EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000013949 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 30834 bases
Position: chr3:103979150-104009983
Accession: 101113316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000014982	ResIII	PF04851.15	1.2e-25	1	2
ENSOARP00000014982	ResIII	PF04851.15	1.2e-25	2	2
ENSOARP00000014982	DEAD	PF00270.29	2e-52	1	2
ENSOARP00000014982	DEAD	PF00270.29	2e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000015202	SNRNP200-201	6460	XM_004006166	ENSOARP00000014982	2124 (aa)	XP_014950005	W5PWZ8

Gene Model

Click here to download ENSOARG00000013949's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000013949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000013949	SNRNP200	75	31.013	ENSOARG00000015812	HFM1	58	31.013
ENSOARG00000013949	SNRNP200	80	47.341	ENSOARG00000011627	ASCC3	77	47.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000013949	SNRNP200	100	98.456	ENSG00000144028	SNRNP200	100	98.456	Homo_sapiens
ENSOARG00000013949	SNRNP200	99	89.953	ENSAPOG00000010223	snrnp200	99	89.846	Acanthochromis_polyacanthus
ENSOARG00000013949	SNRNP200	100	98.503	ENSAMEG00000008996	SNRNP200	100	98.503	Ailuropoda_melanoleuca
ENSOARG00000013949	SNRNP200	97	89.834	ENSACIG00000001764	snrnp200	98	89.834	Amphilophus_citrinellus
ENSOARG00000013949	SNRNP200	99	89.906	ENSAOCG00000024593	snrnp200	100	89.513	Amphiprion_ocellaris
ENSOARG00000013949	SNRNP200	97	89.567	ENSAPEG00000012554	snrnp200	100	89.567	Amphiprion_percula
ENSOARG00000013949	SNRNP200	99	89.812	ENSATEG00000022522	snrnp200	99	89.705	Anabas_testudineus
ENSOARG00000013949	SNRNP200	99	96.466	ENSAPLG00000004313	SNRNP200	100	96.466	Anas_platyrhynchos
ENSOARG00000013949	SNRNP200	99	97.033	ENSACAG00000000434	SNRNP200	100	97.033	Anolis_carolinensis
ENSOARG00000013949	SNRNP200	100	93.937	ENSANAG00000036625	SNRNP200	100	94.356	Aotus_nancymaae
ENSOARG00000013949	SNRNP200	99	89.671	ENSACLG00000011188	snrnp200	99	89.565	Astatotilapia_calliptera
ENSOARG00000013949	SNRNP200	99	89.859	ENSAMXG00000005684	snrnp200	99	89.752	Astyanax_mexicanus
ENSOARG00000013949	SNRNP200	100	98.596	ENSBTAG00000000848	SNRNP200	100	98.596	Bos_taurus
ENSOARG00000013949	SNRNP200	100	98.409	ENSCJAG00000007514	SNRNP200	100	99.088	Callithrix_jacchus
ENSOARG00000013949	SNRNP200	100	97.715	ENSCAFG00020019979	SNRNP200	100	99.088	Canis_lupus_dingo
ENSOARG00000013949	SNRNP200	100	98.877	ENSCHIG00000020611	SNRNP200	100	98.877	Capra_hircus
ENSOARG00000013949	SNRNP200	100	98.456	ENSTSYG00000010467	SNRNP200	100	99.088	Carlito_syrichta
ENSOARG00000013949	SNRNP200	99	98.119	ENSCAPG00000017234	SNRNP200	99	98.119	Cavia_aperea
ENSOARG00000013949	SNRNP200	100	98.362	ENSCPOG00000006776	SNRNP200	100	98.362	Cavia_porcellus
ENSOARG00000013949	SNRNP200	100	98.409	ENSCCAG00000033962	SNRNP200	100	99.088	Cebus_capucinus
ENSOARG00000013949	SNRNP200	100	98.456	ENSCATG00000015790	SNRNP200	100	99.088	Cercocebus_atys
ENSOARG00000013949	SNRNP200	100	98.315	ENSCLAG00000004116	SNRNP200	100	98.315	Chinchilla_lanigera
ENSOARG00000013949	SNRNP200	100	98.409	ENSCSAG00000017369	SNRNP200	100	98.409	Chlorocebus_sabaeus
ENSOARG00000013949	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSOARG00000013949	SNRNP200	100	96.544	ENSCPBG00000022571	SNRNP200	99	97.872	Chrysemys_picta_bellii
ENSOARG00000013949	SNRNP200	99	75.724	ENSCING00000005082	-	99	75.864	Ciona_intestinalis
ENSOARG00000013949	SNRNP200	100	92.994	ENSCANG00000033932	SNRNP200	100	98.308	Colobus_angolensis_palliatus
ENSOARG00000013949	SNRNP200	100	98.409	ENSCGRG00001022610	Snrnp200	100	98.409	Cricetulus_griseus_chok1gshd
ENSOARG00000013949	SNRNP200	100	97.850	ENSCGRG00000016472	Snrnp200	100	97.850	Cricetulus_griseus_crigri
ENSOARG00000013949	SNRNP200	100	89.003	ENSCSEG00000016399	snrnp200	100	89.003	Cynoglossus_semilaevis
ENSOARG00000013949	SNRNP200	100	84.792	ENSCVAG00000017631	snrnp200	99	84.792	Cyprinodon_variegatus
ENSOARG00000013949	SNRNP200	100	89.378	ENSDARG00000077536	snrnp200	99	89.378	Danio_rerio
ENSOARG00000013949	SNRNP200	100	97.099	ENSDNOG00000011227	SNRNP200	100	97.099	Dasypus_novemcinctus
ENSOARG00000013949	SNRNP200	100	95.792	ENSDORG00000005861	Snrnp200	100	95.792	Dipodomys_ordii
ENSOARG00000013949	SNRNP200	100	73.476	FBgn0263599	l(3)72Ab	99	73.383	Drosophila_melanogaster
ENSOARG00000013949	SNRNP200	95	99.569	ENSETEG00000000162	SNRNP200	74	99.569	Echinops_telfairi
ENSOARG00000013949	SNRNP200	83	80.735	ENSEBUG00000016524	snrnp200	95	80.735	Eptatretus_burgeri
ENSOARG00000013949	SNRNP200	100	97.390	ENSEASG00005001884	SNRNP200	100	97.390	Equus_asinus_asinus
ENSOARG00000013949	SNRNP200	100	98.503	ENSECAG00000019675	SNRNP200	99	99.765	Equus_caballus
ENSOARG00000013949	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSOARG00000013949	SNRNP200	99	89.812	ENSELUG00000018948	snrnp200	99	89.705	Esox_lucius
ENSOARG00000013949	SNRNP200	100	98.549	ENSFCAG00000010699	SNRNP200	100	98.549	Felis_catus
ENSOARG00000013949	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSOARG00000013949	SNRNP200	100	98.409	ENSFDAG00000004683	SNRNP200	100	98.409	Fukomys_damarensis
ENSOARG00000013949	SNRNP200	100	86.898	ENSFHEG00000003786	snrnp200	99	86.898	Fundulus_heteroclitus
ENSOARG00000013949	SNRNP200	100	88.650	ENSGMOG00000004881	snrnp200	99	88.603	Gadus_morhua
ENSOARG00000013949	SNRNP200	100	87.085	ENSGAFG00000010807	snrnp200	99	87.085	Gambusia_affinis
ENSOARG00000013949	SNRNP200	100	89.029	ENSGACG00000011474	snrnp200	99	88.936	Gasterosteus_aculeatus
ENSOARG00000013949	SNRNP200	95	96.351	ENSGAGG00000016069	SNRNP200	99	96.351	Gopherus_agassizii
ENSOARG00000013949	SNRNP200	100	98.456	ENSGGOG00000005174	SNRNP200	100	99.088	Gorilla_gorilla
ENSOARG00000013949	SNRNP200	97	87.413	ENSHBUG00000011322	snrnp200	99	87.460	Haplochromis_burtoni
ENSOARG00000013949	SNRNP200	100	98.456	ENSHGLG00000006654	SNRNP200	100	98.456	Heterocephalus_glaber_female
ENSOARG00000013949	SNRNP200	100	98.456	ENSHGLG00100018594	SNRNP200	100	98.456	Heterocephalus_glaber_male
ENSOARG00000013949	SNRNP200	100	98.409	ENSSTOG00000016351	SNRNP200	100	98.409	Ictidomys_tridecemlineatus
ENSOARG00000013949	SNRNP200	100	98.315	ENSJJAG00000023659	Snrnp200	100	98.315	Jaculus_jaculus
ENSOARG00000013949	SNRNP200	100	86.707	ENSKMAG00000003665	snrnp200	99	86.707	Kryptolebias_marmoratus
ENSOARG00000013949	SNRNP200	100	89.424	ENSLBEG00000021585	snrnp200	99	89.424	Labrus_bergylta
ENSOARG00000013949	SNRNP200	82	92.800	ENSLACG00000000226	SNRNP200	99	93.234	Latimeria_chalumnae
ENSOARG00000013949	SNRNP200	100	91.156	ENSLOCG00000015198	snrnp200	99	91.156	Lepisosteus_oculatus
ENSOARG00000013949	SNRNP200	100	98.222	ENSLAFG00000015626	SNRNP200	100	98.222	Loxodonta_africana
ENSOARG00000013949	SNRNP200	100	98.409	ENSMFAG00000040174	SNRNP200	100	99.088	Macaca_fascicularis
ENSOARG00000013949	SNRNP200	100	98.409	ENSMMUG00000023261	SNRNP200	100	99.088	Macaca_mulatta
ENSOARG00000013949	SNRNP200	100	98.362	ENSMNEG00000032398	SNRNP200	100	98.936	Macaca_nemestrina
ENSOARG00000013949	SNRNP200	100	98.456	ENSMLEG00000019083	SNRNP200	100	99.088	Mandrillus_leucophaeus
ENSOARG00000013949	SNRNP200	100	89.336	ENSMAMG00000007851	snrnp200	99	89.289	Mastacembelus_armatus
ENSOARG00000013949	SNRNP200	97	87.413	ENSMZEG00005010787	snrnp200	99	87.460	Maylandia_zebra
ENSOARG00000013949	SNRNP200	97	95.986	ENSMGAG00000001831	SNRNP200	100	95.986	Meleagris_gallopavo
ENSOARG00000013949	SNRNP200	100	98.362	ENSMAUG00000011825	Snrnp200	100	98.362	Mesocricetus_auratus
ENSOARG00000013949	SNRNP200	100	98.409	ENSMICG00000004710	SNRNP200	100	98.784	Microcebus_murinus
ENSOARG00000013949	SNRNP200	100	95.788	ENSMOCG00000011814	Snrnp200	100	95.788	Microtus_ochrogaster
ENSOARG00000013949	SNRNP200	99	88.075	ENSMMOG00000014167	snrnp200	99	87.974	Mola_mola
ENSOARG00000013949	SNRNP200	100	97.660	ENSMODG00000008475	SNRNP200	100	97.660	Monodelphis_domestica
ENSOARG00000013949	SNRNP200	99	89.906	ENSMALG00000001973	snrnp200	99	89.799	Monopterus_albus
ENSOARG00000013949	SNRNP200	100	98.175	MGP_CAROLIEiJ_G0024250	Snrnp200	100	98.175	Mus_caroli
ENSOARG00000013949	SNRNP200	100	98.222	ENSMUSG00000003660	Snrnp200	100	98.222	Mus_musculus
ENSOARG00000013949	SNRNP200	100	98.269	MGP_PahariEiJ_G0025695	Snrnp200	100	98.269	Mus_pahari
ENSOARG00000013949	SNRNP200	100	98.222	MGP_SPRETEiJ_G0025170	Snrnp200	100	98.222	Mus_spretus
ENSOARG00000013949	SNRNP200	100	98.456	ENSMPUG00000008949	SNRNP200	100	98.456	Mustela_putorius_furo
ENSOARG00000013949	SNRNP200	100	97.944	ENSMLUG00000010493	SNRNP200	100	97.944	Myotis_lucifugus
ENSOARG00000013949	SNRNP200	100	94.338	ENSMLUG00000027511	-	100	94.338	Myotis_lucifugus
ENSOARG00000013949	SNRNP200	100	98.456	ENSNGAG00000021993	Snrnp200	100	98.456	Nannospalax_galili
ENSOARG00000013949	SNRNP200	90	89.919	ENSNBRG00000017960	snrnp200	98	89.919	Neolamprologus_brichardi
ENSOARG00000013949	SNRNP200	100	93.634	ENSNLEG00000000025	SNRNP200	100	95.441	Nomascus_leucogenys
ENSOARG00000013949	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	78	100.000	Notamacropus_eugenii
ENSOARG00000013949	SNRNP200	100	94.572	ENSOPRG00000015464	SNRNP200	100	94.572	Ochotona_princeps
ENSOARG00000013949	SNRNP200	100	98.315	ENSODEG00000008366	SNRNP200	100	98.315	Octodon_degus
ENSOARG00000013949	SNRNP200	99	89.671	ENSONIG00000010714	snrnp200	99	89.565	Oreochromis_niloticus
ENSOARG00000013949	SNRNP200	100	98.362	ENSOCUG00000009864	SNRNP200	100	98.362	Oryctolagus_cuniculus
ENSOARG00000013949	SNRNP200	100	89.284	ENSORLG00000012286	snrnp200	100	89.284	Oryzias_latipes
ENSOARG00000013949	SNRNP200	100	89.331	ENSORLG00020004648	snrnp200	100	89.331	Oryzias_latipes_hni
ENSOARG00000013949	SNRNP200	100	89.284	ENSORLG00015019114	snrnp200	100	89.284	Oryzias_latipes_hsok
ENSOARG00000013949	SNRNP200	99	89.531	ENSOMEG00000011834	snrnp200	99	89.424	Oryzias_melastigma
ENSOARG00000013949	SNRNP200	100	98.456	ENSOGAG00000006879	SNRNP200	100	98.456	Otolemur_garnettii
ENSOARG00000013949	SNRNP200	100	98.456	ENSPPAG00000041559	SNRNP200	100	99.088	Pan_paniscus
ENSOARG00000013949	SNRNP200	100	98.549	ENSPPRG00000004435	SNRNP200	100	98.549	Panthera_pardus
ENSOARG00000013949	SNRNP200	100	98.081	ENSPTIG00000006380	SNRNP200	100	98.081	Panthera_tigris_altaica
ENSOARG00000013949	SNRNP200	100	98.456	ENSPTRG00000012230	SNRNP200	100	99.088	Pan_troglodytes
ENSOARG00000013949	SNRNP200	100	98.503	ENSPANG00000006017	SNRNP200	100	99.088	Papio_anubis
ENSOARG00000013949	SNRNP200	100	90.080	ENSPKIG00000014762	snrnp200	99	90.080	Paramormyrops_kingsleyae
ENSOARG00000013949	SNRNP200	100	95.557	ENSPSIG00000008580	SNRNP200	100	95.557	Pelodiscus_sinensis
ENSOARG00000013949	SNRNP200	100	97.660	ENSPCIG00000023050	SNRNP200	100	97.660	Phascolarctos_cinereus
ENSOARG00000013949	SNRNP200	100	89.429	ENSPFOG00000015110	snrnp200	99	89.429	Poecilia_formosa
ENSOARG00000013949	SNRNP200	97	89.676	ENSPLAG00000006711	snrnp200	99	89.676	Poecilia_latipinna
ENSOARG00000013949	SNRNP200	97	89.621	ENSPMEG00000021166	snrnp200	99	89.621	Poecilia_mexicana
ENSOARG00000013949	SNRNP200	100	89.518	ENSPREG00000008875	snrnp200	99	89.518	Poecilia_reticulata
ENSOARG00000013949	SNRNP200	100	98.456	ENSPPYG00000012068	SNRNP200	100	98.456	Pongo_abelii
ENSOARG00000013949	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSOARG00000013949	SNRNP200	100	98.456	ENSPCOG00000024608	SNRNP200	100	98.936	Propithecus_coquereli
ENSOARG00000013949	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSOARG00000013949	SNRNP200	99	85.159	ENSPNYG00000017476	snrnp200	99	85.068	Pundamilia_nyererei
ENSOARG00000013949	SNRNP200	100	85.166	ENSPNAG00000010998	snrnp200	99	85.166	Pygocentrus_nattereri
ENSOARG00000013949	SNRNP200	100	98.362	ENSRNOG00000012157	Snrnp200	100	98.362	Rattus_norvegicus
ENSOARG00000013949	SNRNP200	100	98.456	ENSRBIG00000044690	-	100	99.088	Rhinopithecus_bieti
ENSOARG00000013949	SNRNP200	100	98.456	ENSRROG00000037952	-	100	99.088	Rhinopithecus_roxellana
ENSOARG00000013949	SNRNP200	100	98.409	ENSSBOG00000035471	SNRNP200	100	99.088	Saimiri_boliviensis_boliviensis
ENSOARG00000013949	SNRNP200	97	97.534	ENSSHAG00000000758	SNRNP200	100	97.534	Sarcophilus_harrisii
ENSOARG00000013949	SNRNP200	99	90.516	ENSSFOG00015018826	snrnp200	99	90.407	Scleropages_formosus
ENSOARG00000013949	SNRNP200	99	89.624	ENSSMAG00000005463	snrnp200	99	89.781	Scophthalmus_maximus
ENSOARG00000013949	SNRNP200	99	89.812	ENSSDUG00000021410	snrnp200	99	89.705	Seriola_dumerili
ENSOARG00000013949	SNRNP200	99	89.765	ENSSLDG00000010884	snrnp200	99	89.658	Seriola_lalandi_dorsalis
ENSOARG00000013949	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSOARG00000013949	SNRNP200	100	96.350	ENSSPUG00000003726	-	100	96.350	Sphenodon_punctatus
ENSOARG00000013949	SNRNP200	99	89.859	ENSSPAG00000001842	snrnp200	99	89.752	Stegastes_partitus
ENSOARG00000013949	SNRNP200	100	98.362	ENSSSCG00000008127	SNRNP200	100	98.362	Sus_scrofa
ENSOARG00000013949	SNRNP200	99	87.308	ENSTGUG00000014475	-	100	87.308	Taeniopygia_guttata
ENSOARG00000013949	SNRNP200	99	89.577	ENSTRUG00000001307	snrnp200	99	89.471	Takifugu_rubripes
ENSOARG00000013949	SNRNP200	100	85.332	ENSTNIG00000004320	snrnp200	100	85.332	Tetraodon_nigroviridis
ENSOARG00000013949	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSOARG00000013949	SNRNP200	100	98.175	ENSTTRG00000004983	SNRNP200	100	98.175	Tursiops_truncatus
ENSOARG00000013949	SNRNP200	75	92.829	ENSUAMG00000008395	-	95	92.829	Ursus_americanus
ENSOARG00000013949	SNRNP200	100	98.549	ENSUMAG00000012385	SNRNP200	100	98.549	Ursus_maritimus
ENSOARG00000013949	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSOARG00000013949	SNRNP200	100	98.321	ENSVVUG00000026247	SNRNP200	100	99.088	Vulpes_vulpes
ENSOARG00000013949	SNRNP200	100	93.364	ENSXETG00000001243	snrnp200	100	93.364	Xenopus_tropicalis
ENSOARG00000013949	SNRNP200	97	89.941	ENSXMAG00000002058	snrnp200	98	89.941	Xiphophorus_maculatus