EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000013011 (Gene tree)
Gene ID: 101114887
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 35556 bases
Position: chr12:53326659-53362214
Accession: 101114887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000013939	zf-CCCH	PF00642.24	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000014145	RC3H1-201	3737	XM_004013812	ENSOARP00000013939	1140 (aa)	XP_004013861	W5PU08

Gene Model

Click here to download ENSOARG00000013011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000013011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000013011	RC3H1	92	53.902	ENSOARG00000013965	RC3H2	87	53.712

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000013011	RC3H1	100	96.491	ENSG00000135870	RC3H1	100	96.491	Homo_sapiens
ENSOARG00000013011	RC3H1	100	96.404	ENSAMEG00000015657	RC3H1	100	96.404	Ailuropoda_melanoleuca
ENSOARG00000013011	RC3H1	100	88.261	ENSAPLG00000005341	RC3H1	100	87.728	Anas_platyrhynchos
ENSOARG00000013011	RC3H1	100	84.549	ENSACAG00000015271	RC3H1	100	84.174	Anolis_carolinensis
ENSOARG00000013011	RC3H1	100	96.404	ENSANAG00000036716	RC3H1	100	96.404	Aotus_nancymaae
ENSOARG00000013011	RC3H1	100	97.456	ENSBTAG00000052708	RC3H1	100	97.456	Bos_taurus
ENSOARG00000013011	RC3H1	100	96.053	ENSCJAG00000009106	RC3H1	100	96.053	Callithrix_jacchus
ENSOARG00000013011	RC3H1	100	96.404	ENSCAFG00000014434	RC3H1	100	96.404	Canis_familiaris
ENSOARG00000013011	RC3H1	100	96.319	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSOARG00000013011	RC3H1	100	98.158	ENSCHIG00000002873	RC3H1	100	98.158	Capra_hircus
ENSOARG00000013011	RC3H1	99	94.469	ENSTSYG00000003913	RC3H1	99	94.469	Carlito_syrichta
ENSOARG00000013011	RC3H1	100	90.798	ENSCPOG00000004349	RC3H1	100	90.535	Cavia_porcellus
ENSOARG00000013011	RC3H1	100	94.035	ENSCCAG00000025652	RC3H1	98	96.092	Cebus_capucinus
ENSOARG00000013011	RC3H1	100	96.754	ENSCATG00000033497	RC3H1	100	96.754	Cercocebus_atys
ENSOARG00000013011	RC3H1	100	94.040	ENSCLAG00000011267	RC3H1	100	94.040	Chinchilla_lanigera
ENSOARG00000013011	RC3H1	95	97.056	ENSCSAG00000011823	RC3H1	84	97.056	Chlorocebus_sabaeus
ENSOARG00000013011	RC3H1	100	89.102	ENSCPBG00000014670	RC3H1	100	88.666	Chrysemys_picta_bellii
ENSOARG00000013011	RC3H1	100	96.842	ENSCANG00000032120	RC3H1	100	96.842	Colobus_angolensis_palliatus
ENSOARG00000013011	RC3H1	100	93.509	ENSCGRG00001020812	Rc3h1	100	93.070	Cricetulus_griseus_chok1gshd
ENSOARG00000013011	RC3H1	100	93.509	ENSCGRG00000011952	Rc3h1	100	93.070	Cricetulus_griseus_crigri
ENSOARG00000013011	RC3H1	55	93.930	ENSDNOG00000011494	RC3H1	99	93.930	Dasypus_novemcinctus
ENSOARG00000013011	RC3H1	100	95.000	ENSDORG00000004855	Rc3h1	100	95.000	Dipodomys_ordii
ENSOARG00000013011	RC3H1	81	96.168	ENSETEG00000012064	RC3H1	87	96.168	Echinops_telfairi
ENSOARG00000013011	RC3H1	100	95.088	ENSEASG00005017000	RC3H1	100	95.088	Equus_asinus_asinus
ENSOARG00000013011	RC3H1	100	94.912	ENSECAG00000021208	RC3H1	100	94.912	Equus_caballus
ENSOARG00000013011	RC3H1	83	95.378	ENSEEUG00000014861	RC3H1	93	82.560	Erinaceus_europaeus
ENSOARG00000013011	RC3H1	100	96.667	ENSFCAG00000014924	RC3H1	100	96.667	Felis_catus
ENSOARG00000013011	RC3H1	100	87.228	ENSFALG00000002947	RC3H1	100	86.087	Ficedula_albicollis
ENSOARG00000013011	RC3H1	100	94.566	ENSFDAG00000013303	RC3H1	100	94.566	Fukomys_damarensis
ENSOARG00000013011	RC3H1	100	87.010	ENSGALG00000004587	RC3H1	100	86.475	Gallus_gallus
ENSOARG00000013011	RC3H1	100	87.271	ENSGAGG00000018194	RC3H1	100	87.184	Gopherus_agassizii
ENSOARG00000013011	RC3H1	100	89.598	ENSGGOG00000005735	RC3H1	100	89.598	Gorilla_gorilla
ENSOARG00000013011	RC3H1	88	88.769	ENSHGLG00000004183	-	99	88.723	Heterocephalus_glaber_female
ENSOARG00000013011	RC3H1	100	94.040	ENSHGLG00100008577	RC3H1	100	94.040	Heterocephalus_glaber_male
ENSOARG00000013011	RC3H1	100	95.706	ENSSTOG00000016033	RC3H1	100	95.706	Ictidomys_tridecemlineatus
ENSOARG00000013011	RC3H1	100	94.035	ENSJJAG00000018915	Rc3h1	100	93.772	Jaculus_jaculus
ENSOARG00000013011	RC3H1	100	74.244	ENSLACG00000016186	RC3H1	99	77.521	Latimeria_chalumnae
ENSOARG00000013011	RC3H1	97	96.199	ENSLAFG00000004367	RC3H1	100	96.199	Loxodonta_africana
ENSOARG00000013011	RC3H1	100	96.579	ENSMFAG00000033725	RC3H1	100	96.579	Macaca_fascicularis
ENSOARG00000013011	RC3H1	100	96.491	ENSMMUG00000000630	RC3H1	100	96.491	Macaca_mulatta
ENSOARG00000013011	RC3H1	100	96.667	ENSMNEG00000035968	RC3H1	100	96.667	Macaca_nemestrina
ENSOARG00000013011	RC3H1	100	96.579	ENSMLEG00000037455	RC3H1	100	96.579	Mandrillus_leucophaeus
ENSOARG00000013011	RC3H1	97	93.775	ENSMAUG00000020864	Rc3h1	100	93.273	Mesocricetus_auratus
ENSOARG00000013011	RC3H1	100	96.316	ENSMICG00000003000	RC3H1	100	96.316	Microcebus_murinus
ENSOARG00000013011	RC3H1	93	91.910	ENSMOCG00000016587	Rc3h1	98	91.533	Microtus_ochrogaster
ENSOARG00000013011	RC3H1	100	91.586	ENSMODG00000004289	RC3H1	100	91.674	Monodelphis_domestica
ENSOARG00000013011	RC3H1	100	92.719	MGP_CAROLIEiJ_G0014756	Rc3h1	100	92.281	Mus_caroli
ENSOARG00000013011	RC3H1	100	92.544	ENSMUSG00000040423	Rc3h1	100	92.105	Mus_musculus
ENSOARG00000013011	RC3H1	100	92.456	MGP_PahariEiJ_G0027992	Rc3h1	100	92.018	Mus_pahari
ENSOARG00000013011	RC3H1	100	92.368	MGP_SPRETEiJ_G0015563	Rc3h1	100	91.930	Mus_spretus
ENSOARG00000013011	RC3H1	100	95.793	ENSMPUG00000004747	RC3H1	100	95.793	Mustela_putorius_furo
ENSOARG00000013011	RC3H1	100	94.825	ENSMLUG00000011127	RC3H1	100	94.825	Myotis_lucifugus
ENSOARG00000013011	RC3H1	100	94.825	ENSNGAG00000011135	Rc3h1	100	94.386	Nannospalax_galili
ENSOARG00000013011	RC3H1	100	96.491	ENSNLEG00000015327	RC3H1	100	96.491	Nomascus_leucogenys
ENSOARG00000013011	RC3H1	99	81.810	ENSOPRG00000013068	RC3H1	99	81.898	Ochotona_princeps
ENSOARG00000013011	RC3H1	100	93.690	ENSODEG00000014185	RC3H1	100	93.690	Octodon_degus
ENSOARG00000013011	RC3H1	100	91.282	ENSOANG00000000924	RC3H1	100	91.194	Ornithorhynchus_anatinus
ENSOARG00000013011	RC3H1	99	95.107	ENSOCUG00000004930	RC3H1	98	95.107	Oryctolagus_cuniculus
ENSOARG00000013011	RC3H1	100	89.405	ENSOGAG00000004044	RC3H1	100	89.405	Otolemur_garnettii
ENSOARG00000013011	RC3H1	100	96.667	ENSPPAG00000039253	RC3H1	100	96.667	Pan_paniscus
ENSOARG00000013011	RC3H1	100	95.789	ENSPPRG00000009007	RC3H1	100	95.789	Panthera_pardus
ENSOARG00000013011	RC3H1	100	96.157	ENSPTIG00000015326	RC3H1	100	96.157	Panthera_tigris_altaica
ENSOARG00000013011	RC3H1	100	96.667	ENSPTRG00000001702	RC3H1	100	96.667	Pan_troglodytes
ENSOARG00000013011	RC3H1	100	96.579	ENSPANG00000008886	RC3H1	100	96.579	Papio_anubis
ENSOARG00000013011	RC3H1	100	88.589	ENSPSIG00000016181	RC3H1	100	88.763	Pelodiscus_sinensis
ENSOARG00000013011	RC3H1	100	93.070	ENSPEMG00000011966	Rc3h1	100	92.544	Peromyscus_maniculatus_bairdii
ENSOARG00000013011	RC3H1	69	94.051	ENSPCIG00000002058	RC3H1	95	98.655	Phascolarctos_cinereus
ENSOARG00000013011	RC3H1	100	93.070	ENSPPYG00000000490	RC3H1	98	95.806	Pongo_abelii
ENSOARG00000013011	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSOARG00000013011	RC3H1	83	95.546	ENSPCOG00000021795	RC3H1	96	95.546	Propithecus_coquereli
ENSOARG00000013011	RC3H1	100	87.368	ENSPVAG00000007593	RC3H1	100	87.368	Pteropus_vampyrus
ENSOARG00000013011	RC3H1	97	61.004	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSOARG00000013011	RC3H1	100	96.754	ENSRBIG00000037743	RC3H1	100	96.754	Rhinopithecus_bieti
ENSOARG00000013011	RC3H1	100	96.491	ENSRROG00000036546	RC3H1	100	96.491	Rhinopithecus_roxellana
ENSOARG00000013011	RC3H1	93	86.077	ENSSBOG00000010664	RC3H1	100	89.840	Saimiri_boliviensis_boliviensis
ENSOARG00000013011	RC3H1	100	90.622	ENSSHAG00000007589	RC3H1	100	90.710	Sarcophilus_harrisii
ENSOARG00000013011	RC3H1	87	86.486	ENSSARG00000004660	RC3H1	86	86.486	Sorex_araneus
ENSOARG00000013011	RC3H1	100	83.812	ENSSPUG00000018472	RC3H1	100	83.188	Sphenodon_punctatus
ENSOARG00000013011	RC3H1	100	96.491	ENSSSCG00000015498	RC3H1	100	96.491	Sus_scrofa
ENSOARG00000013011	RC3H1	100	87.446	ENSTGUG00000004090	RC3H1	100	86.736	Taeniopygia_guttata
ENSOARG00000013011	RC3H1	93	90.471	ENSTBEG00000005015	RC3H1	93	90.471	Tupaia_belangeri
ENSOARG00000013011	RC3H1	100	96.497	ENSTTRG00000008572	RC3H1	100	96.497	Tursiops_truncatus
ENSOARG00000013011	RC3H1	100	95.439	ENSUAMG00000019525	RC3H1	100	95.439	Ursus_americanus
ENSOARG00000013011	RC3H1	100	96.140	ENSUMAG00000020087	RC3H1	100	96.140	Ursus_maritimus
ENSOARG00000013011	RC3H1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSOARG00000013011	RC3H1	100	96.066	ENSVVUG00000014201	RC3H1	100	96.066	Vulpes_vulpes
ENSOARG00000013011	RC3H1	100	78.528	ENSXETG00000020030	rc3h1	100	77.903	Xenopus_tropicalis