EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000013679 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 76440 bases
Position: chr1:121358295-121434734
Accession: 101113560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000014676	Npa1	PF11707.8	2.5e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000014893	URB1-201	6588	XM_004003741	ENSOARP00000014676	2195 (aa)	-	W5PW43

Gene Model

Click here to download ENSOARG00000013679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000013679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000013679	URB1	99	77.844	ENSG00000142207	URB1	97	77.929	Homo_sapiens
ENSOARG00000013679	URB1	96	48.453	ENSAPOG00000020308	urb1	93	48.376	Acanthochromis_polyacanthus
ENSOARG00000013679	URB1	99	79.609	ENSAMEG00000011998	URB1	97	79.864	Ailuropoda_melanoleuca
ENSOARG00000013679	URB1	90	47.760	ENSACIG00000003248	urb1	88	47.760	Amphilophus_citrinellus
ENSOARG00000013679	URB1	98	46.550	ENSAOCG00000010364	urb1	99	38.665	Amphiprion_ocellaris
ENSOARG00000013679	URB1	90	50.777	ENSAPEG00000010758	urb1	94	51.761	Amphiprion_percula
ENSOARG00000013679	URB1	97	47.950	ENSATEG00000011790	urb1	92	47.950	Anabas_testudineus
ENSOARG00000013679	URB1	96	57.341	ENSAPLG00000012791	URB1	96	58.019	Anas_platyrhynchos
ENSOARG00000013679	URB1	99	54.264	ENSACAG00000002817	URB1	95	55.804	Anolis_carolinensis
ENSOARG00000013679	URB1	99	78.014	ENSANAG00000024617	URB1	97	78.014	Aotus_nancymaae
ENSOARG00000013679	URB1	99	47.771	ENSACLG00000024865	urb1	95	48.407	Astatotilapia_calliptera
ENSOARG00000013679	URB1	92	42.450	ENSAMXG00000012306	urb1	88	42.907	Astyanax_mexicanus
ENSOARG00000013679	URB1	99	89.313	ENSBTAG00000012412	URB1	99	89.398	Bos_taurus
ENSOARG00000013679	URB1	99	77.334	ENSCJAG00000009118	URB1	97	77.334	Callithrix_jacchus
ENSOARG00000013679	URB1	99	80.135	ENSCAFG00000008892	URB1	97	80.220	Canis_familiaris
ENSOARG00000013679	URB1	99	79.779	ENSCAFG00020025987	-	99	79.678	Canis_lupus_dingo
ENSOARG00000013679	URB1	99	80.204	ENSCAFG00020025994	-	99	80.289	Canis_lupus_dingo
ENSOARG00000013679	URB1	99	91.942	ENSCHIG00000015645	URB1	97	92.027	Capra_hircus
ENSOARG00000013679	URB1	99	76.251	ENSTSYG00000013286	URB1	97	76.251	Carlito_syrichta
ENSOARG00000013679	URB1	98	71.441	ENSCAPG00000015589	URB1	96	71.441	Cavia_aperea
ENSOARG00000013679	URB1	100	75.085	ENSCPOG00000006748	URB1	97	75.085	Cavia_porcellus
ENSOARG00000013679	URB1	99	78.098	ENSCCAG00000021299	URB1	97	78.098	Cebus_capucinus
ENSOARG00000013679	URB1	99	78.098	ENSCATG00000042630	URB1	97	78.098	Cercocebus_atys
ENSOARG00000013679	URB1	99	75.169	ENSCLAG00000005262	URB1	97	75.339	Chinchilla_lanigera
ENSOARG00000013679	URB1	99	74.916	ENSCSAG00000009584	URB1	97	75.000	Chlorocebus_sabaeus
ENSOARG00000013679	URB1	99	51.526	ENSCPBG00000006454	URB1	99	51.676	Chrysemys_picta_bellii
ENSOARG00000013679	URB1	99	77.759	ENSCANG00000031088	URB1	97	77.844	Colobus_angolensis_palliatus
ENSOARG00000013679	URB1	98	72.641	ENSCGRG00001010616	Urb1	97	72.128	Cricetulus_griseus_chok1gshd
ENSOARG00000013679	URB1	97	72.535	ENSCGRG00000015840	Urb1	96	72.623	Cricetulus_griseus_crigri
ENSOARG00000013679	URB1	97	45.031	ENSCSEG00000012616	urb1	94	45.255	Cynoglossus_semilaevis
ENSOARG00000013679	URB1	80	46.154	ENSCVAG00000009076	urb1	84	52.575	Cyprinodon_variegatus
ENSOARG00000013679	URB1	98	47.152	ENSDARG00000060308	urb1	95	47.282	Danio_rerio
ENSOARG00000013679	URB1	85	74.682	ENSDNOG00000015586	URB1	96	74.682	Dasypus_novemcinctus
ENSOARG00000013679	URB1	99	75.488	ENSDORG00000006735	Urb1	97	75.573	Dipodomys_ordii
ENSOARG00000013679	URB1	91	79.928	ENSETEG00000009080	URB1	87	79.928	Echinops_telfairi
ENSOARG00000013679	URB1	100	79.474	ENSEASG00005007711	URB1	97	79.474	Equus_asinus_asinus
ENSOARG00000013679	URB1	95	89.091	ENSECAG00000013206	URB1	97	89.091	Equus_caballus
ENSOARG00000013679	URB1	58	85.833	ENSEEUG00000003626	-	56	85.833	Erinaceus_europaeus
ENSOARG00000013679	URB1	97	48.025	ENSELUG00000020516	urb1	94	47.972	Esox_lucius
ENSOARG00000013679	URB1	99	79.524	ENSFCAG00000002177	URB1	97	79.694	Felis_catus
ENSOARG00000013679	URB1	98	55.983	ENSFALG00000004636	URB1	96	55.983	Ficedula_albicollis
ENSOARG00000013679	URB1	99	75.696	ENSFDAG00000007288	URB1	92	75.781	Fukomys_damarensis
ENSOARG00000013679	URB1	99	43.497	ENSFHEG00000000202	urb1	96	44.928	Fundulus_heteroclitus
ENSOARG00000013679	URB1	95	45.215	ENSGMOG00000001838	urb1	93	45.431	Gadus_morhua
ENSOARG00000013679	URB1	99	58.143	ENSGALG00000015887	URB1	96	58.398	Gallus_gallus
ENSOARG00000013679	URB1	84	54.566	ENSGAFG00000020694	urb1	89	55.124	Gambusia_affinis
ENSOARG00000013679	URB1	98	47.830	ENSGACG00000011703	urb1	97	47.830	Gasterosteus_aculeatus
ENSOARG00000013679	URB1	99	60.151	ENSGAGG00000022544	URB1	95	60.671	Gopherus_agassizii
ENSOARG00000013679	URB1	99	78.098	ENSGGOG00000000285	URB1	97	78.183	Gorilla_gorilla
ENSOARG00000013679	URB1	99	47.771	ENSHBUG00000001904	urb1	96	48.407	Haplochromis_burtoni
ENSOARG00000013679	URB1	99	72.966	ENSHGLG00000004907	URB1	97	73.048	Heterocephalus_glaber_female
ENSOARG00000013679	URB1	99	74.810	ENSHGLG00100010749	URB1	97	74.895	Heterocephalus_glaber_male
ENSOARG00000013679	URB1	68	47.184	ENSHCOG00000018683	urb1	87	47.961	Hippocampus_comes
ENSOARG00000013679	URB1	98	42.620	ENSIPUG00000014721	urb1	95	43.071	Ictalurus_punctatus
ENSOARG00000013679	URB1	99	77.684	ENSSTOG00000004539	URB1	97	77.768	Ictidomys_tridecemlineatus
ENSOARG00000013679	URB1	97	46.538	ENSKMAG00000006001	urb1	93	47.540	Kryptolebias_marmoratus
ENSOARG00000013679	URB1	90	50.052	ENSLBEG00000027208	urb1	94	50.691	Labrus_bergylta
ENSOARG00000013679	URB1	99	49.216	ENSLACG00000017059	URB1	96	50.084	Latimeria_chalumnae
ENSOARG00000013679	URB1	97	51.363	ENSLOCG00000009190	urb1	95	51.363	Lepisosteus_oculatus
ENSOARG00000013679	URB1	99	75.591	ENSLAFG00000010407	URB1	97	75.507	Loxodonta_africana
ENSOARG00000013679	URB1	99	77.844	ENSMFAG00000034391	URB1	93	77.844	Macaca_fascicularis
ENSOARG00000013679	URB1	99	77.674	ENSMMUG00000010295	URB1	97	77.759	Macaca_mulatta
ENSOARG00000013679	URB1	99	75.318	ENSMNEG00000032981	URB1	97	75.403	Macaca_nemestrina
ENSOARG00000013679	URB1	99	77.929	ENSMLEG00000041435	URB1	97	78.014	Mandrillus_leucophaeus
ENSOARG00000013679	URB1	99	40.851	ENSMAMG00000011238	urb1	98	41.000	Mastacembelus_armatus
ENSOARG00000013679	URB1	99	41.744	ENSMZEG00005011862	urb1	95	43.680	Maylandia_zebra
ENSOARG00000013679	URB1	98	59.019	ENSMGAG00000014512	URB1	96	59.019	Meleagris_gallopavo
ENSOARG00000013679	URB1	93	78.739	ENSMAUG00000010516	Urb1	96	77.713	Mesocricetus_auratus
ENSOARG00000013679	URB1	99	76.805	ENSMICG00000016424	URB1	97	76.466	Microcebus_murinus
ENSOARG00000013679	URB1	99	72.312	ENSMOCG00000012613	Urb1	96	71.973	Microtus_ochrogaster
ENSOARG00000013679	URB1	99	62.913	ENSMODG00000021076	URB1	97	62.913	Monodelphis_domestica
ENSOARG00000013679	URB1	89	51.258	ENSMALG00000017411	urb1	88	51.974	Monopterus_albus
ENSOARG00000013679	URB1	99	72.199	MGP_CAROLIEiJ_G0020948	Urb1	97	72.367	Mus_caroli
ENSOARG00000013679	URB1	99	72.143	ENSMUSG00000039929	Urb1	97	72.143	Mus_musculus
ENSOARG00000013679	URB1	99	71.560	MGP_PahariEiJ_G0016653	Urb1	97	71.560	Mus_pahari
ENSOARG00000013679	URB1	99	71.560	MGP_SPRETEiJ_G0021854	Urb1	97	71.643	Mus_spretus
ENSOARG00000013679	URB1	99	79.014	ENSMPUG00000001123	URB1	97	79.099	Mustela_putorius_furo
ENSOARG00000013679	URB1	99	71.429	ENSNGAG00000001905	Urb1	95	71.713	Nannospalax_galili
ENSOARG00000013679	URB1	81	47.039	ENSNBRG00000001049	urb1	94	47.660	Neolamprologus_brichardi
ENSOARG00000013679	URB1	99	75.912	ENSNLEG00000026872	URB1	97	76.207	Nomascus_leucogenys
ENSOARG00000013679	URB1	95	56.667	ENSMEUG00000010828	URB1	91	56.955	Notamacropus_eugenii
ENSOARG00000013679	URB1	99	70.311	ENSOPRG00000013482	URB1	97	70.059	Ochotona_princeps
ENSOARG00000013679	URB1	99	75.445	ENSODEG00000002587	URB1	97	75.614	Octodon_degus
ENSOARG00000013679	URB1	99	47.833	ENSONIG00000005599	urb1	95	48.231	Oreochromis_niloticus
ENSOARG00000013679	URB1	99	76.071	ENSOCUG00000009381	URB1	97	76.071	Oryctolagus_cuniculus
ENSOARG00000013679	URB1	98	48.742	ENSORLG00000003429	urb1	95	49.075	Oryzias_latipes
ENSOARG00000013679	URB1	99	48.017	ENSORLG00020013785	urb1	99	41.269	Oryzias_latipes_hni
ENSOARG00000013679	URB1	90	45.808	ENSORLG00015019421	urb1	87	46.093	Oryzias_latipes_hsok
ENSOARG00000013679	URB1	74	50.293	ENSOMEG00000002094	urb1	90	50.471	Oryzias_melastigma
ENSOARG00000013679	URB1	99	76.720	ENSOGAG00000017140	URB1	97	76.636	Otolemur_garnettii
ENSOARG00000013679	URB1	99	78.014	ENSPPAG00000003423	URB1	97	78.098	Pan_paniscus
ENSOARG00000013679	URB1	99	79.014	ENSPPRG00000023131	URB1	97	79.099	Panthera_pardus
ENSOARG00000013679	URB1	93	74.765	ENSPTIG00000016125	URB1	94	76.678	Panthera_tigris_altaica
ENSOARG00000013679	URB1	99	77.844	ENSPTRG00000013852	URB1	97	77.929	Pan_troglodytes
ENSOARG00000013679	URB1	99	77.844	ENSPANG00000021964	URB1	97	77.929	Papio_anubis
ENSOARG00000013679	URB1	84	50.309	ENSPKIG00000003683	urb1	92	50.309	Paramormyrops_kingsleyae
ENSOARG00000013679	URB1	99	73.090	ENSPEMG00000021205	Urb1	95	73.090	Peromyscus_maniculatus_bairdii
ENSOARG00000013679	URB1	69	36.686	ENSPMAG00000009733	URB1	87	37.304	Petromyzon_marinus
ENSOARG00000013679	URB1	99	63.091	ENSPCIG00000016350	URB1	97	63.091	Phascolarctos_cinereus
ENSOARG00000013679	URB1	95	47.878	ENSPLAG00000004371	urb1	99	40.611	Poecilia_latipinna
ENSOARG00000013679	URB1	99	47.619	ENSPMEG00000006634	urb1	95	48.017	Poecilia_mexicana
ENSOARG00000013679	URB1	97	47.826	ENSPREG00000013453	urb1	98	41.630	Poecilia_reticulata
ENSOARG00000013679	URB1	99	77.504	ENSPPYG00000011359	URB1	97	77.589	Pongo_abelii
ENSOARG00000013679	URB1	99	65.450	ENSPCAG00000007430	URB1	97	65.450	Procavia_capensis
ENSOARG00000013679	URB1	99	77.740	ENSPCOG00000022695	URB1	97	77.400	Propithecus_coquereli
ENSOARG00000013679	URB1	99	78.287	ENSPVAG00000000889	URB1	97	78.372	Pteropus_vampyrus
ENSOARG00000013679	URB1	99	46.915	ENSPNYG00000010589	urb1	95	47.532	Pundamilia_nyererei
ENSOARG00000013679	URB1	97	43.020	ENSPNAG00000019324	urb1	94	43.082	Pygocentrus_nattereri
ENSOARG00000013679	URB1	99	71.774	ENSRNOG00000002080	Urb1	97	71.774	Rattus_norvegicus
ENSOARG00000013679	URB1	99	77.589	ENSRBIG00000033122	URB1	97	77.674	Rhinopithecus_bieti
ENSOARG00000013679	URB1	99	77.504	ENSRROG00000040237	URB1	97	77.589	Rhinopithecus_roxellana
ENSOARG00000013679	URB1	99	78.069	ENSSBOG00000027672	URB1	97	78.069	Saimiri_boliviensis_boliviensis
ENSOARG00000013679	URB1	99	62.310	ENSSHAG00000005140	URB1	97	62.310	Sarcophilus_harrisii
ENSOARG00000013679	URB1	92	49.038	ENSSFOG00015000339	urb1	94	49.355	Scleropages_formosus
ENSOARG00000013679	URB1	98	47.745	ENSSMAG00000003782	urb1	95	48.351	Scophthalmus_maximus
ENSOARG00000013679	URB1	99	48.170	ENSSDUG00000012313	urb1	94	48.649	Seriola_dumerili
ENSOARG00000013679	URB1	99	47.904	ENSSLDG00000023179	urb1	94	48.379	Seriola_lalandi_dorsalis
ENSOARG00000013679	URB1	99	48.585	ENSSPUG00000012447	URB1	98	49.172	Sphenodon_punctatus
ENSOARG00000013679	URB1	98	47.314	ENSSPAG00000006325	urb1	95	47.719	Stegastes_partitus
ENSOARG00000013679	URB1	99	81.271	ENSSSCG00000032024	URB1	97	81.356	Sus_scrofa
ENSOARG00000013679	URB1	73	56.298	ENSTGUG00000013442	URB1	96	56.298	Taeniopygia_guttata
ENSOARG00000013679	URB1	98	45.746	ENSTRUG00000009372	urb1	94	46.174	Takifugu_rubripes
ENSOARG00000013679	URB1	99	46.062	ENSTNIG00000016277	urb1	97	46.386	Tetraodon_nigroviridis
ENSOARG00000013679	URB1	81	78.841	ENSTBEG00000010044	URB1	79	78.841	Tupaia_belangeri
ENSOARG00000013679	URB1	94	81.959	ENSTTRG00000007712	URB1	92	82.202	Tursiops_truncatus
ENSOARG00000013679	URB1	99	80.204	ENSUAMG00000012231	URB1	96	80.289	Ursus_americanus
ENSOARG00000013679	URB1	85	86.461	ENSUMAG00000017419	URB1	92	86.461	Ursus_maritimus
ENSOARG00000013679	URB1	66	91.667	ENSVPAG00000001164	URB1	65	91.667	Vicugna_pacos
ENSOARG00000013679	URB1	96	84.083	ENSVVUG00000000551	URB1	97	79.729	Vulpes_vulpes
ENSOARG00000013679	URB1	99	52.345	ENSXETG00000009895	urb1	96	53.037	Xenopus_tropicalis
ENSOARG00000013679	URB1	99	38.804	ENSXCOG00000005500	urb1	99	38.945	Xiphophorus_couchianus
ENSOARG00000013679	URB1	99	46.553	ENSXMAG00000007253	urb1	96	46.937	Xiphophorus_maculatus