EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000014587 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 88379 bases
Position: chr13:15653985-15742363
Accession: 101116751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000015653	Upf2	PF04050.14	6.4e-33	1	1
ENSOARP00000015653	MIF4G	PF02854.19	5.2e-75	1	3
ENSOARP00000015653	MIF4G	PF02854.19	5.2e-75	2	3
ENSOARP00000015653	MIF4G	PF02854.19	5.2e-75	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000015884	UPF2-201	3840	XM_004014185	ENSOARP00000015653	1273 (aa)	-	W5PYW7

Gene Model

Click here to download ENSOARG00000014587's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03013	RNA transport	KEGG
oas03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000014587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000014587	UPF2	100	97.567	ENSG00000151461	UPF2	100	97.567	Homo_sapiens
ENSOARG00000014587	UPF2	99	78.733	ENSAPOG00000015837	UPF2	100	78.549	Acanthochromis_polyacanthus
ENSOARG00000014587	UPF2	100	98.900	ENSAMEG00000004586	UPF2	100	98.900	Ailuropoda_melanoleuca
ENSOARG00000014587	UPF2	99	82.917	ENSACIG00000018078	UPF2	100	82.839	Amphilophus_citrinellus
ENSOARG00000014587	UPF2	100	82.944	ENSAOCG00000016766	UPF2	100	83.022	Amphiprion_ocellaris
ENSOARG00000014587	UPF2	100	83.022	ENSAPEG00000019084	UPF2	100	83.100	Amphiprion_percula
ENSOARG00000014587	UPF2	100	82.686	ENSATEG00000021677	UPF2	99	82.737	Anabas_testudineus
ENSOARG00000014587	UPF2	100	87.049	ENSAPLG00000010287	UPF2	90	91.327	Anas_platyrhynchos
ENSOARG00000014587	UPF2	100	92.459	ENSACAG00000009259	UPF2	100	92.459	Anolis_carolinensis
ENSOARG00000014587	UPF2	99	87.520	ENSANAG00000028451	UPF2	99	86.342	Aotus_nancymaae
ENSOARG00000014587	UPF2	100	81.231	ENSACLG00000012696	UPF2	100	83.100	Astatotilapia_calliptera
ENSOARG00000014587	UPF2	99	82.969	ENSAMXG00000013700	UPF2	99	83.359	Astyanax_mexicanus
ENSOARG00000014587	UPF2	100	99.764	ENSBTAG00000000288	UPF2	100	99.764	Bos_taurus
ENSOARG00000014587	UPF2	100	97.488	ENSCJAG00000020685	UPF2	100	97.488	Callithrix_jacchus
ENSOARG00000014587	UPF2	100	99.057	ENSCAFG00000004839	UPF2	100	99.057	Canis_familiaris
ENSOARG00000014587	UPF2	99	96.617	ENSCAFG00020005882	UPF2	100	96.617	Canis_lupus_dingo
ENSOARG00000014587	UPF2	100	99.843	ENSCHIG00000020359	UPF2	100	99.843	Capra_hircus
ENSOARG00000014587	UPF2	100	97.486	ENSTSYG00000000935	UPF2	100	97.486	Carlito_syrichta
ENSOARG00000014587	UPF2	91	87.199	ENSCAPG00000016658	UPF2	95	86.770	Cavia_aperea
ENSOARG00000014587	UPF2	99	95.804	ENSCPOG00000008809	UPF2	99	95.804	Cavia_porcellus
ENSOARG00000014587	UPF2	100	91.202	ENSCCAG00000035991	UPF2	100	91.523	Cebus_capucinus
ENSOARG00000014587	UPF2	100	97.724	ENSCATG00000032679	UPF2	100	97.724	Cercocebus_atys
ENSOARG00000014587	UPF2	100	97.565	ENSCLAG00000011434	UPF2	100	97.565	Chinchilla_lanigera
ENSOARG00000014587	UPF2	100	97.802	ENSCSAG00000013372	UPF2	100	97.802	Chlorocebus_sabaeus
ENSOARG00000014587	UPF2	87	98.884	ENSCHOG00000000422	UPF2	89	98.884	Choloepus_hoffmanni
ENSOARG00000014587	UPF2	99	93.312	ENSCPBG00000027823	UPF2	100	93.155	Chrysemys_picta_bellii
ENSOARG00000014587	UPF2	79	48.867	ENSCSAVG00000007772	-	78	50.775	Ciona_savignyi
ENSOARG00000014587	UPF2	99	91.342	ENSCANG00000040396	UPF2	100	91.987	Colobus_angolensis_palliatus
ENSOARG00000014587	UPF2	100	97.800	ENSCGRG00001019347	Upf2	100	97.800	Cricetulus_griseus_chok1gshd
ENSOARG00000014587	UPF2	100	97.800	ENSCGRG00000017993	Upf2	100	97.800	Cricetulus_griseus_crigri
ENSOARG00000014587	UPF2	91	80.756	ENSCSEG00000003520	UPF2	71	83.278	Cynoglossus_semilaevis
ENSOARG00000014587	UPF2	99	82.902	ENSCVAG00000006167	UPF2	100	82.431	Cyprinodon_variegatus
ENSOARG00000014587	UPF2	100	98.429	ENSDNOG00000018160	UPF2	100	98.429	Dasypus_novemcinctus
ENSOARG00000014587	UPF2	100	97.800	ENSDORG00000002478	Upf2	100	97.800	Dipodomys_ordii
ENSOARG00000014587	UPF2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSOARG00000014587	UPF2	68	68.358	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSOARG00000014587	UPF2	100	98.586	ENSEASG00005019274	UPF2	100	98.586	Equus_asinus_asinus
ENSOARG00000014587	UPF2	100	98.665	ENSECAG00000017022	UPF2	100	98.665	Equus_caballus
ENSOARG00000014587	UPF2	82	94.603	ENSEEUG00000007819	UPF2	82	94.603	Erinaceus_europaeus
ENSOARG00000014587	UPF2	99	81.747	ENSELUG00000012014	UPF2	100	82.157	Esox_lucius
ENSOARG00000014587	UPF2	100	98.900	ENSFCAG00000005785	UPF2	100	98.900	Felis_catus
ENSOARG00000014587	UPF2	100	93.873	ENSFALG00000001889	UPF2	98	93.873	Ficedula_albicollis
ENSOARG00000014587	UPF2	100	97.408	ENSFDAG00000014348	UPF2	100	97.408	Fukomys_damarensis
ENSOARG00000014587	UPF2	99	83.346	ENSFHEG00000009826	UPF2	99	83.004	Fundulus_heteroclitus
ENSOARG00000014587	UPF2	91	83.707	ENSGMOG00000005557	UPF2	91	83.419	Gadus_morhua
ENSOARG00000014587	UPF2	100	94.035	ENSGALG00000033772	UPF2	100	94.035	Gallus_gallus
ENSOARG00000014587	UPF2	100	79.751	ENSGAFG00000020867	UPF2	100	81.776	Gambusia_affinis
ENSOARG00000014587	UPF2	90	84.152	ENSGACG00000001080	UPF2	100	82.215	Gasterosteus_aculeatus
ENSOARG00000014587	UPF2	100	93.559	ENSGAGG00000002700	UPF2	100	93.559	Gopherus_agassizii
ENSOARG00000014587	UPF2	100	97.567	ENSGGOG00000001479	UPF2	100	97.567	Gorilla_gorilla
ENSOARG00000014587	UPF2	100	81.075	ENSHBUG00000004249	UPF2	100	83.073	Haplochromis_burtoni
ENSOARG00000014587	UPF2	100	97.565	ENSHGLG00000015176	-	100	97.565	Heterocephalus_glaber_female
ENSOARG00000014587	UPF2	99	86.557	ENSHGLG00000003822	-	99	85.299	Heterocephalus_glaber_female
ENSOARG00000014587	UPF2	99	94.335	ENSHGLG00100010036	UPF2	100	94.020	Heterocephalus_glaber_male
ENSOARG00000014587	UPF2	100	80.605	ENSHCOG00000004025	UPF2	99	80.605	Hippocampus_comes
ENSOARG00000014587	UPF2	100	81.698	ENSIPUG00000015524	UPF2	100	82.073	Ictalurus_punctatus
ENSOARG00000014587	UPF2	100	98.350	ENSSTOG00000013075	UPF2	100	98.350	Ictidomys_tridecemlineatus
ENSOARG00000014587	UPF2	100	96.858	ENSJJAG00000004913	Upf2	100	96.858	Jaculus_jaculus
ENSOARG00000014587	UPF2	92	84.622	ENSKMAG00000001071	UPF2	92	84.426	Kryptolebias_marmoratus
ENSOARG00000014587	UPF2	99	81.123	ENSLBEG00000016394	-	99	83.061	Labrus_bergylta
ENSOARG00000014587	UPF2	78	84.105	ENSLBEG00000000728	-	92	84.205	Labrus_bergylta
ENSOARG00000014587	UPF2	99	79.812	ENSLACG00000015945	UPF2	100	79.734	Latimeria_chalumnae
ENSOARG00000014587	UPF2	99	86.467	ENSLOCG00000015698	UPF2	100	86.389	Lepisosteus_oculatus
ENSOARG00000014587	UPF2	100	97.645	ENSMFAG00000043865	UPF2	100	97.645	Macaca_fascicularis
ENSOARG00000014587	UPF2	100	97.645	ENSMMUG00000008241	UPF2	100	97.645	Macaca_mulatta
ENSOARG00000014587	UPF2	81	96.884	ENSMNEG00000008062	UPF2	100	96.884	Macaca_nemestrina
ENSOARG00000014587	UPF2	95	98.798	ENSMLEG00000036120	UPF2	100	98.798	Mandrillus_leucophaeus
ENSOARG00000014587	UPF2	100	82.453	ENSMAMG00000018276	UPF2	100	82.582	Mastacembelus_armatus
ENSOARG00000014587	UPF2	100	81.231	ENSMZEG00005021595	UPF2	100	83.100	Maylandia_zebra
ENSOARG00000014587	UPF2	99	93.166	ENSMGAG00000004573	UPF2	99	93.166	Meleagris_gallopavo
ENSOARG00000014587	UPF2	100	95.444	ENSMAUG00000016512	Upf2	100	95.444	Mesocricetus_auratus
ENSOARG00000014587	UPF2	95	98.980	ENSMICG00000001716	UPF2	99	98.964	Microcebus_murinus
ENSOARG00000014587	UPF2	100	96.858	ENSMOCG00000008263	Upf2	100	96.858	Microtus_ochrogaster
ENSOARG00000014587	UPF2	90	83.058	ENSMMOG00000006528	UPF2	100	79.001	Mola_mola
ENSOARG00000014587	UPF2	100	96.229	ENSMODG00000016794	UPF2	100	96.229	Monodelphis_domestica
ENSOARG00000014587	UPF2	99	82.592	ENSMALG00000002663	UPF2	100	82.486	Monopterus_albus
ENSOARG00000014587	UPF2	100	97.251	MGP_CAROLIEiJ_G0023157	Upf2	100	98.082	Mus_caroli
ENSOARG00000014587	UPF2	100	97.251	ENSMUSG00000043241	Upf2	100	97.251	Mus_musculus
ENSOARG00000014587	UPF2	100	96.858	MGP_PahariEiJ_G0019217	Upf2	100	96.964	Mus_pahari
ENSOARG00000014587	UPF2	100	97.486	MGP_SPRETEiJ_G0024075	Upf2	100	97.486	Mus_spretus
ENSOARG00000014587	UPF2	100	98.743	ENSMPUG00000001064	UPF2	100	98.743	Mustela_putorius_furo
ENSOARG00000014587	UPF2	99	97.882	ENSMLUG00000000228	UPF2	100	97.882	Myotis_lucifugus
ENSOARG00000014587	UPF2	100	81.231	ENSNBRG00000013629	UPF2	100	83.100	Neolamprologus_brichardi
ENSOARG00000014587	UPF2	100	97.567	ENSNLEG00000012058	UPF2	100	97.567	Nomascus_leucogenys
ENSOARG00000014587	UPF2	56	97.409	ENSMEUG00000002180	-	54	97.409	Notamacropus_eugenii
ENSOARG00000014587	UPF2	77	100.000	ENSOPRG00000006801	-	77	100.000	Ochotona_princeps
ENSOARG00000014587	UPF2	100	97.251	ENSODEG00000001290	UPF2	100	97.251	Octodon_degus
ENSOARG00000014587	UPF2	100	81.308	ENSONIG00000017991	UPF2	100	83.178	Oreochromis_niloticus
ENSOARG00000014587	UPF2	99	97.261	ENSOCUG00000006230	UPF2	100	97.261	Oryctolagus_cuniculus
ENSOARG00000014587	UPF2	100	81.119	ENSORLG00000017189	UPF2	100	82.165	Oryzias_latipes
ENSOARG00000014587	UPF2	100	81.041	ENSORLG00020005969	UPF2	100	82.165	Oryzias_latipes_hni
ENSOARG00000014587	UPF2	100	81.041	ENSORLG00015005713	UPF2	100	82.165	Oryzias_latipes_hsok
ENSOARG00000014587	UPF2	99	77.804	ENSOMEG00000023420	UPF2	98	79.157	Oryzias_melastigma
ENSOARG00000014587	UPF2	100	97.643	ENSOGAG00000005796	UPF2	100	97.643	Otolemur_garnettii
ENSOARG00000014587	UPF2	99	93.599	ENSPPAG00000037953	UPF2	100	94.340	Pan_paniscus
ENSOARG00000014587	UPF2	100	98.900	ENSPPRG00000000690	UPF2	100	98.900	Panthera_pardus
ENSOARG00000014587	UPF2	100	98.900	ENSPTIG00000008867	UPF2	100	98.900	Panthera_tigris_altaica
ENSOARG00000014587	UPF2	100	97.567	ENSPTRG00000002291	UPF2	100	97.567	Pan_troglodytes
ENSOARG00000014587	UPF2	100	97.724	ENSPANG00000023399	UPF2	100	97.724	Papio_anubis
ENSOARG00000014587	UPF2	100	80.296	ENSPKIG00000025502	UPF2	100	80.997	Paramormyrops_kingsleyae
ENSOARG00000014587	UPF2	59	93.094	ENSPSIG00000015158	UPF2	95	93.094	Pelodiscus_sinensis
ENSOARG00000014587	UPF2	99	80.157	ENSPMGG00000005259	UPF2	100	81.098	Periophthalmus_magnuspinnatus
ENSOARG00000014587	UPF2	93	95.918	ENSPEMG00000015731	Upf2	99	95.918	Peromyscus_maniculatus_bairdii
ENSOARG00000014587	UPF2	100	95.837	ENSPCIG00000006656	UPF2	100	95.837	Phascolarctos_cinereus
ENSOARG00000014587	UPF2	100	80.062	ENSPFOG00000017118	UPF2	100	82.243	Poecilia_formosa
ENSOARG00000014587	UPF2	100	80.062	ENSPLAG00000005094	UPF2	100	82.243	Poecilia_latipinna
ENSOARG00000014587	UPF2	100	80.062	ENSPMEG00000017009	UPF2	100	82.243	Poecilia_mexicana
ENSOARG00000014587	UPF2	99	79.750	ENSPREG00000021880	UPF2	100	82.252	Poecilia_reticulata
ENSOARG00000014587	UPF2	66	98.807	ENSPPYG00000002089	-	100	98.807	Pongo_abelii
ENSOARG00000014587	UPF2	100	84.525	ENSPCAG00000000684	UPF2	100	84.525	Procavia_capensis
ENSOARG00000014587	UPF2	99	94.886	ENSPCOG00000021656	UPF2	100	94.965	Propithecus_coquereli
ENSOARG00000014587	UPF2	100	90.973	ENSPVAG00000017286	UPF2	100	90.973	Pteropus_vampyrus
ENSOARG00000014587	UPF2	99	78.783	ENSPNYG00000017096	UPF2	100	80.655	Pundamilia_nyererei
ENSOARG00000014587	UPF2	100	83.255	ENSPNAG00000009357	UPF2	100	83.801	Pygocentrus_nattereri
ENSOARG00000014587	UPF2	99	91.379	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSOARG00000014587	UPF2	99	96.617	ENSRBIG00000037780	UPF2	100	96.617	Rhinopithecus_bieti
ENSOARG00000014587	UPF2	100	97.567	ENSRROG00000043547	UPF2	100	97.567	Rhinopithecus_roxellana
ENSOARG00000014587	UPF2	100	97.331	ENSSBOG00000020012	UPF2	100	97.331	Saimiri_boliviensis_boliviensis
ENSOARG00000014587	UPF2	100	81.556	ENSSFOG00015023788	upf2	100	83.113	Scleropages_formosus
ENSOARG00000014587	UPF2	90	82.857	ENSSMAG00000007637	UPF2	100	79.163	Scophthalmus_maximus
ENSOARG00000014587	UPF2	100	82.995	ENSSDUG00000017244	UPF2	99	83.178	Seriola_dumerili
ENSOARG00000014587	UPF2	99	81.314	ENSSLDG00000016866	UPF2	100	81.470	Seriola_lalandi_dorsalis
ENSOARG00000014587	UPF2	100	96.072	ENSSARG00000008615	UPF2	100	96.072	Sorex_araneus
ENSOARG00000014587	UPF2	99	90.566	ENSSPUG00000014544	UPF2	99	90.566	Sphenodon_punctatus
ENSOARG00000014587	UPF2	68	98.507	ENSSSCG00000011117	-	100	98.507	Sus_scrofa
ENSOARG00000014587	UPF2	99	93.858	ENSTGUG00000002163	-	100	93.858	Taeniopygia_guttata
ENSOARG00000014587	UPF2	100	81.960	ENSTRUG00000007519	UPF2	99	81.931	Takifugu_rubripes
ENSOARG00000014587	UPF2	100	79.658	ENSTNIG00000004453	UPF2	100	79.238	Tetraodon_nigroviridis
ENSOARG00000014587	UPF2	93	90.279	ENSTBEG00000012679	UPF2	93	90.617	Tupaia_belangeri
ENSOARG00000014587	UPF2	100	98.979	ENSTTRG00000016388	UPF2	100	98.979	Tursiops_truncatus
ENSOARG00000014587	UPF2	95	99.306	ENSUAMG00000023560	UPF2	100	98.961	Ursus_americanus
ENSOARG00000014587	UPF2	100	99.057	ENSUMAG00000012953	UPF2	95	99.057	Ursus_maritimus
ENSOARG00000014587	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSOARG00000014587	UPF2	100	98.979	ENSVVUG00000006166	UPF2	100	98.979	Vulpes_vulpes
ENSOARG00000014587	UPF2	100	82.655	ENSXETG00000033103	UPF2	100	81.069	Xenopus_tropicalis
ENSOARG00000014587	UPF2	99	79.517	ENSXCOG00000011604	UPF2	100	81.903	Xiphophorus_couchianus
ENSOARG00000014587	UPF2	100	79.907	ENSXMAG00000017209	UPF2	100	81.931	Xiphophorus_maculatus