EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000015812 (Gene tree)
Gene ID: -
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 122084 bases
Position: chr1:67763667-67885750
Accession: 101123510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000016988	ResIII	PF04851.15	1.6e-11	1	1
ENSOARP00000016988	DEAD	PF00270.29	1.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000017229	HFM1-201	4305	XM_004002187	ENSOARP00000016988	1434 (aa)	-	W5Q2Q0

Gene Model

Click here to download ENSOARG00000015812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000015812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000015812	HFM1	50	35.627	ENSOARG00000011627	ASCC3	61	35.627
ENSOARG00000015812	HFM1	58	31.013	ENSOARG00000013949	SNRNP200	75	31.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000015812	HFM1	100	85.357	ENSG00000162669	HFM1	100	85.357	Homo_sapiens
ENSOARG00000015812	HFM1	58	66.507	ENSAPOG00000005304	hfm1	94	66.507	Acanthochromis_polyacanthus
ENSOARG00000015812	HFM1	100	87.439	ENSAMEG00000000432	HFM1	100	87.439	Ailuropoda_melanoleuca
ENSOARG00000015812	HFM1	73	59.490	ENSACIG00000021553	hfm1	94	59.490	Amphilophus_citrinellus
ENSOARG00000015812	HFM1	58	66.667	ENSAOCG00000022839	hfm1	96	69.105	Amphiprion_ocellaris
ENSOARG00000015812	HFM1	58	66.427	ENSAPEG00000014316	hfm1	96	69.279	Amphiprion_percula
ENSOARG00000015812	HFM1	67	64.463	ENSATEG00000019181	hfm1	80	63.497	Anabas_testudineus
ENSOARG00000015812	HFM1	100	60.397	ENSAPLG00000013639	HFM1	100	60.397	Anas_platyrhynchos
ENSOARG00000015812	HFM1	100	82.500	ENSANAG00000029513	HFM1	100	82.500	Aotus_nancymaae
ENSOARG00000015812	HFM1	70	60.039	ENSACLG00000009033	hfm1	97	65.036	Astatotilapia_calliptera
ENSOARG00000015812	HFM1	92	52.872	ENSAMXG00000006108	hfm1	89	52.798	Astyanax_mexicanus
ENSOARG00000015812	HFM1	100	96.106	ENSBTAG00000020856	HFM1	100	96.106	Bos_taurus
ENSOARG00000015812	HFM1	100	83.969	ENSCJAG00000001843	HFM1	100	83.969	Callithrix_jacchus
ENSOARG00000015812	HFM1	100	86.111	ENSCAFG00000020187	HFM1	100	86.111	Canis_familiaris
ENSOARG00000015812	HFM1	100	82.732	ENSTSYG00000014250	HFM1	100	82.732	Carlito_syrichta
ENSOARG00000015812	HFM1	99	77.832	ENSCPOG00000007421	HFM1	99	77.832	Cavia_porcellus
ENSOARG00000015812	HFM1	100	83.622	ENSCCAG00000033206	HFM1	100	83.622	Cebus_capucinus
ENSOARG00000015812	HFM1	100	84.872	ENSCATG00000030987	HFM1	100	84.872	Cercocebus_atys
ENSOARG00000015812	HFM1	100	78.976	ENSCLAG00000005173	HFM1	99	78.976	Chinchilla_lanigera
ENSOARG00000015812	HFM1	68	89.474	ENSCHOG00000011824	-	77	89.474	Choloepus_hoffmanni
ENSOARG00000015812	HFM1	100	71.862	ENSCGRG00001016995	Hfm1	100	71.862	Cricetulus_griseus_chok1gshd
ENSOARG00000015812	HFM1	100	76.075	ENSCGRG00000017181	Hfm1	100	76.075	Cricetulus_griseus_crigri
ENSOARG00000015812	HFM1	71	59.789	ENSCSEG00000017659	hfm1	94	59.750	Cynoglossus_semilaevis
ENSOARG00000015812	HFM1	50	69.285	ENSCVAG00000005075	hfm1	86	69.285	Cyprinodon_variegatus
ENSOARG00000015812	HFM1	76	56.369	ENSDARG00000104288	hfm1	96	56.369	Danio_rerio
ENSOARG00000015812	HFM1	100	79.731	ENSDNOG00000004776	HFM1	100	79.731	Dasypus_novemcinctus
ENSOARG00000015812	HFM1	100	76.217	ENSDORG00000014661	Hfm1	100	76.217	Dipodomys_ordii
ENSOARG00000015812	HFM1	71	86.081	ENSEASG00005015424	HFM1	97	86.081	Equus_asinus_asinus
ENSOARG00000015812	HFM1	100	85.455	ENSECAG00000024039	HFM1	100	85.455	Equus_caballus
ENSOARG00000015812	HFM1	63	67.728	ENSELUG00000018944	hfm1	97	67.728	Esox_lucius
ENSOARG00000015812	HFM1	100	87.023	ENSFCAG00000029116	HFM1	100	87.023	Felis_catus
ENSOARG00000015812	HFM1	100	60.411	ENSFALG00000001781	HFM1	100	61.019	Ficedula_albicollis
ENSOARG00000015812	HFM1	100	77.934	ENSFDAG00000020816	HFM1	100	77.934	Fukomys_damarensis
ENSOARG00000015812	HFM1	66	60.354	ENSGMOG00000017436	hfm1	100	60.354	Gadus_morhua
ENSOARG00000015812	HFM1	71	62.293	ENSGAFG00000018093	hfm1	94	66.468	Gambusia_affinis
ENSOARG00000015812	HFM1	66	61.707	ENSGACG00000015686	hfm1	99	61.707	Gasterosteus_aculeatus
ENSOARG00000015812	HFM1	100	85.010	ENSGGOG00000038524	HFM1	100	85.010	Gorilla_gorilla
ENSOARG00000015812	HFM1	70	61.455	ENSHBUG00000007309	hfm1	97	60.132	Haplochromis_burtoni
ENSOARG00000015812	HFM1	57	64.338	ENSHCOG00000019632	hfm1	97	64.338	Hippocampus_comes
ENSOARG00000015812	HFM1	65	65.380	ENSIPUG00000017020	hfm1	92	66.350	Ictalurus_punctatus
ENSOARG00000015812	HFM1	100	76.544	ENSJJAG00000017198	Hfm1	100	76.544	Jaculus_jaculus
ENSOARG00000015812	HFM1	62	62.749	ENSKMAG00000002282	hfm1	91	62.749	Kryptolebias_marmoratus
ENSOARG00000015812	HFM1	71	60.136	ENSLBEG00000006759	hfm1	97	65.448	Labrus_bergylta
ENSOARG00000015812	HFM1	66	70.911	ENSLACG00000010698	HFM1	100	66.887	Latimeria_chalumnae
ENSOARG00000015812	HFM1	74	63.458	ENSLOCG00000004931	hfm1	99	63.551	Lepisosteus_oculatus
ENSOARG00000015812	HFM1	52	89.098	ENSLAFG00000015903	-	99	89.098	Loxodonta_africana
ENSOARG00000015812	HFM1	100	82.158	ENSMFAG00000003649	HFM1	100	82.158	Macaca_fascicularis
ENSOARG00000015812	HFM1	100	84.525	ENSMMUG00000006819	HFM1	100	84.525	Macaca_mulatta
ENSOARG00000015812	HFM1	54	70.603	ENSMAMG00000004623	hfm1	97	67.029	Mastacembelus_armatus
ENSOARG00000015812	HFM1	70	60.039	ENSMZEG00005004679	hfm1	97	65.036	Maylandia_zebra
ENSOARG00000015812	HFM1	54	77.551	ENSMGAG00000008437	HFM1	98	77.551	Meleagris_gallopavo
ENSOARG00000015812	HFM1	100	76.161	ENSMAUG00000018858	Hfm1	100	76.161	Mesocricetus_auratus
ENSOARG00000015812	HFM1	100	84.327	ENSMICG00000037935	HFM1	100	84.327	Microcebus_murinus
ENSOARG00000015812	HFM1	100	74.670	ENSMOCG00000014812	Hfm1	100	74.670	Microtus_ochrogaster
ENSOARG00000015812	HFM1	62	64.126	ENSMMOG00000006148	hfm1	96	64.426	Mola_mola
ENSOARG00000015812	HFM1	65	64.775	ENSMALG00000002401	hfm1	94	67.509	Monopterus_albus
ENSOARG00000015812	HFM1	94	70.936	MGP_CAROLIEiJ_G0027496	Hfm1	100	70.936	Mus_caroli
ENSOARG00000015812	HFM1	100	75.087	ENSMUSG00000043410	Hfm1	100	75.087	Mus_musculus
ENSOARG00000015812	HFM1	100	75.156	MGP_PahariEiJ_G0017268	Hfm1	100	75.156	Mus_pahari
ENSOARG00000015812	HFM1	100	74.879	MGP_SPRETEiJ_G0028495	Hfm1	100	74.879	Mus_spretus
ENSOARG00000015812	HFM1	100	83.176	ENSMPUG00000004594	HFM1	100	83.176	Mustela_putorius_furo
ENSOARG00000015812	HFM1	100	83.864	ENSMLUG00000010200	HFM1	100	83.864	Myotis_lucifugus
ENSOARG00000015812	HFM1	70	57.436	ENSNBRG00000002910	hfm1	97	65.333	Neolamprologus_brichardi
ENSOARG00000015812	HFM1	100	80.844	ENSNLEG00000010285	HFM1	100	80.844	Nomascus_leucogenys
ENSOARG00000015812	HFM1	84	68.103	ENSMEUG00000015788	HFM1	84	68.103	Notamacropus_eugenii
ENSOARG00000015812	HFM1	84	75.801	ENSOPRG00000013916	HFM1	84	75.801	Ochotona_princeps
ENSOARG00000015812	HFM1	71	61.509	ENSONIG00000010590	hfm1	99	61.472	Oreochromis_niloticus
ENSOARG00000015812	HFM1	57	65.191	ENSORLG00000026844	hfm1	99	65.191	Oryzias_latipes
ENSOARG00000015812	HFM1	68	55.802	ENSORLG00020002951	hfm1	77	55.802	Oryzias_latipes_hni
ENSOARG00000015812	HFM1	78	55.915	ENSOMEG00000016474	hfm1	95	49.859	Oryzias_melastigma
ENSOARG00000015812	HFM1	86	85.447	ENSOGAG00000032369	HFM1	100	85.447	Otolemur_garnettii
ENSOARG00000015812	HFM1	92	86.521	ENSPPAG00000024582	HFM1	99	86.521	Pan_paniscus
ENSOARG00000015812	HFM1	100	87.300	ENSPPRG00000003270	HFM1	100	87.300	Panthera_pardus
ENSOARG00000015812	HFM1	100	87.162	ENSPTIG00000018881	HFM1	100	87.162	Panthera_tigris_altaica
ENSOARG00000015812	HFM1	100	85.635	ENSPTRG00000000948	HFM1	100	85.635	Pan_troglodytes
ENSOARG00000015812	HFM1	100	84.525	ENSPANG00000009838	HFM1	100	84.525	Papio_anubis
ENSOARG00000015812	HFM1	62	68.090	ENSPKIG00000003810	hfm1	95	68.523	Paramormyrops_kingsleyae
ENSOARG00000015812	HFM1	58	66.022	ENSPMGG00000011059	hfm1	100	66.022	Periophthalmus_magnuspinnatus
ENSOARG00000015812	HFM1	100	78.001	ENSPEMG00000022852	Hfm1	100	78.001	Peromyscus_maniculatus_bairdii
ENSOARG00000015812	HFM1	100	66.979	ENSPCIG00000014233	HFM1	100	66.979	Phascolarctos_cinereus
ENSOARG00000015812	HFM1	71	62.298	ENSPFOG00000017194	hfm1	99	62.298	Poecilia_formosa
ENSOARG00000015812	HFM1	71	64.098	ENSPLAG00000000571	hfm1	92	64.098	Poecilia_latipinna
ENSOARG00000015812	HFM1	71	63.450	ENSPMEG00000019475	hfm1	92	63.450	Poecilia_mexicana
ENSOARG00000015812	HFM1	71	63.189	ENSPREG00000007803	hfm1	94	66.069	Poecilia_reticulata
ENSOARG00000015812	HFM1	100	85.080	ENSPPYG00000001163	HFM1	100	85.080	Pongo_abelii
ENSOARG00000015812	HFM1	70	81.166	ENSPCAG00000004289	-	70	81.166	Procavia_capensis
ENSOARG00000015812	HFM1	100	77.793	ENSPVAG00000009713	HFM1	100	77.793	Pteropus_vampyrus
ENSOARG00000015812	HFM1	70	60.374	ENSPNYG00000001795	hfm1	97	65.036	Pundamilia_nyererei
ENSOARG00000015812	HFM1	59	68.000	ENSPNAG00000010865	hfm1	84	68.000	Pygocentrus_nattereri
ENSOARG00000015812	HFM1	100	74.393	ENSRNOG00000023299	Hfm1	100	74.393	Rattus_norvegicus
ENSOARG00000015812	HFM1	100	84.525	ENSRROG00000045569	HFM1	100	84.525	Rhinopithecus_roxellana
ENSOARG00000015812	HFM1	100	82.823	ENSSBOG00000027456	HFM1	100	82.823	Saimiri_boliviensis_boliviensis
ENSOARG00000015812	HFM1	60	72.203	ENSSHAG00000014616	-	98	72.203	Sarcophilus_harrisii
ENSOARG00000015812	HFM1	100	50.096	ENSSFOG00015020129	hfm1	100	50.161	Scleropages_formosus
ENSOARG00000015812	HFM1	62	65.140	ENSSMAG00000006907	hfm1	87	65.140	Scophthalmus_maximus
ENSOARG00000015812	HFM1	58	66.626	ENSSDUG00000011424	hfm1	93	66.626	Seriola_dumerili
ENSOARG00000015812	HFM1	63	66.747	ENSSLDG00000016386	hfm1	100	66.747	Seriola_lalandi_dorsalis
ENSOARG00000015812	HFM1	69	58.669	ENSSPAG00000001023	hfm1	96	65.233	Stegastes_partitus
ENSOARG00000015812	HFM1	100	84.595	ENSSSCG00000006912	HFM1	100	84.595	Sus_scrofa
ENSOARG00000015812	HFM1	66	75.444	ENSTGUG00000006172	HFM1	100	75.444	Taeniopygia_guttata
ENSOARG00000015812	HFM1	100	84.519	ENSTTRG00000013933	HFM1	100	84.519	Tursiops_truncatus
ENSOARG00000015812	HFM1	93	86.745	ENSVPAG00000011331	HFM1	93	86.745	Vicugna_pacos
ENSOARG00000015812	HFM1	71	83.430	ENSVVUG00000020760	HFM1	99	83.430	Vulpes_vulpes
ENSOARG00000015812	HFM1	58	66.906	ENSXMAG00000004178	hfm1	93	66.906	Xiphophorus_maculatus