EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000013682 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: -
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 3371 bases
Position: chr14:13567779-13571149
Accession: 101108854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000014670	RRM_1	PF00076.22	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000014887	PABPN1L-201	909	XM_004015525	ENSOARP00000014670	302 (aa)	-	W5PW37

Gene Model

Click here to download ENSOARG00000013682's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03015	mRNA surveillance pathway	KEGG
oas05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000013682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000013682	PABPN1L	100	64.821	ENSG00000205022	PABPN1L	100	65.472	Homo_sapiens
ENSOARG00000013682	PABPN1L	51	54.140	ENSACIG00000021400	PABPN1L	72	58.519	Amphilophus_citrinellus
ENSOARG00000013682	PABPN1L	67	54.412	ENSACAG00000013250	PABPN1L	99	54.412	Anolis_carolinensis
ENSOARG00000013682	PABPN1L	100	61.184	ENSANAG00000038178	PABPN1L	100	60.656	Aotus_nancymaae
ENSOARG00000013682	PABPN1L	51	54.140	ENSACLG00000025147	PABPN1L	54	56.376	Astatotilapia_calliptera
ENSOARG00000013682	PABPN1L	53	51.235	ENSAMXG00000010873	PABPN1L	63	50.000	Astyanax_mexicanus
ENSOARG00000013682	PABPN1L	100	81.126	ENSBTAG00000023752	-	100	81.126	Bos_taurus
ENSOARG00000013682	PABPN1L	100	61.184	ENSCJAG00000045284	PABPN1L	100	60.328	Callithrix_jacchus
ENSOARG00000013682	PABPN1L	100	78.710	ENSCHIG00000013987	PABPN1L	100	76.452	Capra_hircus
ENSOARG00000013682	PABPN1L	95	63.793	ENSCAPG00000007240	PABPN1L	97	63.345	Cavia_aperea
ENSOARG00000013682	PABPN1L	100	63.366	ENSCPOG00000025951	PABPN1L	100	62.706	Cavia_porcellus
ENSOARG00000013682	PABPN1L	100	62.046	ENSCCAG00000027631	PABPN1L	100	62.046	Cebus_capucinus
ENSOARG00000013682	PABPN1L	100	66.007	ENSCATG00000031060	PABPN1L	100	66.007	Cercocebus_atys
ENSOARG00000013682	PABPN1L	100	64.026	ENSCLAG00000000704	PABPN1L	100	62.046	Chinchilla_lanigera
ENSOARG00000013682	PABPN1L	100	62.382	ENSCSAG00000002881	PABPN1L	100	62.382	Chlorocebus_sabaeus
ENSOARG00000013682	PABPN1L	67	54.589	ENSCPBG00000023441	PABPN1L	61	54.589	Chrysemys_picta_bellii
ENSOARG00000013682	PABPN1L	100	64.356	ENSCANG00000039336	PABPN1L	100	63.158	Colobus_angolensis_palliatus
ENSOARG00000013682	PABPN1L	100	63.607	ENSCGRG00001013211	Pabpn1l	100	62.623	Cricetulus_griseus_chok1gshd
ENSOARG00000013682	PABPN1L	100	63.607	ENSCGRG00000015868	Pabpn1l	100	62.623	Cricetulus_griseus_crigri
ENSOARG00000013682	PABPN1L	100	56.863	ENSDNOG00000034677	PABPN1L	100	57.003	Dasypus_novemcinctus
ENSOARG00000013682	PABPN1L	100	72.185	ENSEASG00005000777	PABPN1L	100	69.205	Equus_asinus_asinus
ENSOARG00000013682	PABPN1L	100	72.517	ENSECAG00000000378	PABPN1L	100	69.536	Equus_caballus
ENSOARG00000013682	PABPN1L	100	57.616	ENSEEUG00000004747	PABPN1L	100	57.285	Erinaceus_europaeus
ENSOARG00000013682	PABPN1L	100	71.617	ENSFCAG00000010465	PABPN1L	100	70.530	Felis_catus
ENSOARG00000013682	PABPN1L	67	56.436	ENSFALG00000003319	PABPN1L	77	54.726	Ficedula_albicollis
ENSOARG00000013682	PABPN1L	100	63.366	ENSFDAG00000021067	PABPN1L	100	61.386	Fukomys_damarensis
ENSOARG00000013682	PABPN1L	62	56.545	ENSGAGG00000010613	PABPN1L	53	58.960	Gopherus_agassizii
ENSOARG00000013682	PABPN1L	100	65.347	ENSGGOG00000012670	PABPN1L	100	65.347	Gorilla_gorilla
ENSOARG00000013682	PABPN1L	51	54.140	ENSHBUG00000002388	PABPN1L	57	51.235	Haplochromis_burtoni
ENSOARG00000013682	PABPN1L	96	63.574	ENSHGLG00000014207	PABPN1L	96	62.857	Heterocephalus_glaber_female
ENSOARG00000013682	PABPN1L	96	63.574	ENSHGLG00100005230	PABPN1L	96	62.857	Heterocephalus_glaber_male
ENSOARG00000013682	PABPN1L	100	63.259	ENSSTOG00000020814	PABPN1L	100	59.936	Ictidomys_tridecemlineatus
ENSOARG00000013682	PABPN1L	100	62.623	ENSJJAG00000006433	Pabpn1l	100	60.000	Jaculus_jaculus
ENSOARG00000013682	PABPN1L	69	68.720	ENSLAFG00000025902	-	80	68.246	Loxodonta_africana
ENSOARG00000013682	PABPN1L	100	65.677	ENSMFAG00000002924	PABPN1L	100	65.677	Macaca_fascicularis
ENSOARG00000013682	PABPN1L	100	64.821	ENSMMUG00000012438	PABPN1L	100	64.803	Macaca_mulatta
ENSOARG00000013682	PABPN1L	100	65.677	ENSMNEG00000044808	PABPN1L	100	65.677	Macaca_nemestrina
ENSOARG00000013682	PABPN1L	100	66.007	ENSMLEG00000032667	PABPN1L	100	66.007	Mandrillus_leucophaeus
ENSOARG00000013682	PABPN1L	51	54.140	ENSMZEG00005002186	PABPN1L	54	56.376	Maylandia_zebra
ENSOARG00000013682	PABPN1L	100	61.056	ENSMAUG00000014032	Pabpn1l	100	60.726	Mesocricetus_auratus
ENSOARG00000013682	PABPN1L	100	68.543	ENSMICG00000028179	PABPN1L	100	67.327	Microcebus_murinus
ENSOARG00000013682	PABPN1L	100	63.399	ENSMOCG00000007955	Pabpn1l	100	62.745	Microtus_ochrogaster
ENSOARG00000013682	PABPN1L	100	46.906	ENSMODG00000003873	-	87	46.097	Monodelphis_domestica
ENSOARG00000013682	PABPN1L	100	61.386	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	60.396	Mus_caroli
ENSOARG00000013682	PABPN1L	100	62.092	ENSMUSG00000069867	Pabpn1l	100	61.111	Mus_musculus
ENSOARG00000013682	PABPN1L	100	62.376	MGP_PahariEiJ_G0023268	Pabpn1l	100	61.056	Mus_pahari
ENSOARG00000013682	PABPN1L	100	61.056	MGP_SPRETEiJ_G0032788	Pabpn1l	100	60.066	Mus_spretus
ENSOARG00000013682	PABPN1L	96	55.743	ENSMLUG00000003228	PABPN1L	84	57.197	Myotis_lucifugus
ENSOARG00000013682	PABPN1L	100	66.337	ENSNGAG00000023992	Pabpn1l	100	64.686	Nannospalax_galili
ENSOARG00000013682	PABPN1L	100	64.145	ENSOPRG00000005597	PABPN1L	100	63.487	Ochotona_princeps
ENSOARG00000013682	PABPN1L	100	62.295	ENSODEG00000004649	PABPN1L	100	60.197	Octodon_degus
ENSOARG00000013682	PABPN1L	100	50.649	ENSOANG00000013901	PABPN1L	100	50.987	Ornithorhynchus_anatinus
ENSOARG00000013682	PABPN1L	64	48.969	ENSORLG00000026560	PABPN1L	57	53.704	Oryzias_latipes
ENSOARG00000013682	PABPN1L	64	48.969	ENSORLG00020015068	PABPN1L	57	53.704	Oryzias_latipes_hni
ENSOARG00000013682	PABPN1L	64	48.969	ENSORLG00015000397	PABPN1L	57	53.704	Oryzias_latipes_hsok
ENSOARG00000013682	PABPN1L	66	49.275	ENSOMEG00000017896	PABPN1L	50	51.667	Oryzias_melastigma
ENSOARG00000013682	PABPN1L	100	68.212	ENSOGAG00000000433	PABPN1L	100	66.887	Otolemur_garnettii
ENSOARG00000013682	PABPN1L	100	64.379	ENSPPAG00000028866	PABPN1L	100	64.379	Pan_paniscus
ENSOARG00000013682	PABPN1L	100	71.947	ENSPPRG00000015106	PABPN1L	100	70.861	Panthera_pardus
ENSOARG00000013682	PABPN1L	94	64.014	ENSPTIG00000015606	PABPN1L	99	62.587	Panthera_tigris_altaica
ENSOARG00000013682	PABPN1L	100	64.379	ENSPTRG00000031120	PABPN1L	100	64.379	Pan_troglodytes
ENSOARG00000013682	PABPN1L	100	65.017	ENSPANG00000026039	PABPN1L	100	65.017	Papio_anubis
ENSOARG00000013682	PABPN1L	67	53.110	ENSPSIG00000003404	PABPN1L	100	53.589	Pelodiscus_sinensis
ENSOARG00000013682	PABPN1L	100	64.026	ENSPEMG00000016624	Pabpn1l	100	63.366	Peromyscus_maniculatus_bairdii
ENSOARG00000013682	PABPN1L	100	63.934	ENSPPYG00000007655	PABPN1L	100	64.706	Pongo_abelii
ENSOARG00000013682	PABPN1L	100	69.307	ENSPCOG00000024077	PABPN1L	100	68.647	Propithecus_coquereli
ENSOARG00000013682	PABPN1L	100	69.836	ENSPVAG00000002716	PABPN1L	100	69.836	Pteropus_vampyrus
ENSOARG00000013682	PABPN1L	51	54.140	ENSPNYG00000004803	PABPN1L	54	56.376	Pundamilia_nyererei
ENSOARG00000013682	PABPN1L	100	62.376	ENSRNOG00000029558	Pabpn1l	100	61.716	Rattus_norvegicus
ENSOARG00000013682	PABPN1L	100	65.686	ENSRBIG00000030740	PABPN1L	100	65.686	Rhinopithecus_bieti
ENSOARG00000013682	PABPN1L	100	65.686	ENSRROG00000032240	-	100	65.686	Rhinopithecus_roxellana
ENSOARG00000013682	PABPN1L	99	64.821	ENSRROG00000035483	-	99	64.803	Rhinopithecus_roxellana
ENSOARG00000013682	PABPN1L	100	62.252	ENSSBOG00000018410	PABPN1L	100	62.252	Saimiri_boliviensis_boliviensis
ENSOARG00000013682	PABPN1L	100	50.804	ENSSHAG00000010001	-	89	50.896	Sarcophilus_harrisii
ENSOARG00000013682	PABPN1L	95	49.301	ENSSARG00000005178	-	96	49.632	Sorex_araneus
ENSOARG00000013682	PABPN1L	66	59.701	ENSSPUG00000007031	PABPN1L	84	57.921	Sphenodon_punctatus
ENSOARG00000013682	PABPN1L	100	74.426	ENSSSCG00000036367	PABPN1L	100	73.115	Sus_scrofa
ENSOARG00000013682	PABPN1L	100	76.490	ENSTTRG00000004691	PABPN1L	100	76.490	Tursiops_truncatus
ENSOARG00000013682	PABPN1L	52	55.346	ENSXETG00000011258	pabpn1l	78	54.598	Xenopus_tropicalis