EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000013239 (Gene tree)
Gene ID: 101107033
Gene Symbol: CASC3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 19705 bases
Position: chr11:40011265-40030969
Accession: 101107033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000014189	Btz	PF09405.10	8.7e-24	1	1
ENSOARP00000014190	Btz	PF09405.10	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000014397	CASC3-202	2415	-	ENSOARP00000014190	804 (aa)	-	W5PUQ8
ENSOART00000014396	CASC3-201	2409	XM_004012858	ENSOARP00000014189	703 (aa)	XP_004012907	W5PUQ7

Gene Model

Click here to download ENSOARG00000013239's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03013	RNA transport	KEGG
oas03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000013239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000013239	CASC3	100	93.172	ENSG00000108349	CASC3	100	93.172	Homo_sapiens
ENSOARG00000013239	CASC3	100	95.733	ENSAMEG00000007764	CASC3	100	95.733	Ailuropoda_melanoleuca
ENSOARG00000013239	CASC3	84	53.698	ENSAOCG00000016676	casc3	77	53.922	Amphiprion_ocellaris
ENSOARG00000013239	CASC3	75	53.698	ENSAPEG00000006787	casc3	77	53.922	Amphiprion_percula
ENSOARG00000013239	CASC3	74	54.747	ENSATEG00000017196	casc3	69	54.800	Anabas_testudineus
ENSOARG00000013239	CASC3	91	73.385	ENSACAG00000002674	CASC3	99	68.313	Anolis_carolinensis
ENSOARG00000013239	CASC3	66	97.642	ENSANAG00000031954	-	100	97.642	Aotus_nancymaae
ENSOARG00000013239	CASC3	99	81.988	ENSANAG00000034820	-	99	86.431	Aotus_nancymaae
ENSOARG00000013239	CASC3	100	99.431	ENSBTAG00000006250	CASC3	100	99.431	Bos_taurus
ENSOARG00000013239	CASC3	100	91.607	ENSCJAG00000016032	CASC3	100	91.607	Callithrix_jacchus
ENSOARG00000013239	CASC3	100	96.159	ENSCAFG00000016141	CASC3	100	96.159	Canis_familiaris
ENSOARG00000013239	CASC3	100	95.170	ENSCAFG00020018882	CASC3	100	95.575	Canis_lupus_dingo
ENSOARG00000013239	CASC3	100	98.578	ENSCHIG00000006338	CASC3	100	98.578	Capra_hircus
ENSOARG00000013239	CASC3	100	88.193	ENSTSYG00000002975	CASC3	100	88.193	Carlito_syrichta
ENSOARG00000013239	CASC3	88	88.961	ENSCAPG00000010514	CASC3	100	88.961	Cavia_aperea
ENSOARG00000013239	CASC3	100	88.336	ENSCPOG00000015139	CASC3	100	88.193	Cavia_porcellus
ENSOARG00000013239	CASC3	100	91.903	ENSCCAG00000033620	CASC3	100	92.045	Cebus_capucinus
ENSOARG00000013239	CASC3	100	94.034	ENSCATG00000033593	CASC3	100	94.034	Cercocebus_atys
ENSOARG00000013239	CASC3	100	89.758	ENSCLAG00000013730	CASC3	100	89.616	Chinchilla_lanigera
ENSOARG00000013239	CASC3	100	94.034	ENSCSAG00000002777	CASC3	100	94.034	Chlorocebus_sabaeus
ENSOARG00000013239	CASC3	99	74.755	ENSCPBG00000004750	CASC3	99	74.755	Chrysemys_picta_bellii
ENSOARG00000013239	CASC3	100	93.892	ENSCANG00000008814	CASC3	100	93.892	Colobus_angolensis_palliatus
ENSOARG00000013239	CASC3	100	92.319	ENSCGRG00001014706	Casc3	100	92.176	Cricetulus_griseus_chok1gshd
ENSOARG00000013239	CASC3	100	85.206	ENSCGRG00000001952	Casc3	96	92.135	Cricetulus_griseus_crigri
ENSOARG00000013239	CASC3	83	51.757	ENSCSEG00000010047	casc3	76	51.485	Cynoglossus_semilaevis
ENSOARG00000013239	CASC3	100	94.026	ENSDNOG00000017249	CASC3	97	93.521	Dasypus_novemcinctus
ENSOARG00000013239	CASC3	100	86.629	ENSETEG00000013720	CASC3	100	86.486	Echinops_telfairi
ENSOARG00000013239	CASC3	99	37.716	ENSEBUG00000010654	casc3	98	37.616	Eptatretus_burgeri
ENSOARG00000013239	CASC3	100	94.894	ENSEASG00005002909	CASC3	100	95.858	Equus_asinus_asinus
ENSOARG00000013239	CASC3	100	96.159	ENSECAG00000019947	CASC3	98	90.518	Equus_caballus
ENSOARG00000013239	CASC3	73	90.234	ENSEEUG00000014253	CASC3	100	90.234	Erinaceus_europaeus
ENSOARG00000013239	CASC3	100	95.590	ENSFCAG00000014998	CASC3	100	95.590	Felis_catus
ENSOARG00000013239	CASC3	88	74.022	ENSFALG00000000412	CASC3	98	74.214	Ficedula_albicollis
ENSOARG00000013239	CASC3	93	87.367	ENSFDAG00000020696	CASC3	100	87.062	Fukomys_damarensis
ENSOARG00000013239	CASC3	75	54.747	ENSFHEG00000015793	casc3	77	53.846	Fundulus_heteroclitus
ENSOARG00000013239	CASC3	90	76.730	ENSGALG00000031813	CASC3	99	71.449	Gallus_gallus
ENSOARG00000013239	CASC3	72	52.988	ENSGAFG00000017148	casc3	69	49.231	Gambusia_affinis
ENSOARG00000013239	CASC3	89	77.266	ENSGAGG00000008432	CASC3	94	78.352	Gopherus_agassizii
ENSOARG00000013239	CASC3	100	92.888	ENSGGOG00000005067	CASC3	100	92.888	Gorilla_gorilla
ENSOARG00000013239	CASC3	100	89.758	ENSHGLG00000012117	CASC3	100	89.758	Heterocephalus_glaber_female
ENSOARG00000013239	CASC3	89	89.457	ENSHGLG00100002268	CASC3	99	89.406	Heterocephalus_glaber_male
ENSOARG00000013239	CASC3	100	93.599	ENSSTOG00000006374	CASC3	100	93.599	Ictidomys_tridecemlineatus
ENSOARG00000013239	CASC3	100	89.915	ENSJJAG00000023525	Casc3	100	90.057	Jaculus_jaculus
ENSOARG00000013239	CASC3	64	63.025	ENSKMAG00000019507	casc3	81	49.303	Kryptolebias_marmoratus
ENSOARG00000013239	CASC3	90	60.276	ENSLACG00000013200	CASC3	99	57.851	Latimeria_chalumnae
ENSOARG00000013239	CASC3	77	68.103	ENSLOCG00000013518	casc3	74	65.517	Lepisosteus_oculatus
ENSOARG00000013239	CASC3	100	93.314	ENSLAFG00000000606	CASC3	100	93.314	Loxodonta_africana
ENSOARG00000013239	CASC3	100	94.034	ENSMFAG00000041496	CASC3	100	95.364	Macaca_fascicularis
ENSOARG00000013239	CASC3	100	94.034	ENSMMUG00000045187	CASC3	100	94.034	Macaca_mulatta
ENSOARG00000013239	CASC3	89	93.939	ENSMLEG00000029049	CASC3	98	93.910	Mandrillus_leucophaeus
ENSOARG00000013239	CASC3	75	53.150	ENSMAMG00000005235	casc3	76	52.581	Mastacembelus_armatus
ENSOARG00000013239	CASC3	86	75.493	ENSMGAG00000013247	CASC3	99	74.062	Meleagris_gallopavo
ENSOARG00000013239	CASC3	71	90.600	ENSMAUG00000006023	Casc3	80	90.239	Mesocricetus_auratus
ENSOARG00000013239	CASC3	100	91.477	ENSMICG00000003321	CASC3	100	92.614	Microcebus_murinus
ENSOARG00000013239	CASC3	100	91.323	ENSMOCG00000013644	Casc3	100	90.185	Microtus_ochrogaster
ENSOARG00000013239	CASC3	100	78.156	ENSMODG00000013044	CASC3	92	80.284	Monodelphis_domestica
ENSOARG00000013239	CASC3	100	91.181	MGP_CAROLIEiJ_G0017099	Casc3	100	91.181	Mus_caroli
ENSOARG00000013239	CASC3	100	90.469	ENSMUSG00000078676	Casc3	100	90.469	Mus_musculus
ENSOARG00000013239	CASC3	100	90.469	MGP_SPRETEiJ_G0017943	Casc3	100	90.469	Mus_spretus
ENSOARG00000013239	CASC3	100	95.448	ENSMPUG00000014903	CASC3	100	95.448	Mustela_putorius_furo
ENSOARG00000013239	CASC3	100	92.199	ENSMLUG00000010520	CASC3	100	92.624	Myotis_lucifugus
ENSOARG00000013239	CASC3	100	90.612	ENSNGAG00000023121	Casc3	100	91.038	Nannospalax_galili
ENSOARG00000013239	CASC3	100	92.176	ENSNLEG00000001598	CASC3	100	92.176	Nomascus_leucogenys
ENSOARG00000013239	CASC3	83	93.827	ENSMEUG00000015662	CASC3	97	71.900	Notamacropus_eugenii
ENSOARG00000013239	CASC3	73	89.062	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSOARG00000013239	CASC3	100	88.669	ENSODEG00000017858	CASC3	100	88.952	Octodon_degus
ENSOARG00000013239	CASC3	74	56.508	ENSONIG00000009337	casc3	99	49.509	Oreochromis_niloticus
ENSOARG00000013239	CASC3	64	68.301	ENSOANG00000003499	-	82	68.977	Ornithorhynchus_anatinus
ENSOARG00000013239	CASC3	100	93.457	ENSOCUG00000002954	CASC3	100	93.741	Oryctolagus_cuniculus
ENSOARG00000013239	CASC3	99	93.705	ENSOGAG00000034486	CASC3	99	93.305	Otolemur_garnettii
ENSOARG00000013239	CASC3	100	93.172	ENSPPAG00000035069	CASC3	100	93.172	Pan_paniscus
ENSOARG00000013239	CASC3	100	95.590	ENSPPRG00000023670	CASC3	100	95.590	Panthera_pardus
ENSOARG00000013239	CASC3	91	94.976	ENSPTIG00000010891	CASC3	91	94.976	Panthera_tigris_altaica
ENSOARG00000013239	CASC3	100	93.750	ENSPANG00000021708	CASC3	100	93.750	Papio_anubis
ENSOARG00000013239	CASC3	100	91.892	ENSPEMG00000009774	Casc3	100	92.034	Peromyscus_maniculatus_bairdii
ENSOARG00000013239	CASC3	100	81.844	ENSPCIG00000025678	CASC3	100	83.546	Phascolarctos_cinereus
ENSOARG00000013239	CASC3	90	49.691	ENSPFOG00000017632	casc3	100	46.866	Poecilia_formosa
ENSOARG00000013239	CASC3	75	54.633	ENSPLAG00000005268	casc3	77	53.822	Poecilia_latipinna
ENSOARG00000013239	CASC3	68	46.356	ENSPMEG00000010299	casc3	79	46.000	Poecilia_mexicana
ENSOARG00000013239	CASC3	63	67.857	ENSPREG00000011856	casc3	82	50.628	Poecilia_reticulata
ENSOARG00000013239	CASC3	100	92.461	ENSPPYG00000008467	CASC3	100	93.314	Pongo_abelii
ENSOARG00000013239	CASC3	100	90.625	ENSPCOG00000008183	CASC3	100	91.761	Propithecus_coquereli
ENSOARG00000013239	CASC3	100	95.164	ENSPVAG00000008556	CASC3	100	95.164	Pteropus_vampyrus
ENSOARG00000013239	CASC3	91	94.040	ENSRNOG00000009716	Casc3	100	94.371	Rattus_norvegicus
ENSOARG00000013239	CASC3	100	94.176	ENSRBIG00000033289	CASC3	100	92.898	Rhinopithecus_bieti
ENSOARG00000013239	CASC3	100	94.176	ENSRROG00000022337	CASC3	100	94.176	Rhinopithecus_roxellana
ENSOARG00000013239	CASC3	88	90.939	ENSSBOG00000031406	CASC3	98	92.395	Saimiri_boliviensis_boliviensis
ENSOARG00000013239	CASC3	89	85.191	ENSSHAG00000013338	CASC3	99	85.440	Sarcophilus_harrisii
ENSOARG00000013239	CASC3	74	67.361	ENSSMAG00000016096	casc3	75	53.355	Scophthalmus_maximus
ENSOARG00000013239	CASC3	84	49.390	ENSSDUG00000016893	casc3	75	51.543	Seriola_dumerili
ENSOARG00000013239	CASC3	60	77.586	ENSSLDG00000020308	casc3	77	56.684	Seriola_lalandi_dorsalis
ENSOARG00000013239	CASC3	84	82.323	ENSSARG00000010378	CASC3	99	82.529	Sorex_araneus
ENSOARG00000013239	CASC3	89	95.527	ENSSSCG00000017477	CASC3	98	95.506	Sus_scrofa
ENSOARG00000013239	CASC3	74	75.095	ENSTGUG00000002300	CASC3	99	75.095	Taeniopygia_guttata
ENSOARG00000013239	CASC3	66	98.585	ENSTBEG00000017459	CASC3	67	98.585	Tupaia_belangeri
ENSOARG00000013239	CASC3	86	87.086	ENSTTRG00000016896	CASC3	100	87.086	Tursiops_truncatus
ENSOARG00000013239	CASC3	100	94.460	ENSUAMG00000015116	CASC3	100	94.460	Ursus_americanus
ENSOARG00000013239	CASC3	89	94.728	ENSUMAG00000017697	CASC3	98	94.703	Ursus_maritimus
ENSOARG00000013239	CASC3	75	100.000	ENSVPAG00000000799	CASC3	75	100.000	Vicugna_pacos
ENSOARG00000013239	CASC3	100	96.302	ENSVVUG00000000997	CASC3	100	96.302	Vulpes_vulpes
ENSOARG00000013239	CASC3	89	61.478	ENSXETG00000024395	casc3	98	59.135	Xenopus_tropicalis
ENSOARG00000013239	CASC3	75	53.628	ENSXMAG00000013937	casc3	77	53.398	Xiphophorus_maculatus