EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000013174 (Gene tree)
Gene ID: 101117440
Gene Symbol: SNAI1
Alias: -
Full Name: snail family transcriptional repressor 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 6064 bases
Position: chr13:77579049-77585112
Accession: 101117440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000014113	zf-C2H2	PF00096.26	9.5e-21	1	4
ENSOARP00000014113	zf-C2H2	PF00096.26	9.5e-21	2	4
ENSOARP00000014113	zf-C2H2	PF00096.26	9.5e-21	3	4
ENSOARP00000014113	zf-C2H2	PF00096.26	9.5e-21	4	4
ENSOARP00000014113	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000014320	SNAI1-201	1074	XM_004014881	ENSOARP00000014113	348 (aa)	XP_004014930	W5PUI1

Gene Model

Click here to download ENSOARG00000013174's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000013174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000013174	SNAI1	65	40.566	ENSOARG00000008496	ZNF646	79	40.566
ENSOARG00000013174	SNAI1	52	42.268	ENSOARG00000012765	-	76	42.268
ENSOARG00000013174	SNAI1	63	55.085	ENSOARG00000013030	SNAI2	85	56.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000013174	SNAI1	71	87.045	ENSG00000124216	SNAI1	94	84.615	Homo_sapiens
ENSOARG00000013174	SNAI1	63	57.576	ENSAPOG00000003886	snai2	66	56.710	Acanthochromis_polyacanthus
ENSOARG00000013174	SNAI1	71	92.713	ENSAMEG00000013478	SNAI1	94	89.879	Ailuropoda_melanoleuca
ENSOARG00000013174	SNAI1	58	54.378	ENSACIG00000009443	-	79	52.804	Amphilophus_citrinellus
ENSOARG00000013174	SNAI1	63	58.009	ENSACIG00000018641	snai2	84	57.143	Amphilophus_citrinellus
ENSOARG00000013174	SNAI1	63	58.009	ENSAOCG00000017968	snai2	84	57.143	Amphiprion_ocellaris
ENSOARG00000013174	SNAI1	63	58.009	ENSAPEG00000002983	snai2	84	57.143	Amphiprion_percula
ENSOARG00000013174	SNAI1	60	57.466	ENSATEG00000006892	snai2	84	57.576	Anabas_testudineus
ENSOARG00000013174	SNAI1	62	56.034	ENSAPLG00000003920	-	86	55.085	Anas_platyrhynchos
ENSOARG00000013174	SNAI1	63	65.455	ENSAPLG00000014633	-	93	66.516	Anas_platyrhynchos
ENSOARG00000013174	SNAI1	62	56.769	ENSACAG00000012332	-	86	55.085	Anolis_carolinensis
ENSOARG00000013174	SNAI1	63	56.828	ENSACAG00000015607	SNAI1	89	55.365	Anolis_carolinensis
ENSOARG00000013174	SNAI1	71	87.854	ENSANAG00000028666	SNAI1	94	85.020	Aotus_nancymaae
ENSOARG00000013174	SNAI1	63	60.731	ENSACLG00000018551	snai2	83	60.731	Astatotilapia_calliptera
ENSOARG00000013174	SNAI1	66	57.261	ENSAMXG00000038235	snai2	88	55.187	Astyanax_mexicanus
ENSOARG00000013174	SNAI1	71	97.571	ENSBTAG00000014554	SNAI1	94	97.571	Bos_taurus
ENSOARG00000013174	SNAI1	71	87.045	ENSCJAG00000000518	SNAI1	94	83.806	Callithrix_jacchus
ENSOARG00000013174	SNAI1	68	94.093	ENSCAFG00000011499	SNAI1	100	91.139	Canis_familiaris
ENSOARG00000013174	SNAI1	71	92.308	ENSCAFG00020017479	SNAI1	94	89.474	Canis_lupus_dingo
ENSOARG00000013174	SNAI1	71	97.976	ENSCHIG00000014308	SNAI1	94	97.976	Capra_hircus
ENSOARG00000013174	SNAI1	71	88.259	ENSTSYG00000010834	SNAI1	94	85.425	Carlito_syrichta
ENSOARG00000013174	SNAI1	68	88.983	ENSCAPG00000014002	SNAI1	92	86.864	Cavia_aperea
ENSOARG00000013174	SNAI1	63	54.468	ENSCPOG00000033449	-	86	55.144	Cavia_porcellus
ENSOARG00000013174	SNAI1	71	87.449	ENSCPOG00000026663	SNAI1	94	85.425	Cavia_porcellus
ENSOARG00000013174	SNAI1	71	88.259	ENSCCAG00000029550	SNAI1	94	85.425	Cebus_capucinus
ENSOARG00000013174	SNAI1	71	88.259	ENSCATG00000041452	SNAI1	94	85.020	Cercocebus_atys
ENSOARG00000013174	SNAI1	71	88.259	ENSCLAG00000012285	SNAI1	94	86.235	Chinchilla_lanigera
ENSOARG00000013174	SNAI1	71	88.259	ENSCSAG00000015065	SNAI1	94	85.020	Chlorocebus_sabaeus
ENSOARG00000013174	SNAI1	63	54.894	ENSCHOG00000007046	-	88	55.556	Choloepus_hoffmanni
ENSOARG00000013174	SNAI1	71	87.854	ENSCANG00000036400	SNAI1	94	84.615	Colobus_angolensis_palliatus
ENSOARG00000013174	SNAI1	71	84.211	ENSCGRG00001007749	Snai1	94	81.781	Cricetulus_griseus_chok1gshd
ENSOARG00000013174	SNAI1	71	84.211	ENSCGRG00000009080	Snai1	94	81.781	Cricetulus_griseus_crigri
ENSOARG00000013174	SNAI1	63	56.140	ENSCSEG00000010311	snai2	84	55.603	Cynoglossus_semilaevis
ENSOARG00000013174	SNAI1	63	56.957	ENSCVAG00000016483	snai2	81	56.388	Cyprinodon_variegatus
ENSOARG00000013174	SNAI1	66	59.167	ENSDARG00000040046	snai2	88	57.083	Danio_rerio
ENSOARG00000013174	SNAI1	71	90.283	ENSDNOG00000023834	-	94	87.854	Dasypus_novemcinctus
ENSOARG00000013174	SNAI1	70	73.577	ENSDNOG00000024891	-	93	73.577	Dasypus_novemcinctus
ENSOARG00000013174	SNAI1	63	54.894	ENSDNOG00000035997	-	86	55.556	Dasypus_novemcinctus
ENSOARG00000013174	SNAI1	68	85.833	ENSDORG00000025372	Snai1	100	82.917	Dipodomys_ordii
ENSOARG00000013174	SNAI1	63	50.427	ENSETEG00000005777	-	87	49.583	Echinops_telfairi
ENSOARG00000013174	SNAI1	63	55.085	ENSEASG00005009186	-	86	55.696	Equus_asinus_asinus
ENSOARG00000013174	SNAI1	63	55.085	ENSECAG00000010120	SNAI2	86	55.696	Equus_caballus
ENSOARG00000013174	SNAI1	71	91.935	ENSECAG00000009787	SNAI1	94	89.113	Equus_caballus
ENSOARG00000013174	SNAI1	71	91.498	ENSFCAG00000010558	SNAI1	94	88.664	Felis_catus
ENSOARG00000013174	SNAI1	63	54.468	ENSFCAG00000015779	-	86	52.720	Felis_catus
ENSOARG00000013174	SNAI1	62	56.034	ENSFALG00000005762	-	86	55.085	Ficedula_albicollis
ENSOARG00000013174	SNAI1	71	89.879	ENSFDAG00000005851	SNAI1	94	87.854	Fukomys_damarensis
ENSOARG00000013174	SNAI1	63	56.957	ENSFHEG00000012561	snai2	84	57.143	Fundulus_heteroclitus
ENSOARG00000013174	SNAI1	67	55.645	ENSGMOG00000002669	snai2	90	54.508	Gadus_morhua
ENSOARG00000013174	SNAI1	64	63.839	ENSGALG00000008018	SNAI1	85	64.035	Gallus_gallus
ENSOARG00000013174	SNAI1	50	66.667	ENSGALG00000030902	-	50	79.412	Gallus_gallus
ENSOARG00000013174	SNAI1	63	56.957	ENSGAFG00000021427	snai2	84	57.143	Gambusia_affinis
ENSOARG00000013174	SNAI1	63	54.585	ENSGACG00000017935	snai2	84	54.936	Gasterosteus_aculeatus
ENSOARG00000013174	SNAI1	63	62.832	ENSGAGG00000022705	SNAI1	87	62.389	Gopherus_agassizii
ENSOARG00000013174	SNAI1	71	88.259	ENSGGOG00000024422	SNAI1	94	85.425	Gorilla_gorilla
ENSOARG00000013174	SNAI1	63	60.731	ENSHBUG00000007764	snai2	83	60.731	Haplochromis_burtoni
ENSOARG00000013174	SNAI1	63	54.468	ENSHGLG00000009439	SNAI2	50	78.417	Heterocephalus_glaber_female
ENSOARG00000013174	SNAI1	71	89.879	ENSHGLG00000005310	SNAI1	94	87.449	Heterocephalus_glaber_female
ENSOARG00000013174	SNAI1	71	89.879	ENSHGLG00100018390	SNAI1	94	87.449	Heterocephalus_glaber_male
ENSOARG00000013174	SNAI1	63	54.468	ENSHGLG00100007484	SNAI2	50	78.417	Heterocephalus_glaber_male
ENSOARG00000013174	SNAI1	71	90.283	ENSSTOG00000005866	SNAI1	94	87.449	Ictidomys_tridecemlineatus
ENSOARG00000013174	SNAI1	63	54.043	ENSJJAG00000017495	-	86	55.556	Jaculus_jaculus
ENSOARG00000013174	SNAI1	71	85.772	ENSJJAG00000017317	Snai1	94	86.585	Jaculus_jaculus
ENSOARG00000013174	SNAI1	64	54.545	ENSKMAG00000005164	snai2	85	55.745	Kryptolebias_marmoratus
ENSOARG00000013174	SNAI1	66	54.733	ENSLBEG00000000972	snai2	94	54.918	Labrus_bergylta
ENSOARG00000013174	SNAI1	63	61.304	ENSLACG00000017707	SNAI1	85	58.407	Latimeria_chalumnae
ENSOARG00000013174	SNAI1	62	55.365	ENSLACG00000005413	snai2	84	56.957	Latimeria_chalumnae
ENSOARG00000013174	SNAI1	71	89.069	ENSLAFG00000030265	SNAI1	94	86.235	Loxodonta_africana
ENSOARG00000013174	SNAI1	71	88.259	ENSMFAG00000000994	SNAI1	94	85.020	Macaca_fascicularis
ENSOARG00000013174	SNAI1	71	87.854	ENSMNEG00000036933	SNAI1	94	84.615	Macaca_nemestrina
ENSOARG00000013174	SNAI1	71	88.259	ENSMLEG00000039236	SNAI1	94	85.020	Mandrillus_leucophaeus
ENSOARG00000013174	SNAI1	63	58.009	ENSMAMG00000015632	snai2	84	57.143	Mastacembelus_armatus
ENSOARG00000013174	SNAI1	63	60.731	ENSMZEG00005025060	snai2	83	60.731	Maylandia_zebra
ENSOARG00000013174	SNAI1	64	63.839	ENSMGAG00000009447	SNAI1	85	64.035	Meleagris_gallopavo
ENSOARG00000013174	SNAI1	62	56.034	ENSMGAG00000010813	-	86	55.085	Meleagris_gallopavo
ENSOARG00000013174	SNAI1	71	85.425	ENSMAUG00000021592	Snai1	94	82.591	Mesocricetus_auratus
ENSOARG00000013174	SNAI1	71	89.069	ENSMICG00000042228	SNAI1	94	86.235	Microcebus_murinus
ENSOARG00000013174	SNAI1	63	55.603	ENSMICG00000000335	-	86	55.556	Microcebus_murinus
ENSOARG00000013174	SNAI1	71	86.235	ENSMOCG00000007847	Snai1	94	83.401	Microtus_ochrogaster
ENSOARG00000013174	SNAI1	65	63.598	ENSMODG00000016309	SNAI1	87	64.783	Monodelphis_domestica
ENSOARG00000013174	SNAI1	63	60.731	ENSMALG00000021318	snai2	83	60.731	Monopterus_albus
ENSOARG00000013174	SNAI1	71	85.020	MGP_CAROLIEiJ_G0024709	Snai1	94	82.186	Mus_caroli
ENSOARG00000013174	SNAI1	71	85.020	ENSMUSG00000042821	Snai1	94	82.186	Mus_musculus
ENSOARG00000013174	SNAI1	71	85.020	MGP_PahariEiJ_G0026151	Snai1	94	82.186	Mus_pahari
ENSOARG00000013174	SNAI1	71	85.020	MGP_SPRETEiJ_G0025629	Snai1	94	82.186	Mus_spretus
ENSOARG00000013174	SNAI1	71	93.117	ENSMPUG00000017558	SNAI1	94	90.283	Mustela_putorius_furo
ENSOARG00000013174	SNAI1	71	92.308	ENSMLUG00000015053	-	94	89.474	Myotis_lucifugus
ENSOARG00000013174	SNAI1	70	84.490	ENSMLUG00000011649	-	93	84.490	Myotis_lucifugus
ENSOARG00000013174	SNAI1	71	87.045	ENSNGAG00000017185	Snai1	94	84.211	Nannospalax_galili
ENSOARG00000013174	SNAI1	62	54.506	ENSNGAG00000009442	-	86	53.333	Nannospalax_galili
ENSOARG00000013174	SNAI1	63	60.731	ENSNBRG00000011785	snai2	83	60.731	Neolamprologus_brichardi
ENSOARG00000013174	SNAI1	71	88.664	ENSNLEG00000006985	SNAI1	94	85.830	Nomascus_leucogenys
ENSOARG00000013174	SNAI1	63	54.468	ENSODEG00000003654	-	50	78.417	Octodon_degus
ENSOARG00000013174	SNAI1	70	87.903	ENSODEG00000007856	SNAI1	93	85.887	Octodon_degus
ENSOARG00000013174	SNAI1	63	57.576	ENSONIG00000009542	snai2	84	56.710	Oreochromis_niloticus
ENSOARG00000013174	SNAI1	66	60.324	ENSOANG00000008681	SNAI1	91	60.887	Ornithorhynchus_anatinus
ENSOARG00000013174	SNAI1	68	86.611	ENSOCUG00000005422	SNAI1	98	84.519	Oryctolagus_cuniculus
ENSOARG00000013174	SNAI1	63	54.468	ENSOCUG00000012254	-	86	53.750	Oryctolagus_cuniculus
ENSOARG00000013174	SNAI1	63	58.150	ENSORLG00000017475	snai2	84	57.269	Oryzias_latipes
ENSOARG00000013174	SNAI1	63	58.150	ENSORLG00020008787	snai2	84	57.269	Oryzias_latipes_hni
ENSOARG00000013174	SNAI1	63	58.150	ENSORLG00015008609	snai2	84	57.269	Oryzias_latipes_hsok
ENSOARG00000013174	SNAI1	63	59.361	ENSOMEG00000006591	snai2	83	59.361	Oryzias_melastigma
ENSOARG00000013174	SNAI1	63	54.468	ENSOGAG00000010500	-	86	55.144	Otolemur_garnettii
ENSOARG00000013174	SNAI1	71	88.664	ENSOGAG00000030111	SNAI1	94	85.830	Otolemur_garnettii
ENSOARG00000013174	SNAI1	71	88.259	ENSPPAG00000041096	SNAI1	94	85.425	Pan_paniscus
ENSOARG00000013174	SNAI1	71	91.498	ENSPPRG00000013272	SNAI1	94	88.664	Panthera_pardus
ENSOARG00000013174	SNAI1	71	88.259	ENSPTRG00000050285	SNAI1	94	85.425	Pan_troglodytes
ENSOARG00000013174	SNAI1	71	88.259	ENSPANG00000007536	SNAI1	94	85.020	Papio_anubis
ENSOARG00000013174	SNAI1	63	62.832	ENSPSIG00000003607	SNAI1	84	62.832	Pelodiscus_sinensis
ENSOARG00000013174	SNAI1	71	85.830	ENSPEMG00000023213	Snai1	94	82.996	Peromyscus_maniculatus_bairdii
ENSOARG00000013174	SNAI1	65	64.017	ENSPCIG00000023282	SNAI1	87	64.017	Phascolarctos_cinereus
ENSOARG00000013174	SNAI1	63	56.522	ENSPFOG00000014336	snai2	84	56.710	Poecilia_formosa
ENSOARG00000013174	SNAI1	63	56.522	ENSPLAG00000009941	snai2	84	56.710	Poecilia_latipinna
ENSOARG00000013174	SNAI1	63	56.522	ENSPMEG00000024022	snai2	84	56.710	Poecilia_mexicana
ENSOARG00000013174	SNAI1	71	83.401	ENSPPYG00000011122	SNAI1	94	83.806	Pongo_abelii
ENSOARG00000013174	SNAI1	63	55.328	ENSPCAG00000001788	-	50	78.417	Procavia_capensis
ENSOARG00000013174	SNAI1	68	90.678	ENSPCAG00000011934	SNAI1	99	87.712	Procavia_capensis
ENSOARG00000013174	SNAI1	71	88.664	ENSPCOG00000020538	SNAI1	94	85.830	Propithecus_coquereli
ENSOARG00000013174	SNAI1	71	92.771	ENSPVAG00000004119	SNAI1	94	89.960	Pteropus_vampyrus
ENSOARG00000013174	SNAI1	63	60.731	ENSPNYG00000015217	snai2	83	60.731	Pundamilia_nyererei
ENSOARG00000013174	SNAI1	66	57.377	ENSPNAG00000015896	snai2	88	57.377	Pygocentrus_nattereri
ENSOARG00000013174	SNAI1	71	85.425	ENSRNOG00000009594	Snai1	98	82.329	Rattus_norvegicus
ENSOARG00000013174	SNAI1	63	56.897	ENSRNOG00000047699	Snai2	86	54.661	Rattus_norvegicus
ENSOARG00000013174	SNAI1	71	87.449	ENSRBIG00000026992	SNAI1	94	84.211	Rhinopithecus_bieti
ENSOARG00000013174	SNAI1	71	87.449	ENSRROG00000043753	SNAI1	94	84.211	Rhinopithecus_roxellana
ENSOARG00000013174	SNAI1	71	87.500	ENSSBOG00000034760	SNAI1	94	84.274	Saimiri_boliviensis_boliviensis
ENSOARG00000013174	SNAI1	65	64.783	ENSSHAG00000011015	SNAI1	87	64.348	Sarcophilus_harrisii
ENSOARG00000013174	SNAI1	63	57.848	ENSSFOG00015021578	snai1a	53	72.263	Scleropages_formosus
ENSOARG00000013174	SNAI1	63	57.391	ENSSMAG00000019364	snai2	84	56.828	Scophthalmus_maximus
ENSOARG00000013174	SNAI1	63	57.576	ENSSDUG00000018060	snai2	84	56.277	Seriola_dumerili
ENSOARG00000013174	SNAI1	63	60.731	ENSSLDG00000012852	snai2	83	60.731	Seriola_lalandi_dorsalis
ENSOARG00000013174	SNAI1	63	60.086	ENSSPUG00000018057	SNAI1	85	59.111	Sphenodon_punctatus
ENSOARG00000013174	SNAI1	63	58.009	ENSSPAG00000022061	snai2	84	57.143	Stegastes_partitus
ENSOARG00000013174	SNAI1	71	94.737	ENSSSCG00000032613	SNAI1	96	92.917	Sus_scrofa
ENSOARG00000013174	SNAI1	62	56.034	ENSTGUG00000010914	-	86	55.085	Taeniopygia_guttata
ENSOARG00000013174	SNAI1	63	63.636	ENSTGUG00000008724	SNAI1	84	63.636	Taeniopygia_guttata
ENSOARG00000013174	SNAI1	63	57.391	ENSTRUG00000025588	snai2	84	56.710	Takifugu_rubripes
ENSOARG00000013174	SNAI1	63	57.143	ENSTNIG00000008504	snai2	84	56.388	Tetraodon_nigroviridis
ENSOARG00000013174	SNAI1	55	85.417	ENSTBEG00000012262	SNAI1	97	87.500	Tupaia_belangeri
ENSOARG00000013174	SNAI1	71	95.951	ENSTTRG00000002029	SNAI1	94	95.951	Tursiops_truncatus
ENSOARG00000013174	SNAI1	71	83.740	ENSUAMG00000026603	SNAI1	93	84.553	Ursus_americanus
ENSOARG00000013174	SNAI1	68	94.492	ENSUMAG00000024458	SNAI1	96	91.525	Ursus_maritimus
ENSOARG00000013174	SNAI1	71	92.308	ENSVVUG00000022410	SNAI1	94	89.474	Vulpes_vulpes
ENSOARG00000013174	SNAI1	64	59.483	ENSXETG00000027366	snai1	87	56.540	Xenopus_tropicalis
ENSOARG00000013174	SNAI1	63	56.522	ENSXCOG00000015084	snai2	84	56.710	Xiphophorus_couchianus
ENSOARG00000013174	SNAI1	63	56.522	ENSXMAG00000019030	snai2	84	56.710	Xiphophorus_maculatus