EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000013695 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 61832 bases
Position: chr22:8256240-8318071
Accession: 101118147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000014688	DND1_DSRM	PF14709.7	8.6e-25	1	1
ENSOARP00000014688	RRM_1	PF00076.22	6.6e-41	1	3
ENSOARP00000014688	RRM_1	PF00076.22	6.6e-41	2	3
ENSOARP00000014688	RRM_1	PF00076.22	6.6e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000014905	A1CF-201	2018	XM_004020007	ENSOARP00000014688	595 (aa)	XP_004020056	W5PW55

Gene Model

Click here to download ENSOARG00000013695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000013695's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000013695	A1CF	75	50.328	ENSOARG00000012711	RBM47	71	50.766
ENSOARG00000013695	A1CF	51	52.427	ENSOARG00000013186	SYNCRIP	51	51.385
ENSOARG00000013695	A1CF	67	71.667	ENSOARG00000016406	RBM46	82	71.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000013695	A1CF	100	95.462	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSOARG00000013695	A1CF	100	73.632	ENSAPOG00000008259	a1cf	100	73.632	Acanthochromis_polyacanthus
ENSOARG00000013695	A1CF	100	94.622	ENSAMEG00000000523	A1CF	100	94.790	Ailuropoda_melanoleuca
ENSOARG00000013695	A1CF	100	76.020	ENSACIG00000008632	a1cf	100	77.162	Amphilophus_citrinellus
ENSOARG00000013695	A1CF	100	74.304	ENSAOCG00000023744	a1cf	96	83.768	Amphiprion_ocellaris
ENSOARG00000013695	A1CF	100	75.286	ENSAPEG00000009537	a1cf	100	76.105	Amphiprion_percula
ENSOARG00000013695	A1CF	100	76.059	ENSATEG00000013720	a1cf	100	76.873	Anabas_testudineus
ENSOARG00000013695	A1CF	100	87.752	ENSAPLG00000002964	A1CF	100	87.752	Anas_platyrhynchos
ENSOARG00000013695	A1CF	100	83.054	ENSACAG00000015269	A1CF	100	82.886	Anolis_carolinensis
ENSOARG00000013695	A1CF	100	94.286	ENSANAG00000019974	A1CF	100	93.950	Aotus_nancymaae
ENSOARG00000013695	A1CF	100	73.366	ENSACLG00000017428	a1cf	100	74.673	Astatotilapia_calliptera
ENSOARG00000013695	A1CF	100	75.041	ENSAMXG00000018180	a1cf	100	75.041	Astyanax_mexicanus
ENSOARG00000013695	A1CF	100	97.479	ENSBTAG00000021195	A1CF	100	97.479	Bos_taurus
ENSOARG00000013695	A1CF	100	95.630	ENSCJAG00000005045	A1CF	100	95.294	Callithrix_jacchus
ENSOARG00000013695	A1CF	100	94.454	ENSCAFG00000015581	A1CF	100	94.454	Canis_familiaris
ENSOARG00000013695	A1CF	100	94.454	ENSCAFG00020026421	A1CF	100	94.454	Canis_lupus_dingo
ENSOARG00000013695	A1CF	100	99.160	ENSCHIG00000020411	A1CF	100	99.160	Capra_hircus
ENSOARG00000013695	A1CF	95	93.794	ENSTSYG00000001755	A1CF	100	93.060	Carlito_syrichta
ENSOARG00000013695	A1CF	100	82.515	ENSCAPG00000017386	A1CF	100	82.515	Cavia_aperea
ENSOARG00000013695	A1CF	100	95.462	ENSCPOG00000009807	A1CF	100	95.294	Cavia_porcellus
ENSOARG00000013695	A1CF	100	95.462	ENSCCAG00000018168	A1CF	100	95.126	Cebus_capucinus
ENSOARG00000013695	A1CF	100	93.277	ENSCATG00000043715	A1CF	100	93.109	Cercocebus_atys
ENSOARG00000013695	A1CF	100	95.134	ENSCLAG00000010424	A1CF	100	95.134	Chinchilla_lanigera
ENSOARG00000013695	A1CF	100	94.958	ENSCSAG00000007032	A1CF	100	94.790	Chlorocebus_sabaeus
ENSOARG00000013695	A1CF	98	89.661	ENSCHOG00000009089	A1CF	98	89.661	Choloepus_hoffmanni
ENSOARG00000013695	A1CF	100	88.423	ENSCPBG00000026464	A1CF	100	88.423	Chrysemys_picta_bellii
ENSOARG00000013695	A1CF	100	95.126	ENSCANG00000038032	A1CF	100	94.958	Colobus_angolensis_palliatus
ENSOARG00000013695	A1CF	100	93.445	ENSCGRG00001017413	A1cf	100	93.445	Cricetulus_griseus_chok1gshd
ENSOARG00000013695	A1CF	100	92.941	ENSCGRG00000017332	A1cf	100	92.941	Cricetulus_griseus_crigri
ENSOARG00000013695	A1CF	100	75.249	ENSCSEG00000002361	a1cf	100	76.412	Cynoglossus_semilaevis
ENSOARG00000013695	A1CF	100	74.919	ENSCVAG00000010520	a1cf	100	76.221	Cyprinodon_variegatus
ENSOARG00000013695	A1CF	100	78.037	ENSDARG00000002968	a1cf	100	79.201	Danio_rerio
ENSOARG00000013695	A1CF	100	93.950	ENSDNOG00000002829	A1CF	100	93.950	Dasypus_novemcinctus
ENSOARG00000013695	A1CF	81	92.754	ENSETEG00000012527	A1CF	81	92.754	Echinops_telfairi
ENSOARG00000013695	A1CF	100	96.985	ENSEASG00005012924	A1CF	100	96.985	Equus_asinus_asinus
ENSOARG00000013695	A1CF	100	96.482	ENSECAG00000010424	A1CF	100	96.482	Equus_caballus
ENSOARG00000013695	A1CF	78	80.942	ENSEEUG00000000013	A1CF	97	82.000	Erinaceus_europaeus
ENSOARG00000013695	A1CF	100	78.369	ENSELUG00000003159	a1cf	100	79.368	Esox_lucius
ENSOARG00000013695	A1CF	100	92.269	ENSFCAG00000011179	A1CF	100	92.605	Felis_catus
ENSOARG00000013695	A1CF	100	85.906	ENSFALG00000013183	A1CF	100	85.906	Ficedula_albicollis
ENSOARG00000013695	A1CF	100	92.605	ENSFDAG00000019371	A1CF	100	92.605	Fukomys_damarensis
ENSOARG00000013695	A1CF	100	70.358	ENSFHEG00000019652	a1cf	96	82.812	Fundulus_heteroclitus
ENSOARG00000013695	A1CF	100	71.452	ENSGMOG00000018943	a1cf	100	71.287	Gadus_morhua
ENSOARG00000013695	A1CF	95	88.319	ENSGALG00000003765	A1CF	97	88.319	Gallus_gallus
ENSOARG00000013695	A1CF	100	70.395	ENSGAFG00000014868	a1cf	100	71.217	Gambusia_affinis
ENSOARG00000013695	A1CF	100	74.671	ENSGACG00000010241	a1cf	100	75.164	Gasterosteus_aculeatus
ENSOARG00000013695	A1CF	94	88.277	ENSGAGG00000016508	A1CF	97	88.277	Gopherus_agassizii
ENSOARG00000013695	A1CF	100	95.294	ENSGGOG00000009670	A1CF	100	95.126	Gorilla_gorilla
ENSOARG00000013695	A1CF	100	75.204	ENSHBUG00000021959	a1cf	100	76.998	Haplochromis_burtoni
ENSOARG00000013695	A1CF	100	94.790	ENSHGLG00000008955	A1CF	100	94.790	Heterocephalus_glaber_female
ENSOARG00000013695	A1CF	100	94.118	ENSHGLG00100000518	A1CF	100	94.118	Heterocephalus_glaber_male
ENSOARG00000013695	A1CF	100	69.870	ENSHCOG00000017669	a1cf	100	73.008	Hippocampus_comes
ENSOARG00000013695	A1CF	89	82.463	ENSIPUG00000010367	a1cf	95	82.739	Ictalurus_punctatus
ENSOARG00000013695	A1CF	100	77.724	ENSKMAG00000006568	a1cf	100	78.374	Kryptolebias_marmoratus
ENSOARG00000013695	A1CF	99	75.530	ENSLBEG00000020994	a1cf	98	77.011	Labrus_bergylta
ENSOARG00000013695	A1CF	100	80.634	ENSLACG00000008061	A1CF	100	80.634	Latimeria_chalumnae
ENSOARG00000013695	A1CF	100	82.333	ENSLOCG00000006302	a1cf	100	82.333	Lepisosteus_oculatus
ENSOARG00000013695	A1CF	100	93.613	ENSLAFG00000015462	A1CF	100	93.613	Loxodonta_africana
ENSOARG00000013695	A1CF	100	93.613	ENSMFAG00000035948	A1CF	100	93.445	Macaca_fascicularis
ENSOARG00000013695	A1CF	100	93.613	ENSMMUG00000007077	A1CF	100	93.445	Macaca_mulatta
ENSOARG00000013695	A1CF	100	93.277	ENSMNEG00000031454	A1CF	100	93.109	Macaca_nemestrina
ENSOARG00000013695	A1CF	100	94.622	ENSMLEG00000037223	A1CF	100	94.454	Mandrillus_leucophaeus
ENSOARG00000013695	A1CF	100	73.486	ENSMAMG00000010402	a1cf	100	75.941	Mastacembelus_armatus
ENSOARG00000013695	A1CF	100	76.000	ENSMZEG00005013245	a1cf	100	77.000	Maylandia_zebra
ENSOARG00000013695	A1CF	100	88.442	ENSMGAG00000001507	A1CF	100	88.442	Meleagris_gallopavo
ENSOARG00000013695	A1CF	100	93.109	ENSMAUG00000007422	A1cf	100	93.109	Mesocricetus_auratus
ENSOARG00000013695	A1CF	100	92.642	ENSMICG00000003377	A1CF	100	92.809	Microcebus_murinus
ENSOARG00000013695	A1CF	100	92.773	ENSMOCG00000021536	A1cf	100	92.773	Microtus_ochrogaster
ENSOARG00000013695	A1CF	100	67.921	ENSMMOG00000009422	a1cf	100	69.394	Mola_mola
ENSOARG00000013695	A1CF	92	89.031	ENSMODG00000016478	A1CF	97	89.981	Monodelphis_domestica
ENSOARG00000013695	A1CF	100	72.333	ENSMALG00000012992	a1cf	100	72.000	Monopterus_albus
ENSOARG00000013695	A1CF	100	92.101	MGP_CAROLIEiJ_G0022873	A1cf	100	92.101	Mus_caroli
ENSOARG00000013695	A1CF	100	92.101	ENSMUSG00000052595	A1cf	99	95.000	Mus_musculus
ENSOARG00000013695	A1CF	100	91.429	MGP_PahariEiJ_G0014366	A1cf	100	91.429	Mus_pahari
ENSOARG00000013695	A1CF	100	91.933	MGP_SPRETEiJ_G0023792	A1cf	100	91.933	Mus_spretus
ENSOARG00000013695	A1CF	100	88.571	ENSMPUG00000016971	A1CF	100	88.571	Mustela_putorius_furo
ENSOARG00000013695	A1CF	100	94.958	ENSMLUG00000016071	A1CF	100	94.958	Myotis_lucifugus
ENSOARG00000013695	A1CF	100	93.613	ENSNGAG00000015136	A1cf	100	93.613	Nannospalax_galili
ENSOARG00000013695	A1CF	100	75.530	ENSNBRG00000001712	a1cf	100	77.325	Neolamprologus_brichardi
ENSOARG00000013695	A1CF	100	95.966	ENSNLEG00000012028	A1CF	100	95.966	Nomascus_leucogenys
ENSOARG00000013695	A1CF	94	88.455	ENSMEUG00000015909	A1CF	100	88.455	Notamacropus_eugenii
ENSOARG00000013695	A1CF	88	84.190	ENSOPRG00000010667	A1CF	97	84.280	Ochotona_princeps
ENSOARG00000013695	A1CF	100	75.856	ENSONIG00000019105	a1cf	100	76.835	Oreochromis_niloticus
ENSOARG00000013695	A1CF	78	87.794	ENSOANG00000007360	A1CF	99	87.794	Ornithorhynchus_anatinus
ENSOARG00000013695	A1CF	100	91.611	ENSOCUG00000011587	A1CF	100	91.946	Oryctolagus_cuniculus
ENSOARG00000013695	A1CF	100	74.346	ENSORLG00000013342	a1cf	100	74.510	Oryzias_latipes
ENSOARG00000013695	A1CF	100	75.856	ENSORLG00020000586	a1cf	100	76.346	Oryzias_latipes_hni
ENSOARG00000013695	A1CF	100	75.693	ENSORLG00015018569	a1cf	100	76.183	Oryzias_latipes_hsok
ENSOARG00000013695	A1CF	100	75.286	ENSOMEG00000013531	a1cf	100	75.123	Oryzias_melastigma
ENSOARG00000013695	A1CF	100	93.277	ENSOGAG00000012884	A1CF	100	93.445	Otolemur_garnettii
ENSOARG00000013695	A1CF	97	93.241	ENSPPAG00000028115	A1CF	100	97.166	Pan_paniscus
ENSOARG00000013695	A1CF	100	93.950	ENSPPRG00000012180	A1CF	100	94.286	Panthera_pardus
ENSOARG00000013695	A1CF	100	93.950	ENSPTIG00000021223	A1CF	100	94.286	Panthera_tigris_altaica
ENSOARG00000013695	A1CF	100	95.126	ENSPTRG00000002508	A1CF	100	94.958	Pan_troglodytes
ENSOARG00000013695	A1CF	100	93.613	ENSPANG00000021988	A1CF	100	93.445	Papio_anubis
ENSOARG00000013695	A1CF	100	80.699	ENSPKIG00000025176	a1cf	100	80.532	Paramormyrops_kingsleyae
ENSOARG00000013695	A1CF	100	86.745	ENSPSIG00000010318	A1CF	100	86.745	Pelodiscus_sinensis
ENSOARG00000013695	A1CF	98	65.306	ENSPMGG00000013359	a1cf	99	66.724	Periophthalmus_magnuspinnatus
ENSOARG00000013695	A1CF	100	92.941	ENSPEMG00000015021	A1cf	100	92.941	Peromyscus_maniculatus_bairdii
ENSOARG00000013695	A1CF	100	88.087	ENSPCIG00000002175	A1CF	100	88.087	Phascolarctos_cinereus
ENSOARG00000013695	A1CF	100	76.710	ENSPFOG00000006683	a1cf	100	77.850	Poecilia_formosa
ENSOARG00000013695	A1CF	100	76.547	ENSPFOG00000007437	-	100	77.687	Poecilia_formosa
ENSOARG00000013695	A1CF	100	75.407	ENSPLAG00000000026	a1cf	100	76.547	Poecilia_latipinna
ENSOARG00000013695	A1CF	100	75.407	ENSPLAG00000001210	-	100	76.547	Poecilia_latipinna
ENSOARG00000013695	A1CF	100	68.301	ENSPMEG00000000921	a1cf	100	69.444	Poecilia_mexicana
ENSOARG00000013695	A1CF	100	69.444	ENSPMEG00000015529	-	100	70.588	Poecilia_mexicana
ENSOARG00000013695	A1CF	100	76.384	ENSPREG00000016298	a1cf	100	77.687	Poecilia_reticulata
ENSOARG00000013695	A1CF	100	94.454	ENSPPYG00000002819	A1CF	100	94.454	Pongo_abelii
ENSOARG00000013695	A1CF	79	72.939	ENSPCAG00000006463	A1CF	70	89.796	Procavia_capensis
ENSOARG00000013695	A1CF	100	94.966	ENSPCOG00000024172	A1CF	100	94.966	Propithecus_coquereli
ENSOARG00000013695	A1CF	100	76.509	ENSPNYG00000017944	a1cf	100	78.303	Pundamilia_nyererei
ENSOARG00000013695	A1CF	100	80.132	ENSPNAG00000007704	a1cf	100	79.967	Pygocentrus_nattereri
ENSOARG00000013695	A1CF	100	90.924	ENSRNOG00000033195	A1cf	100	90.924	Rattus_norvegicus
ENSOARG00000013695	A1CF	100	88.275	ENSRBIG00000042892	A1CF	100	91.194	Rhinopithecus_bieti
ENSOARG00000013695	A1CF	100	94.958	ENSRROG00000041398	A1CF	100	94.790	Rhinopithecus_roxellana
ENSOARG00000013695	A1CF	100	95.798	ENSSBOG00000021930	A1CF	100	95.798	Saimiri_boliviensis_boliviensis
ENSOARG00000013695	A1CF	100	89.765	ENSSHAG00000005096	A1CF	100	89.765	Sarcophilus_harrisii
ENSOARG00000013695	A1CF	100	79.436	ENSSFOG00015011774	a1cf	100	79.768	Scleropages_formosus
ENSOARG00000013695	A1CF	100	75.896	ENSSMAG00000013271	a1cf	100	76.059	Scophthalmus_maximus
ENSOARG00000013695	A1CF	100	76.451	ENSSDUG00000013930	a1cf	100	77.114	Seriola_dumerili
ENSOARG00000013695	A1CF	100	70.462	ENSSLDG00000004290	a1cf	100	69.967	Seriola_lalandi_dorsalis
ENSOARG00000013695	A1CF	95	83.569	ENSSARG00000005940	A1CF	96	83.569	Sorex_araneus
ENSOARG00000013695	A1CF	95	86.292	ENSSPUG00000006797	A1CF	95	86.292	Sphenodon_punctatus
ENSOARG00000013695	A1CF	100	96.975	ENSSSCG00000010431	A1CF	100	96.975	Sus_scrofa
ENSOARG00000013695	A1CF	100	87.625	ENSTGUG00000005090	A1CF	100	87.291	Taeniopygia_guttata
ENSOARG00000013695	A1CF	100	75.367	ENSTRUG00000001982	a1cf	100	75.204	Takifugu_rubripes
ENSOARG00000013695	A1CF	100	75.610	ENSTNIG00000003580	a1cf	100	75.285	Tetraodon_nigroviridis
ENSOARG00000013695	A1CF	97	88.562	ENSTTRG00000013190	A1CF	95	88.562	Tursiops_truncatus
ENSOARG00000013695	A1CF	100	93.613	ENSUAMG00000020065	A1CF	100	93.445	Ursus_americanus
ENSOARG00000013695	A1CF	100	94.454	ENSUMAG00000011162	A1CF	100	94.454	Ursus_maritimus
ENSOARG00000013695	A1CF	87	89.635	ENSVPAG00000006130	A1CF	86	89.635	Vicugna_pacos
ENSOARG00000013695	A1CF	100	93.109	ENSVVUG00000002504	A1CF	100	92.941	Vulpes_vulpes
ENSOARG00000013695	A1CF	100	77.667	ENSXETG00000006611	a1cf	100	77.500	Xenopus_tropicalis
ENSOARG00000013695	A1CF	100	76.885	ENSXCOG00000003302	a1cf	100	77.541	Xiphophorus_couchianus
ENSOARG00000013695	A1CF	100	78.033	ENSXMAG00000016703	a1cf	100	78.689	Xiphophorus_maculatus