EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000014638 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA1
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 62841 bases
Position: chrX:107717855-107780695
Accession: 101119536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000015702	ResIII	PF04851.15	5.1e-12	1	1
ENSOARP00000015704	ResIII	PF04851.15	5.4e-12	1	1
ENSOARP00000015704	DEAD	PF00270.29	9.8e-07	1	1
ENSOARP00000015702	DEAD	PF00270.29	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000015936	SMARCA1-202	3003	XM_004022373	ENSOARP00000015704	980 (aa)	-	W5PZ18
ENSOART00000015934	SMARCA1-201	3042	-	ENSOARP00000015702	1013 (aa)	-	W5PZ16

Gene Model

Click here to download ENSOARG00000014638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000014638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000014638	SMARCA1	99	86.111	ENSOARG00000010589	SMARCA5	92	86.111
ENSOARG00000014638	SMARCA1	58	42.660	ENSOARG00000020547	CHD1L	64	42.857
ENSOARG00000014638	SMARCA1	51	48.548	ENSOARG00000004495	HELLS	64	48.207
ENSOARG00000014638	SMARCA1	52	32.399	ENSOARG00000007691	-	68	32.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000014638	SMARCA1	100	98.878	ENSG00000102038	SMARCA1	95	97.335	Homo_sapiens
ENSOARG00000014638	SMARCA1	99	83.402	ENSAPOG00000016035	smarca5	98	83.917	Acanthochromis_polyacanthus
ENSOARG00000014638	SMARCA1	100	97.782	ENSAMEG00000015218	SMARCA1	95	97.730	Ailuropoda_melanoleuca
ENSOARG00000014638	SMARCA1	92	83.942	ENSACIG00000016982	smarca5	99	84.040	Amphilophus_citrinellus
ENSOARG00000014638	SMARCA1	99	83.402	ENSAOCG00000015578	smarca5	94	83.402	Amphiprion_ocellaris
ENSOARG00000014638	SMARCA1	99	83.402	ENSAPEG00000011117	smarca5	99	83.962	Amphiprion_percula
ENSOARG00000014638	SMARCA1	99	83.231	ENSATEG00000012894	smarca5	93	84.477	Anabas_testudineus
ENSOARG00000014638	SMARCA1	100	92.653	ENSAPLG00000013149	SMARCA1	99	92.653	Anas_platyrhynchos
ENSOARG00000014638	SMARCA1	100	91.735	ENSACAG00000011376	SMARCA1	95	90.128	Anolis_carolinensis
ENSOARG00000014638	SMARCA1	100	93.469	ENSANAG00000023098	SMARCA1	94	92.103	Aotus_nancymaae
ENSOARG00000014638	SMARCA1	99	83.640	ENSACLG00000025356	smarca5	94	83.640	Astatotilapia_calliptera
ENSOARG00000014638	SMARCA1	95	88.280	ENSAMXG00000011227	smarca1	99	89.818	Astyanax_mexicanus
ENSOARG00000014638	SMARCA1	99	83.951	ENSAMXG00000005709	smarca5	94	83.692	Astyanax_mexicanus
ENSOARG00000014638	SMARCA1	99	99.796	ENSBTAG00000002292	SMARCA1	94	98.586	Bos_taurus
ENSOARG00000014638	SMARCA1	100	62.993	WBGene00002169	isw-1	97	62.993	Caenorhabditis_elegans
ENSOARG00000014638	SMARCA1	100	98.673	ENSCJAG00000002868	SMARCA1	95	97.038	Callithrix_jacchus
ENSOARG00000014638	SMARCA1	100	88.265	ENSCAFG00000018673	SMARCA1	99	88.588	Canis_familiaris
ENSOARG00000014638	SMARCA1	100	99.286	ENSCAFG00020001751	SMARCA1	95	97.828	Canis_lupus_dingo
ENSOARG00000014638	SMARCA1	100	100.000	ENSCHIG00000009837	SMARCA1	94	98.717	Capra_hircus
ENSOARG00000014638	SMARCA1	100	98.163	ENSTSYG00000004240	SMARCA1	98	96.076	Carlito_syrichta
ENSOARG00000014638	SMARCA1	100	97.059	ENSCPOG00000013601	SMARCA1	95	96.162	Cavia_porcellus
ENSOARG00000014638	SMARCA1	100	95.408	ENSCCAG00000030817	SMARCA1	94	93.978	Cebus_capucinus
ENSOARG00000014638	SMARCA1	100	97.681	ENSCATG00000015921	SMARCA1	95	97.335	Cercocebus_atys
ENSOARG00000014638	SMARCA1	100	97.551	ENSCLAG00000002171	SMARCA1	95	96.150	Chinchilla_lanigera
ENSOARG00000014638	SMARCA1	100	98.878	ENSCSAG00000008460	SMARCA1	95	97.236	Chlorocebus_sabaeus
ENSOARG00000014638	SMARCA1	100	93.061	ENSCPBG00000001146	SMARCA1	93	93.061	Chrysemys_picta_bellii
ENSOARG00000014638	SMARCA1	99	73.695	ENSCING00000004110	swi/snf	97	73.695	Ciona_intestinalis
ENSOARG00000014638	SMARCA1	99	73.203	ENSCSAVG00000004620	-	100	74.165	Ciona_savignyi
ENSOARG00000014638	SMARCA1	100	98.776	ENSCANG00000007183	SMARCA1	95	97.236	Colobus_angolensis_palliatus
ENSOARG00000014638	SMARCA1	100	96.837	ENSCGRG00001010776	Smarca1	93	96.837	Cricetulus_griseus_chok1gshd
ENSOARG00000014638	SMARCA1	98	96.050	ENSCGRG00000015301	Smarca1	98	94.848	Cricetulus_griseus_crigri
ENSOARG00000014638	SMARCA1	99	83.402	ENSCSEG00000000328	smarca5	94	83.333	Cynoglossus_semilaevis
ENSOARG00000014638	SMARCA1	99	83.231	ENSCVAG00000008668	smarca5	99	83.510	Cyprinodon_variegatus
ENSOARG00000014638	SMARCA1	99	86.044	ENSDARG00000012776	smarca1	98	84.113	Danio_rerio
ENSOARG00000014638	SMARCA1	99	83.282	ENSDARG00000052348	smarca5	94	83.282	Danio_rerio
ENSOARG00000014638	SMARCA1	98	97.179	ENSDNOG00000004315	SMARCA1	94	95.556	Dasypus_novemcinctus
ENSOARG00000014638	SMARCA1	98	97.179	ENSDORG00000009270	Smarca1	94	95.657	Dipodomys_ordii
ENSOARG00000014638	SMARCA1	99	72.791	FBgn0011604	Iswi	97	72.610	Drosophila_melanogaster
ENSOARG00000014638	SMARCA1	83	93.750	ENSETEG00000017426	SMARCA1	85	93.750	Echinops_telfairi
ENSOARG00000014638	SMARCA1	99	81.001	ENSEBUG00000001239	smarca5	96	81.001	Eptatretus_burgeri
ENSOARG00000014638	SMARCA1	100	93.394	ENSEASG00005008218	SMARCA1	99	93.414	Equus_asinus_asinus
ENSOARG00000014638	SMARCA1	100	99.184	ENSECAG00000012106	SMARCA1	94	97.730	Equus_caballus
ENSOARG00000014638	SMARCA1	81	98.013	ENSEEUG00000014927	SMARCA1	83	98.013	Erinaceus_europaeus
ENSOARG00000014638	SMARCA1	100	87.080	ENSELUG00000010515	smarca1	96	87.559	Esox_lucius
ENSOARG00000014638	SMARCA1	100	99.082	ENSFCAG00000018496	SMARCA1	95	97.631	Felis_catus
ENSOARG00000014638	SMARCA1	93	92.662	ENSFALG00000000209	SMARCA1	98	92.763	Ficedula_albicollis
ENSOARG00000014638	SMARCA1	98	96.904	ENSFDAG00000009818	SMARCA1	97	96.667	Fukomys_damarensis
ENSOARG00000014638	SMARCA1	99	83.333	ENSFHEG00000007687	smarca5	91	85.380	Fundulus_heteroclitus
ENSOARG00000014638	SMARCA1	96	93.404	ENSGALG00000008431	SMARCA1	97	91.296	Gallus_gallus
ENSOARG00000014638	SMARCA1	99	83.333	ENSGAFG00000017731	smarca5	94	83.333	Gambusia_affinis
ENSOARG00000014638	SMARCA1	99	93.107	ENSGAGG00000023575	SMARCA1	100	93.107	Gopherus_agassizii
ENSOARG00000014638	SMARCA1	74	96.000	ENSGGOG00000012841	-	95	96.000	Gorilla_gorilla
ENSOARG00000014638	SMARCA1	100	96.939	ENSHGLG00000003080	SMARCA1	95	95.558	Heterocephalus_glaber_female
ENSOARG00000014638	SMARCA1	100	96.349	ENSHGLG00100001102	SMARCA1	99	96.349	Heterocephalus_glaber_male
ENSOARG00000014638	SMARCA1	99	83.231	ENSHCOG00000005458	smarca5	94	83.231	Hippocampus_comes
ENSOARG00000014638	SMARCA1	99	87.090	ENSIPUG00000016905	Smarca1	99	87.090	Ictalurus_punctatus
ENSOARG00000014638	SMARCA1	99	82.974	ENSIPUG00000005229	SMARCA5	96	82.974	Ictalurus_punctatus
ENSOARG00000014638	SMARCA1	100	98.571	ENSSTOG00000014524	SMARCA1	94	98.558	Ictidomys_tridecemlineatus
ENSOARG00000014638	SMARCA1	100	96.751	ENSJJAG00000002593	Smarca1	95	95.088	Jaculus_jaculus
ENSOARG00000014638	SMARCA1	99	83.742	ENSKMAG00000003777	smarca5	94	83.742	Kryptolebias_marmoratus
ENSOARG00000014638	SMARCA1	99	82.840	ENSLBEG00000018112	smarca5	94	82.840	Labrus_bergylta
ENSOARG00000014638	SMARCA1	94	84.130	ENSLBEG00000013295	SMARCA1	100	84.703	Labrus_bergylta
ENSOARG00000014638	SMARCA1	100	90.408	ENSLACG00000016697	SMARCA1	98	88.746	Latimeria_chalumnae
ENSOARG00000014638	SMARCA1	100	89.286	ENSLOCG00000014591	smarca1	97	87.426	Lepisosteus_oculatus
ENSOARG00000014638	SMARCA1	100	96.552	ENSLAFG00000000896	SMARCA1	100	94.995	Loxodonta_africana
ENSOARG00000014638	SMARCA1	100	98.878	ENSMFAG00000002117	SMARCA1	97	97.077	Macaca_fascicularis
ENSOARG00000014638	SMARCA1	100	97.681	ENSMMUG00000008818	SMARCA1	99	98.220	Macaca_mulatta
ENSOARG00000014638	SMARCA1	100	97.681	ENSMNEG00000041768	SMARCA1	97	97.077	Macaca_nemestrina
ENSOARG00000014638	SMARCA1	100	98.776	ENSMLEG00000043198	SMARCA1	95	97.236	Mandrillus_leucophaeus
ENSOARG00000014638	SMARCA1	99	83.640	ENSMAMG00000014294	smarca5	94	83.640	Mastacembelus_armatus
ENSOARG00000014638	SMARCA1	99	83.640	ENSMZEG00005009369	smarca5	94	83.640	Maylandia_zebra
ENSOARG00000014638	SMARCA1	100	91.431	ENSMGAG00000007042	SMARCA1	99	90.918	Meleagris_gallopavo
ENSOARG00000014638	SMARCA1	98	96.778	ENSMAUG00000008133	Smarca1	94	95.556	Mesocricetus_auratus
ENSOARG00000014638	SMARCA1	100	98.469	ENSMICG00000015768	SMARCA1	95	97.038	Microcebus_murinus
ENSOARG00000014638	SMARCA1	100	96.345	ENSMOCG00000009464	Smarca1	95	94.794	Microtus_ochrogaster
ENSOARG00000014638	SMARCA1	99	81.595	ENSMMOG00000005547	smarca5	98	81.595	Mola_mola
ENSOARG00000014638	SMARCA1	100	91.939	ENSMODG00000013187	-	96	90.030	Monodelphis_domestica
ENSOARG00000014638	SMARCA1	99	83.027	ENSMALG00000002081	smarca5	96	83.333	Monopterus_albus
ENSOARG00000014638	SMARCA1	100	96.853	MGP_CAROLIEiJ_G0033034	Smarca1	95	95.285	Mus_caroli
ENSOARG00000014638	SMARCA1	100	96.853	ENSMUSG00000031099	Smarca1	95	95.383	Mus_musculus
ENSOARG00000014638	SMARCA1	100	96.751	MGP_PahariEiJ_G0031579	Smarca1	95	95.187	Mus_pahari
ENSOARG00000014638	SMARCA1	100	96.853	MGP_SPRETEiJ_G0034192	Smarca1	95	95.383	Mus_spretus
ENSOARG00000014638	SMARCA1	100	97.883	ENSMPUG00000017423	SMARCA1	89	97.631	Mustela_putorius_furo
ENSOARG00000014638	SMARCA1	100	96.154	ENSMLUG00000029614	SMARCA1	95	95.759	Myotis_lucifugus
ENSOARG00000014638	SMARCA1	98	97.505	ENSNGAG00000006492	Smarca1	94	96.465	Nannospalax_galili
ENSOARG00000014638	SMARCA1	99	83.742	ENSNBRG00000004463	smarca5	98	83.742	Neolamprologus_brichardi
ENSOARG00000014638	SMARCA1	100	96.875	ENSNLEG00000015179	SMARCA1	98	96.173	Nomascus_leucogenys
ENSOARG00000014638	SMARCA1	94	82.189	ENSMEUG00000008819	SMARCA1	100	81.637	Notamacropus_eugenii
ENSOARG00000014638	SMARCA1	98	95.769	ENSODEG00000012163	SMARCA1	94	95.455	Octodon_degus
ENSOARG00000014638	SMARCA1	99	83.742	ENSONIG00000009993	smarca5	94	83.742	Oreochromis_niloticus
ENSOARG00000014638	SMARCA1	99	93.210	ENSOANG00000002862	SMARCA1	100	93.210	Ornithorhynchus_anatinus
ENSOARG00000014638	SMARCA1	100	97.347	ENSOCUG00000001047	SMARCA1	95	95.755	Oryctolagus_cuniculus
ENSOARG00000014638	SMARCA1	99	83.333	ENSORLG00000021998	smarca5	94	83.333	Oryzias_latipes
ENSOARG00000014638	SMARCA1	99	83.436	ENSORLG00020017679	smarca5	94	83.436	Oryzias_latipes_hni
ENSOARG00000014638	SMARCA1	99	83.333	ENSORLG00015017210	smarca5	94	83.333	Oryzias_latipes_hsok
ENSOARG00000014638	SMARCA1	99	83.333	ENSOMEG00000000086	smarca5	94	83.333	Oryzias_melastigma
ENSOARG00000014638	SMARCA1	98	97.110	ENSOGAG00000004399	SMARCA1	94	96.768	Otolemur_garnettii
ENSOARG00000014638	SMARCA1	100	98.878	ENSPPAG00000034647	SMARCA1	95	97.335	Pan_paniscus
ENSOARG00000014638	SMARCA1	100	99.286	ENSPPRG00000008929	SMARCA1	95	97.828	Panthera_pardus
ENSOARG00000014638	SMARCA1	100	97.247	ENSPTIG00000000915	SMARCA1	98	97.247	Panthera_tigris_altaica
ENSOARG00000014638	SMARCA1	100	98.878	ENSPTRG00000049876	SMARCA1	95	97.335	Pan_troglodytes
ENSOARG00000014638	SMARCA1	100	98.878	ENSPANG00000003871	SMARCA1	95	97.335	Papio_anubis
ENSOARG00000014638	SMARCA1	95	88.185	ENSPKIG00000013411	smarca1	96	87.975	Paramormyrops_kingsleyae
ENSOARG00000014638	SMARCA1	99	92.798	ENSPSIG00000010101	SMARCA1	100	92.798	Pelodiscus_sinensis
ENSOARG00000014638	SMARCA1	98	97.297	ENSPEMG00000017503	Smarca1	94	96.263	Peromyscus_maniculatus_bairdii
ENSOARG00000014638	SMARCA1	100	92.551	ENSPCIG00000015460	SMARCA1	98	90.721	Phascolarctos_cinereus
ENSOARG00000014638	SMARCA1	99	83.436	ENSPFOG00000007649	smarca5	94	83.436	Poecilia_formosa
ENSOARG00000014638	SMARCA1	99	83.436	ENSPLAG00000003363	smarca5	94	83.436	Poecilia_latipinna
ENSOARG00000014638	SMARCA1	99	83.333	ENSPMEG00000019849	smarca5	94	83.333	Poecilia_mexicana
ENSOARG00000014638	SMARCA1	99	83.333	ENSPREG00000023250	smarca5	94	83.333	Poecilia_reticulata
ENSOARG00000014638	SMARCA1	100	96.020	ENSPPYG00000020703	SMARCA1	95	94.571	Pongo_abelii
ENSOARG00000014638	SMARCA1	82	89.189	ENSPCOG00000020722	SMARCA1	94	92.658	Propithecus_coquereli
ENSOARG00000014638	SMARCA1	92	96.970	ENSPVAG00000003805	SMARCA1	88	96.053	Pteropus_vampyrus
ENSOARG00000014638	SMARCA1	59	84.765	ENSPNYG00000012299	smarca5	91	83.243	Pundamilia_nyererei
ENSOARG00000014638	SMARCA1	100	97.449	ENSRNOG00000003762	Smarca1	95	95.854	Rattus_norvegicus
ENSOARG00000014638	SMARCA1	100	98.776	ENSRROG00000034167	SMARCA1	95	97.236	Rhinopithecus_roxellana
ENSOARG00000014638	SMARCA1	100	98.673	ENSSBOG00000020641	SMARCA1	100	98.673	Saimiri_boliviensis_boliviensis
ENSOARG00000014638	SMARCA1	99	86.434	ENSSHAG00000013518	SMARCA1	99	86.434	Sarcophilus_harrisii
ENSOARG00000014638	SMARCA1	99	83.402	ENSSFOG00015016794	smarca5	100	83.402	Scleropages_formosus
ENSOARG00000014638	SMARCA1	100	88.301	ENSSFOG00015009043	smarca1	98	86.364	Scleropages_formosus
ENSOARG00000014638	SMARCA1	99	82.618	ENSSMAG00000004801	smarca5	94	82.618	Scophthalmus_maximus
ENSOARG00000014638	SMARCA1	99	83.129	ENSSDUG00000020690	smarca5	94	83.129	Seriola_dumerili
ENSOARG00000014638	SMARCA1	99	83.129	ENSSLDG00000025190	smarca5	94	83.129	Seriola_lalandi_dorsalis
ENSOARG00000014638	SMARCA1	83	96.809	ENSSARG00000000842	SMARCA1	83	96.809	Sorex_araneus
ENSOARG00000014638	SMARCA1	98	92.259	ENSSPUG00000000590	SMARCA1	93	92.259	Sphenodon_punctatus
ENSOARG00000014638	SMARCA1	99	83.402	ENSSPAG00000002894	smarca5	97	83.917	Stegastes_partitus
ENSOARG00000014638	SMARCA1	99	99.075	ENSSSCG00000012649	SMARCA1	94	99.075	Sus_scrofa
ENSOARG00000014638	SMARCA1	100	92.143	ENSTGUG00000003899	-	99	92.143	Taeniopygia_guttata
ENSOARG00000014638	SMARCA1	99	83.402	ENSTRUG00000014094	smarca5	94	83.402	Takifugu_rubripes
ENSOARG00000014638	SMARCA1	99	82.480	ENSTNIG00000017717	smarca5	93	82.480	Tetraodon_nigroviridis
ENSOARG00000014638	SMARCA1	98	89.798	ENSTBEG00000014973	SMARCA1	99	89.798	Tupaia_belangeri
ENSOARG00000014638	SMARCA1	98	94.943	ENSTTRG00000006168	SMARCA1	99	94.614	Tursiops_truncatus
ENSOARG00000014638	SMARCA1	100	98.980	ENSUAMG00000020201	SMARCA1	95	97.335	Ursus_americanus
ENSOARG00000014638	SMARCA1	100	93.347	ENSUMAG00000004073	SMARCA1	97	98.783	Ursus_maritimus
ENSOARG00000014638	SMARCA1	79	99.675	ENSVPAG00000010492	-	80	99.675	Vicugna_pacos
ENSOARG00000014638	SMARCA1	100	99.184	ENSVVUG00000008878	SMARCA1	99	99.164	Vulpes_vulpes
ENSOARG00000014638	SMARCA1	99	89.694	ENSXETG00000001526	smarca1	98	89.694	Xenopus_tropicalis
ENSOARG00000014638	SMARCA1	99	83.231	ENSXCOG00000011170	smarca5	97	83.231	Xiphophorus_couchianus
ENSOARG00000014638	SMARCA1	99	83.231	ENSXMAG00000009678	smarca5	97	84.649	Xiphophorus_maculatus