EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000014163 (Gene tree)
Gene ID: 101119830
Gene Symbol: PSPC1
Alias: -
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 48807 bases
Position: chr10:36464910-36513716
Accession: 101119830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000015207	RRM_1	PF00076.22	1.9e-32	1	2
ENSOARP00000015207	RRM_1	PF00076.22	1.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000015428	PSPC1-201	1458	XM_004012171	ENSOARP00000015207	485 (aa)	XP_004012220	W5PXM3

Gene Model

Click here to download ENSOARG00000014163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000014163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000014163	PSPC1	95	58.635	ENSOARG00000019439	SFPQ	54	66.852
ENSOARG00000014163	PSPC1	95	57.516	ENSOARG00000016966	NONO	76	68.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000014163	PSPC1	100	91.048	ENSG00000121390	PSPC1	100	91.048	Homo_sapiens
ENSOARG00000014163	PSPC1	95	70.105	ENSAPOG00000015946	pspc1	87	68.632	Acanthochromis_polyacanthus
ENSOARG00000014163	PSPC1	100	91.587	ENSAMEG00000017420	PSPC1	100	91.587	Ailuropoda_melanoleuca
ENSOARG00000014163	PSPC1	95	61.834	ENSACIG00000018695	pspc1	86	59.062	Amphilophus_citrinellus
ENSOARG00000014163	PSPC1	95	69.182	ENSAOCG00000005279	pspc1	87	68.288	Amphiprion_ocellaris
ENSOARG00000014163	PSPC1	95	70.299	ENSAPEG00000015927	pspc1	78	73.131	Amphiprion_percula
ENSOARG00000014163	PSPC1	95	61.620	ENSATEG00000004878	pspc1	86	57.996	Anabas_testudineus
ENSOARG00000014163	PSPC1	84	90.394	ENSAPLG00000006246	PSPC1	100	93.103	Anas_platyrhynchos
ENSOARG00000014163	PSPC1	95	60.215	ENSAPLG00000003643	SFPQ	67	67.806	Anas_platyrhynchos
ENSOARG00000014163	PSPC1	95	54.428	ENSACAG00000013307	-	54	64.103	Anolis_carolinensis
ENSOARG00000014163	PSPC1	95	89.914	ENSACAG00000002093	PSPC1	88	90.558	Anolis_carolinensis
ENSOARG00000014163	PSPC1	100	91.396	ENSANAG00000000059	PSPC1	100	91.396	Aotus_nancymaae
ENSOARG00000014163	PSPC1	95	61.803	ENSACLG00000027220	pspc1	86	58.836	Astatotilapia_calliptera
ENSOARG00000014163	PSPC1	95	68.908	ENSAMXG00000036881	pspc1	87	69.133	Astyanax_mexicanus
ENSOARG00000014163	PSPC1	100	92.529	ENSBTAG00000003934	PSPC1	100	92.529	Bos_taurus
ENSOARG00000014163	PSPC1	100	91.396	ENSCJAG00000004554	PSPC1	100	91.396	Callithrix_jacchus
ENSOARG00000014163	PSPC1	100	91.587	ENSCAFG00020002009	PSPC1	100	91.587	Canis_lupus_dingo
ENSOARG00000014163	PSPC1	100	92.529	ENSCHIG00000016708	PSPC1	100	92.529	Capra_hircus
ENSOARG00000014163	PSPC1	83	92.040	ENSTSYG00000032882	PSPC1	93	85.816	Carlito_syrichta
ENSOARG00000014163	PSPC1	100	90.996	ENSCPOG00000000395	PSPC1	100	90.996	Cavia_porcellus
ENSOARG00000014163	PSPC1	100	91.396	ENSCCAG00000033498	PSPC1	100	91.396	Cebus_capucinus
ENSOARG00000014163	PSPC1	100	91.048	ENSCATG00000036434	PSPC1	100	91.048	Cercocebus_atys
ENSOARG00000014163	PSPC1	94	88.017	ENSCLAG00000005241	PSPC1	99	88.017	Chinchilla_lanigera
ENSOARG00000014163	PSPC1	100	85.524	ENSCHOG00000008913	PSPC1	100	85.333	Choloepus_hoffmanni
ENSOARG00000014163	PSPC1	95	91.522	ENSCPBG00000020859	PSPC1	88	93.913	Chrysemys_picta_bellii
ENSOARG00000014163	PSPC1	64	58.065	ENSCSAVG00000003533	-	53	61.649	Ciona_savignyi
ENSOARG00000014163	PSPC1	84	85.012	ENSCANG00000018948	PSPC1	87	99.242	Colobus_angolensis_palliatus
ENSOARG00000014163	PSPC1	100	90.840	ENSCGRG00001018368	Pspc1	100	90.840	Cricetulus_griseus_chok1gshd
ENSOARG00000014163	PSPC1	100	90.840	ENSCGRG00000011724	Pspc1	100	90.840	Cricetulus_griseus_crigri
ENSOARG00000014163	PSPC1	94	65.591	ENSCVAG00000007679	-	86	64.946	Cyprinodon_variegatus
ENSOARG00000014163	PSPC1	95	70.613	ENSDARG00000006621	pspc1	100	67.067	Danio_rerio
ENSOARG00000014163	PSPC1	100	90.857	ENSDNOG00000011078	PSPC1	100	90.857	Dasypus_novemcinctus
ENSOARG00000014163	PSPC1	100	88.190	ENSDORG00000016050	Pspc1	100	88.190	Dipodomys_ordii
ENSOARG00000014163	PSPC1	59	100.000	ENSETEG00000000502	-	72	100.000	Echinops_telfairi
ENSOARG00000014163	PSPC1	57	48.185	ENSEBUG00000010133	pspc1	72	50.909	Eptatretus_burgeri
ENSOARG00000014163	PSPC1	94	57.113	ENSEBUG00000003964	-	62	69.164	Eptatretus_burgeri
ENSOARG00000014163	PSPC1	100	92.131	ENSEASG00005000119	PSPC1	100	92.131	Equus_asinus_asinus
ENSOARG00000014163	PSPC1	100	92.131	ENSECAG00000017286	PSPC1	100	92.131	Equus_caballus
ENSOARG00000014163	PSPC1	71	93.443	ENSEEUG00000011288	-	88	80.128	Erinaceus_europaeus
ENSOARG00000014163	PSPC1	95	71.550	ENSELUG00000003746	pspc1	76	82.555	Esox_lucius
ENSOARG00000014163	PSPC1	100	91.778	ENSFCAG00000027841	PSPC1	100	91.778	Felis_catus
ENSOARG00000014163	PSPC1	95	91.957	ENSFALG00000008750	PSPC1	87	94.348	Ficedula_albicollis
ENSOARG00000014163	PSPC1	100	92.773	ENSFDAG00000002617	PSPC1	100	92.773	Fukomys_damarensis
ENSOARG00000014163	PSPC1	94	66.667	ENSGMOG00000015074	pspc1	85	65.525	Gadus_morhua
ENSOARG00000014163	PSPC1	95	91.957	ENSGALG00000017142	PSPC1	88	94.348	Gallus_gallus
ENSOARG00000014163	PSPC1	66	74.383	ENSGAFG00000006327	pspc1	67	77.469	Gambusia_affinis
ENSOARG00000014163	PSPC1	94	65.152	ENSGACG00000014901	pspc1	90	72.923	Gasterosteus_aculeatus
ENSOARG00000014163	PSPC1	95	91.522	ENSGAGG00000019164	PSPC1	88	93.913	Gopherus_agassizii
ENSOARG00000014163	PSPC1	95	59.785	ENSGAGG00000017325	-	54	66.667	Gopherus_agassizii
ENSOARG00000014163	PSPC1	100	90.857	ENSGGOG00000003414	PSPC1	100	90.857	Gorilla_gorilla
ENSOARG00000014163	PSPC1	95	67.888	ENSHBUG00000001139	pspc1	87	69.397	Haplochromis_burtoni
ENSOARG00000014163	PSPC1	100	90.996	ENSHGLG00000018811	PSPC1	100	90.996	Heterocephalus_glaber_female
ENSOARG00000014163	PSPC1	64	94.479	ENSHGLG00100007962	PSPC1	99	94.479	Heterocephalus_glaber_male
ENSOARG00000014163	PSPC1	78	67.895	ENSHCOG00000013251	pspc1	82	69.811	Hippocampus_comes
ENSOARG00000014163	PSPC1	95	71.642	ENSIPUG00000013192	pspc1	87	73.348	Ictalurus_punctatus
ENSOARG00000014163	PSPC1	100	91.048	ENSSTOG00000026833	PSPC1	100	91.048	Ictidomys_tridecemlineatus
ENSOARG00000014163	PSPC1	100	90.840	ENSJJAG00000018334	Pspc1	100	90.840	Jaculus_jaculus
ENSOARG00000014163	PSPC1	95	55.315	ENSKMAG00000013525	-	84	54.212	Kryptolebias_marmoratus
ENSOARG00000014163	PSPC1	94	64.583	ENSLBEG00000004474	pspc1	74	72.155	Labrus_bergylta
ENSOARG00000014163	PSPC1	95	85.000	ENSLACG00000010762	PSPC1	87	85.000	Latimeria_chalumnae
ENSOARG00000014163	PSPC1	95	83.878	ENSLOCG00000010832	pspc1	90	84.096	Lepisosteus_oculatus
ENSOARG00000014163	PSPC1	100	91.221	ENSLAFG00000010968	PSPC1	100	91.221	Loxodonta_africana
ENSOARG00000014163	PSPC1	100	91.048	ENSMFAG00000032728	PSPC1	100	91.048	Macaca_fascicularis
ENSOARG00000014163	PSPC1	100	91.048	ENSMMUG00000020262	PSPC1	100	91.048	Macaca_mulatta
ENSOARG00000014163	PSPC1	100	91.048	ENSMNEG00000027401	PSPC1	100	91.048	Macaca_nemestrina
ENSOARG00000014163	PSPC1	100	98.504	ENSMLEG00000039043	PSPC1	100	98.504	Mandrillus_leucophaeus
ENSOARG00000014163	PSPC1	95	65.631	ENSMAMG00000004333	pspc1	86	62.741	Mastacembelus_armatus
ENSOARG00000014163	PSPC1	95	61.803	ENSMZEG00005005726	pspc1	86	58.836	Maylandia_zebra
ENSOARG00000014163	PSPC1	84	90.196	ENSMGAG00000015134	PSPC1	100	92.892	Meleagris_gallopavo
ENSOARG00000014163	PSPC1	87	84.881	ENSMAUG00000021067	Pspc1	99	84.017	Mesocricetus_auratus
ENSOARG00000014163	PSPC1	100	91.778	ENSMICG00000013970	PSPC1	100	91.778	Microcebus_murinus
ENSOARG00000014163	PSPC1	100	90.840	ENSMOCG00000006060	Pspc1	100	90.840	Microtus_ochrogaster
ENSOARG00000014163	PSPC1	98	43.393	ENSMMOG00000004352	pspc1	59	52.367	Mola_mola
ENSOARG00000014163	PSPC1	92	89.322	ENSMODG00000008029	PSPC1	78	89.322	Monodelphis_domestica
ENSOARG00000014163	PSPC1	95	68.966	ENSMALG00000008914	pspc1	87	67.597	Monopterus_albus
ENSOARG00000014163	PSPC1	100	90.667	MGP_CAROLIEiJ_G0019341	Pspc1	100	90.667	Mus_caroli
ENSOARG00000014163	PSPC1	100	90.857	ENSMUSG00000021938	Pspc1	100	90.857	Mus_musculus
ENSOARG00000014163	PSPC1	100	90.857	MGP_PahariEiJ_G0030359	Pspc1	100	90.857	Mus_pahari
ENSOARG00000014163	PSPC1	100	90.857	MGP_SPRETEiJ_G0020232	Pspc1	100	90.857	Mus_spretus
ENSOARG00000014163	PSPC1	100	91.587	ENSMPUG00000013347	PSPC1	100	91.587	Mustela_putorius_furo
ENSOARG00000014163	PSPC1	100	90.494	ENSMLUG00000017663	PSPC1	100	90.494	Myotis_lucifugus
ENSOARG00000014163	PSPC1	100	90.649	ENSNGAG00000011271	Pspc1	100	90.649	Nannospalax_galili
ENSOARG00000014163	PSPC1	66	70.497	ENSNBRG00000014059	pspc1	75	68.923	Neolamprologus_brichardi
ENSOARG00000014163	PSPC1	100	91.048	ENSNLEG00000001294	PSPC1	100	91.048	Nomascus_leucogenys
ENSOARG00000014163	PSPC1	100	69.714	ENSMEUG00000000476	PSPC1	100	69.714	Notamacropus_eugenii
ENSOARG00000014163	PSPC1	100	77.969	ENSODEG00000007817	-	100	76.660	Octodon_degus
ENSOARG00000014163	PSPC1	100	79.732	ENSODEG00000019012	-	100	79.924	Octodon_degus
ENSOARG00000014163	PSPC1	95	67.888	ENSONIG00000012010	pspc1	86	68.511	Oreochromis_niloticus
ENSOARG00000014163	PSPC1	99	67.262	ENSOANG00000011381	-	99	67.063	Ornithorhynchus_anatinus
ENSOARG00000014163	PSPC1	83	97.007	ENSOANG00000009017	-	100	97.007	Ornithorhynchus_anatinus
ENSOARG00000014163	PSPC1	100	91.048	ENSOCUG00000006153	PSPC1	100	91.048	Oryctolagus_cuniculus
ENSOARG00000014163	PSPC1	95	69.658	ENSORLG00000004232	-	86	64.241	Oryzias_latipes
ENSOARG00000014163	PSPC1	95	68.376	ENSORLG00020000578	PSPC1	86	67.597	Oryzias_latipes_hni
ENSOARG00000014163	PSPC1	95	70.085	ENSORLG00015017480	pspc1	81	68.736	Oryzias_latipes_hsok
ENSOARG00000014163	PSPC1	100	91.429	ENSOGAG00000012643	PSPC1	100	91.429	Otolemur_garnettii
ENSOARG00000014163	PSPC1	100	88.866	ENSPPAG00000009836	PSPC1	91	98.154	Pan_paniscus
ENSOARG00000014163	PSPC1	100	91.778	ENSPPRG00000008833	PSPC1	100	91.778	Panthera_pardus
ENSOARG00000014163	PSPC1	100	86.815	ENSPTIG00000016917	PSPC1	100	86.815	Panthera_tigris_altaica
ENSOARG00000014163	PSPC1	98	89.341	ENSPTRG00000005677	PSPC1	99	90.574	Pan_troglodytes
ENSOARG00000014163	PSPC1	100	91.048	ENSPANG00000001992	PSPC1	100	91.048	Papio_anubis
ENSOARG00000014163	PSPC1	87	75.887	ENSPKIG00000003578	pspc1	88	73.573	Paramormyrops_kingsleyae
ENSOARG00000014163	PSPC1	95	91.304	ENSPSIG00000005168	PSPC1	87	93.696	Pelodiscus_sinensis
ENSOARG00000014163	PSPC1	58	73.852	ENSPMGG00000015135	pspc1	78	73.852	Periophthalmus_magnuspinnatus
ENSOARG00000014163	PSPC1	100	91.031	ENSPEMG00000015214	Pspc1	100	91.031	Peromyscus_maniculatus_bairdii
ENSOARG00000014163	PSPC1	52	48.077	ENSPMAG00000004618	pspc1	79	48.077	Petromyzon_marinus
ENSOARG00000014163	PSPC1	99	90.076	ENSPCIG00000017680	PSPC1	100	90.076	Phascolarctos_cinereus
ENSOARG00000014163	PSPC1	95	68.870	ENSPFOG00000003362	pspc1	87	68.365	Poecilia_formosa
ENSOARG00000014163	PSPC1	72	63.218	ENSPLAG00000004407	-	50	61.602	Poecilia_latipinna
ENSOARG00000014163	PSPC1	95	68.870	ENSPLAG00000011540	pspc1	86	68.365	Poecilia_latipinna
ENSOARG00000014163	PSPC1	95	68.443	ENSPMEG00000008322	pspc1	86	67.941	Poecilia_mexicana
ENSOARG00000014163	PSPC1	72	63.218	ENSPMEG00000001025	-	50	61.602	Poecilia_mexicana
ENSOARG00000014163	PSPC1	95	68.443	ENSPREG00000007786	pspc1	86	67.941	Poecilia_reticulata
ENSOARG00000014163	PSPC1	100	91.013	ENSPPYG00000005186	PSPC1	100	91.013	Pongo_abelii
ENSOARG00000014163	PSPC1	64	98.788	ENSPCAG00000008314	-	66	98.788	Procavia_capensis
ENSOARG00000014163	PSPC1	100	87.238	ENSPCOG00000014364	PSPC1	100	87.238	Propithecus_coquereli
ENSOARG00000014163	PSPC1	100	89.060	ENSPVAG00000005036	PSPC1	100	89.060	Pteropus_vampyrus
ENSOARG00000014163	PSPC1	95	61.803	ENSPNYG00000008893	pspc1	86	58.836	Pundamilia_nyererei
ENSOARG00000014163	PSPC1	95	70.362	ENSPNAG00000016511	pspc1	88	72.495	Pygocentrus_nattereri
ENSOARG00000014163	PSPC1	100	90.840	ENSRNOG00000020782	Pspc1	100	90.840	Rattus_norvegicus
ENSOARG00000014163	PSPC1	95	98.693	ENSRBIG00000036057	PSPC1	94	98.693	Rhinopithecus_bieti
ENSOARG00000014163	PSPC1	100	91.238	ENSRROG00000036334	PSPC1	100	91.238	Rhinopithecus_roxellana
ENSOARG00000014163	PSPC1	86	87.952	ENSSBOG00000028172	PSPC1	90	94.604	Saimiri_boliviensis_boliviensis
ENSOARG00000014163	PSPC1	100	84.688	ENSSHAG00000004696	PSPC1	100	84.571	Sarcophilus_harrisii
ENSOARG00000014163	PSPC1	87	76.596	ENSSFOG00015001395	pspc1	88	78.404	Scleropages_formosus
ENSOARG00000014163	PSPC1	96	64.315	ENSSMAG00000001761	pspc1	82	75.749	Scophthalmus_maximus
ENSOARG00000014163	PSPC1	95	68.432	ENSSDUG00000010651	pspc1	75	74.065	Seriola_dumerili
ENSOARG00000014163	PSPC1	95	63.991	ENSSLDG00000004284	pspc1	85	58.723	Seriola_lalandi_dorsalis
ENSOARG00000014163	PSPC1	100	85.029	ENSSARG00000000888	PSPC1	100	85.029	Sorex_araneus
ENSOARG00000014163	PSPC1	95	79.610	ENSSPUG00000008550	PSPC1	87	80.043	Sphenodon_punctatus
ENSOARG00000014163	PSPC1	95	53.814	ENSSPUG00000001136	-	52	59.259	Sphenodon_punctatus
ENSOARG00000014163	PSPC1	95	68.323	ENSSPAG00000001921	pspc1	87	66.667	Stegastes_partitus
ENSOARG00000014163	PSPC1	100	91.778	ENSSSCG00000009569	PSPC1	100	91.778	Sus_scrofa
ENSOARG00000014163	PSPC1	95	91.957	ENSTGUG00000011295	PSPC1	98	94.348	Taeniopygia_guttata
ENSOARG00000014163	PSPC1	98	61.491	ENSTRUG00000011335	pspc1	89	60.669	Takifugu_rubripes
ENSOARG00000014163	PSPC1	95	64.440	ENSTNIG00000010358	pspc1	88	62.419	Tetraodon_nigroviridis
ENSOARG00000014163	PSPC1	100	72.797	ENSTBEG00000002361	PSPC1	100	71.073	Tupaia_belangeri
ENSOARG00000014163	PSPC1	100	92.131	ENSTTRG00000003343	PSPC1	100	92.131	Tursiops_truncatus
ENSOARG00000014163	PSPC1	64	88.761	ENSUAMG00000012309	PSPC1	99	88.761	Ursus_americanus
ENSOARG00000014163	PSPC1	95	98.475	ENSUMAG00000013993	PSPC1	94	98.475	Ursus_maritimus
ENSOARG00000014163	PSPC1	83	98.504	ENSVPAG00000010029	PSPC1	100	98.504	Vicugna_pacos
ENSOARG00000014163	PSPC1	100	91.587	ENSVVUG00000006414	PSPC1	100	91.587	Vulpes_vulpes
ENSOARG00000014163	PSPC1	66	76.235	ENSXCOG00000017438	pspc1	76	76.543	Xiphophorus_couchianus
ENSOARG00000014163	PSPC1	66	76.543	ENSXMAG00000007929	pspc1	76	76.852	Xiphophorus_maculatus