799	CPSF2	100	96.556	Gorilla_gorilla
ENSOARG00000012889	CPSF2	100	82.301	ENSHBUG00000023466	cpsf2	100	82.301	Haplochromis_burtoni
ENSOARG00000012889	CPSF2	100	96.429	ENSHGLG00000018311	CPSF2	100	96.429	Heterocephalus_glaber_female
ENSOARG00000012889	CPSF2	100	96.429	ENSHGLG00100016460	CPSF2	100	96.429	Heterocephalus_glaber_male
ENSOARG00000012889	CPSF2	100	81.669	ENSHCOG00000019527	cpsf2	98	81.669	Hippocampus_comes
ENSOARG00000012889	CPSF2	100	82.763	ENSIPUG00000020857	cpsf2	100	82.763	Ictalurus_punctatus
ENSOARG00000012889	CPSF2	100	96.556	ENSSTOG00000009528	CPSF2	100	96.556	Ictidomys_tridecemlineatus
ENSOARG00000012889	CPSF2	100	96.429	ENSJJAG00000017925	Cpsf2	100	96.429	Jaculus_jaculus
ENSOARG00000012889	CPSF2	100	81.795	ENSKMAG00000019429	cpsf2	100	81.795	Kryptolebias_marmoratus
ENSOARG00000012889	CPSF2	95	81.041	ENSLBEG00000011585	cpsf2	100	81.200	Labrus_bergylta
ENSOARG00000012889	CPSF2	100	86.624	ENSLACG00000019024	CPSF2	100	87.134	Latimeria_chalumnae
ENSOARG00000012889	CPSF2	100	84.576	ENSLOCG00000014102	cpsf2	100	84.576	Lepisosteus_oculatus
ENSOARG00000012889	CPSF2	100	96.556	ENSLAFG00000004891	CPSF2	100	96.556	Loxodonta_africana
ENSOARG00000012889	CPSF2	100	96.684	ENSMFAG00000041212	CPSF2	100	96.684	Macaca_fascicularis
ENSOARG00000012889	CPSF2	100	96.684	ENSMMUG00000000699	CPSF2	100	96.684	Macaca_mulatta
ENSOARG00000012889	CPSF2	100	96.684	ENSMNEG00000031584	CPSF2	100	96.684	Macaca_nemestrina
ENSOARG00000012889	CPSF2	100	96.684	ENSMLEG00000029394	CPSF2	100	96.684	Mandrillus_leucophaeus
ENSOARG00000012889	CPSF2	100	82.933	ENSMAMG00000004235	cpsf2	100	82.933	Mastacembelus_armatus
ENSOARG00000012889	CPSF2	100	82.427	ENSMZEG00005001769	cpsf2	100	82.427	Maylandia_zebra
ENSOARG00000012889	CPSF2	100	92.994	ENSMGAG00000013122	CPSF2	100	93.503	Meleagris_gallopavo
ENSOARG00000012889	CPSF2	100	95.663	ENSMAUG00000015160	Cpsf2	100	95.663	Mesocricetus_auratus
ENSOARG00000012889	CPSF2	100	96.556	ENSMICG00000016441	CPSF2	100	96.556	Microcebus_murinus
ENSOARG00000012889	CPSF2	100	95.663	ENSMOCG00000015372	Cpsf2	100	95.663	Microtus_ochrogaster
ENSOARG00000012889	CPSF2	100	78.129	ENSMMOG00000015590	cpsf2	100	78.129	Mola_mola
ENSOARG00000012889	CPSF2	100	95.791	ENSMODG00000002042	CPSF2	100	95.791	Monodelphis_domestica
ENSOARG00000012889	CPSF2	100	79.772	ENSMALG00000022275	cpsf2	100	79.772	Monopterus_albus
ENSOARG00000012889	CPSF2	100	95.153	ENSMUSG00000041781	Cpsf2	100	95.153	Mus_musculus
ENSOARG00000012889	CPSF2	100	95.408	MGP_PahariEiJ_G0029791	Cpsf2	100	95.408	Mus_pahari
ENSOARG00000012889	CPSF2	100	95.153	MGP_SPRETEiJ_G0018877	Cpsf2	100	95.153	Mus_spretus
ENSOARG00000012889	CPSF2	100	96.556	ENSMPUG00000007617	CPSF2	98	96.556	Mustela_putorius_furo
ENSOARG00000012889	CPSF2	100	96.046	ENSMLUG00000005570	CPSF2	100	96.046	Myotis_lucifugus
ENSOARG00000012889	CPSF2	100	96.173	ENSNGAG00000020312	Cpsf2	100	96.173	Nannospalax_galili
ENSOARG00000012889	CPSF2	100	82.807	ENSNBRG00000022402	cpsf2	100	82.807	Neolamprologus_brichardi
ENSOARG00000012889	CPSF2	100	95.663	ENSNLEG00000017132	CPSF2	100	95.663	Nomascus_leucogenys
ENSOARG00000012889	CPSF2	91	98.507	ENSMEUG00000008138	CPSF2	91	98.507	Notamacropus_eugenii
ENSOARG00000012889	CPSF2	93	88.283	ENSOPRG00000008484	-	100	88.283	Ochotona_princeps
ENSOARG00000012889	CPSF2	100	96.301	ENSODEG00000008682	CPSF2	100	96.301	Octodon_degus
ENSOARG00000012889	CPSF2	100	83.186	ENSONIG00000005901	cpsf2	100	83.186	Oreochromis_niloticus
ENSOARG00000012889	CPSF2	100	95.408	ENSOANG00000003822	CPSF2	100	95.408	Ornithorhynchus_anatinus
ENSOARG00000012889	CPSF2	100	96.429	ENSOCUG00000005713	CPSF2	100	96.429	Oryctolagus_cuniculus
ENSOARG00000012889	CPSF2	100	77.118	ENSORLG00000011628	cpsf2	100	77.118	Oryzias_latipes
ENSOARG00000012889	CPSF2	100	81.922	ENSORLG00020016980	cpsf2	100	81.922	Oryzias_latipes_hni
ENSOARG00000012889	CPSF2	100	81.922	ENSORLG00015011910	cpsf2	100	81.922	Oryzias_latipes_hsok
ENSOARG00000012889	CPSF2	100	81.163	ENSOMEG00000022876	cpsf2	100	81.163	Oryzias_melastigma
ENSOARG00000012889	CPSF2	100	96.556	ENSPPAG00000039666	CPSF2	100	96.556	Pan_paniscus
ENSOARG00000012889	CPSF2	99	96.424	ENSPPRG00000010869	CPSF2	100	96.424	Panthera_pardus
ENSOARG00000012889	CPSF2	100	96.429	ENSPTIG00000021202	CPSF2	100	96.429	Panthera_tigris_altaica
ENSOARG00000012889	CPSF2	100	96.556	ENSPTRG00000006651	CPSF2	100	96.556	Pan_troglodytes
ENSOARG00000012889	CPSF2	100	96.684	ENSPANG00000017417	CPSF2	100	96.684	Papio_anubis
ENSOARG00000012889	CPSF2	100	79.087	ENSPKIG00000021453	cpsf2	100	79.087	Paramormyrops_kingsleyae
ENSOARG00000012889	CPSF2	100	92.994	ENSPSIG00000006289	CPSF2	100	92.994	Pelodiscus_sinensis
ENSOARG00000012889	CPSF2	75	76.080	ENSPMGG00000002511	cpsf2	100	76.246	Periophthalmus_magnuspinnatus
ENSOARG00000012889	CPSF2	100	95.918	ENSPEMG00000007917	Cpsf2	100	95.918	Peromyscus_maniculatus_bairdii
ENSOARG00000012889	CPSF2	100	71.375	ENSPMAG00000006205	cpsf2	100	71.375	Petromyzon_marinus
ENSOARG00000012889	CPSF2	100	95.791	ENSPCIG00000011393	CPSF2	100	95.791	Phascolarctos_cinereus
ENSOARG00000012889	CPSF2	100	82.427	ENSPFOG00000018648	cpsf2	100	82.427	Poecilia_formosa
ENSOARG00000012889	CPSF2	100	82.427	ENSPLAG00000019199	cpsf2	99	82.427	Poecilia_latipinna
ENSOARG00000012889	CPSF2	96	82.677	ENSPMEG00000012100	cpsf2	100	82.000	Poecilia_mexicana
ENSOARG00000012889	CPSF2	100	82.301	ENSPREG00000008960	cpsf2	100	82.301	Poecilia_reticulata
ENSOARG00000012889	CPSF2	65	99.395	ENSPPYG00000029685	-	100	99.395	Pongo_abelii
ENSOARG00000012889	CPSF2	100	96.301	ENSPCAG00000012477	CPSF2	100	96.301	Procavia_capensis
ENSOARG00000012889	CPSF2	100	96.556	ENSPCOG00000026387	CPSF2	99	99.669	Propithecus_coquereli
ENSOARG00000012889	CPSF2	67	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSOARG00000012889	CPSF2	100	82.449	ENSPNYG00000023356	cpsf2	100	82.449	Pundamilia_nyererei
ENSOARG00000012889	CPSF2	100	83.904	ENSPNAG00000001849	cpsf2	100	83.904	Pygocentrus_nattereri
ENSOARG00000012889	CPSF2	100	95.536	ENSRNOG00000005733	Cpsf2	100	95.536	Rattus_norvegicus
ENSOARG00000012889	CPSF2	100	96.684	ENSRBIG00000044792	CPSF2	100	96.684	Rhinopithecus_bieti
ENSOARG00000012889	CPSF2	100	96.684	ENSRROG00000034875	CPSF2	100	96.684	Rhinopithecus_roxellana
ENSOARG00000012889	CPSF2	100	96.556	ENSSBOG00000024571	CPSF2	100	96.556	Saimiri_boliviensis_boliviensis
ENSOARG00000012889	CPSF2	100	95.918	ENSSHAG00000010458	CPSF2	100	95.918	Sarcophilus_harrisii
ENSOARG00000012889	CPSF2	100	84.157	ENSSFOG00015002117	cpsf2	100	84.157	Scleropages_formosus
ENSOARG00000012889	CPSF2	100	81.163	ENSSMAG00000002001	cpsf2	100	81.163	Scophthalmus_maximus
ENSOARG00000012889	CPSF2	100	83.312	ENSSDUG00000004084	cpsf2	100	83.312	Seriola_dumerili
ENSOARG00000012889	CPSF2	100	82.807	ENSSLDG00000024330	cpsf2	100	82.807	Seriola_lalandi_dorsalis
ENSOARG00000012889	CPSF2	57	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSOARG00000012889	CPSF2	100	93.121	ENSSPUG00000013485	CPSF2	100	93.121	Sphenodon_punctatus
ENSOARG00000012889	CPSF2	100	82.301	ENSSPAG00000013284	cpsf2	100	82.301	Stegastes_partitus
ENSOARG00000012889	CPSF2	100	96.429	ENSSSCG00000002447	CPSF2	100	96.429	Sus_scrofa
ENSOARG00000012889	CPSF2	100	93.758	ENSTGUG00000012571	-	100	93.758	Taeniopygia_guttata
ENSOARG00000012889	CPSF2	100	81.669	ENSTRUG00000003742	cpsf2	100	81.669	Takifugu_rubripes
ENSOARG00000012889	CPSF2	100	80.580	ENSTNIG00000012228	cpsf2	100	81.337	Tetraodon_nigroviridis
ENSOARG00000012889	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSOARG00000012889	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSOARG00000012889	CPSF2	100	96.684	ENSUAMG00000028071	CPSF2	100	96.684	Ursus_americanus
ENSOARG00000012889	CPSF2	100	96.684	ENSUMAG00000005029	CPSF2	100	99.669	Ursus_maritimus
ENSOARG00000012889	CPSF2	99	96.552	ENSVPAG00000003503	CPSF2	100	96.552	Vicugna_pacos
ENSOARG00000012889	CPSF2	100	96.556	ENSVVUG00000024642	CPSF2	100	96.556	Vulpes_vulpes
ENSOARG00000012889	CPSF2	100	89.172	ENSXETG00000010289	cpsf2	100	89.172	Xenopus_tropicalis
ENSOARG00000012889	CPSF2	100	82.807	ENSXCOG00000001764	cpsf2	100	82.807	Xiphophorus_couchianus
ENSOARG00000012889	CPSF2	100	82.933	ENSXMAG00000017048	cpsf2	100	82.933	Xiphophorus_maculatus