EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOARG00000016235 (Gene tree)
Gene ID
-
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Ovis_aries
Status
putative
Strand
Plus strand
Length
5538 bases
Position
chr9:13918448-13923985
Accession
101112401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOARP00000017436RRM_1PF00076.226.9e-4412
ENSOARP00000017436RRM_1PF00076.226.9e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOART00000017683PUF60-2011557XM_004011591ENSOARP00000017436518 (aa)-W5Q3Z7
Gene Model
Click here to download ENSOARG00000016235's gene model file
Pathways
Pathway IDPathway NameSource
oas03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000016235's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOARG00000016235PUF605036.275ENSOARG00000001091U2AF26138.235
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOARG00000016235PUF609996.750ENSG00000179950PUF6010096.705Homo_sapiens
ENSOARG00000016235PUF609983.523ENSAPOG00000001713puf60b9983.588Acanthochromis_polyacanthus
ENSOARG00000016235PUF609995.946ENSAMEG00000006406PUF609495.946Ailuropoda_melanoleuca
ENSOARG00000016235PUF609775.676ENSACIG00000003263-9976.108Amphilophus_citrinellus
ENSOARG00000016235PUF609783.977ENSACIG00000021705puf60b10083.977Amphilophus_citrinellus
ENSOARG00000016235PUF609883.588ENSAOCG00000005395puf60b10084.363Amphiprion_ocellaris
ENSOARG00000016235PUF609879.924ENSAOCG00000015558-9980.306Amphiprion_ocellaris
ENSOARG00000016235PUF609771.984ENSAPEG00000001836-9973.462Amphiprion_percula
ENSOARG00000016235PUF609979.008ENSAPEG00000011923puf60b9979.008Amphiprion_percula
ENSOARG00000016235PUF609983.554ENSATEG00000001730puf60b9983.554Anabas_testudineus
ENSOARG00000016235PUF609879.502ENSATEG00000006303-9979.693Anabas_testudineus
ENSOARG00000016235PUF609895.785ENSAPLG00000010150PUF6010095.785Anas_platyrhynchos
ENSOARG00000016235PUF609893.893ENSACAG00000001645PUF609793.893Anolis_carolinensis
ENSOARG00000016235PUF609996.750ENSANAG00000018626PUF6010096.705Aotus_nancymaae
ENSOARG00000016235PUF609783.977ENSACLG00000004462puf60b10083.977Astatotilapia_calliptera
ENSOARG00000016235PUF609882.143ENSAMXG00000036570puf60a10079.342Astyanax_mexicanus
ENSOARG00000016235PUF609775.188ENSAMXG00000041030puf60b10074.667Astyanax_mexicanus
ENSOARG00000016235PUF609997.514ENSBTAG00000037493PUF609997.328Bos_taurus
ENSOARG00000016235PUF607950.338WBGene00004389rnp-67153.307Caenorhabditis_elegans
ENSOARG00000016235PUF609996.941ENSCJAG00000021485PUF609896.935Callithrix_jacchus
ENSOARG00000016235PUF609996.750ENSCAFG00000001400PUF609396.750Canis_familiaris
ENSOARG00000016235PUF609997.132ENSCAFG00020018754PUF609897.126Canis_lupus_dingo
ENSOARG00000016235PUF609997.514ENSCHIG00000001618PUF608797.514Capra_hircus
ENSOARG00000016235PUF609996.941ENSTSYG00000011912PUF6010097.093Carlito_syrichta
ENSOARG00000016235PUF609991.082ENSCPOG00000014613PUF609491.082Cavia_porcellus
ENSOARG00000016235PUF609996.750ENSCCAG00000007744PUF609896.743Cebus_capucinus
ENSOARG00000016235PUF609996.750ENSCATG00000035405PUF609896.743Cercocebus_atys
ENSOARG00000016235PUF609997.132ENSCLAG00000009154PUF609397.132Chinchilla_lanigera
ENSOARG00000016235PUF609796.705ENSCSAG00000008878PUF6010096.705Chlorocebus_sabaeus
ENSOARG00000016235PUF609895.785ENSCPBG00000005595PUF609895.785Chrysemys_picta_bellii
ENSOARG00000016235PUF609849.146ENSCING00000008436-9849.710Ciona_intestinalis
ENSOARG00000016235PUF606158.806ENSCING00000002156-8755.556Ciona_intestinalis
ENSOARG00000016235PUF609550.704ENSCSAVG00000004765-9750.303Ciona_savignyi
ENSOARG00000016235PUF609553.654ENSCSAVG00000001385-9954.054Ciona_savignyi
ENSOARG00000016235PUF607896.163ENSCANG00000041843PUF6010096.163Colobus_angolensis_palliatus
ENSOARG00000016235PUF609996.367ENSCGRG00001017442Puf609396.367Cricetulus_griseus_chok1gshd
ENSOARG00000016235PUF609996.367ENSCGRG00000003717Puf609396.367Cricetulus_griseus_crigri
ENSOARG00000016235PUF609970.510ENSCSEG00000014845-9172.433Cynoglossus_semilaevis
ENSOARG00000016235PUF609982.243ENSCSEG00000019887puf60b9482.056Cynoglossus_semilaevis
ENSOARG00000016235PUF609783.109ENSCVAG00000009386puf60b10084.261Cyprinodon_variegatus
ENSOARG00000016235PUF608978.390ENSCVAG00000001560-9876.596Cyprinodon_variegatus
ENSOARG00000016235PUF609785.115ENSDARG00000032175puf60a9991.915Danio_rerio
ENSOARG00000016235PUF609777.505ENSDARG00000001241puf60b9993.651Danio_rerio
ENSOARG00000016235PUF609681.657ENSDNOG00000043278PUF609081.657Dasypus_novemcinctus
ENSOARG00000016235PUF609996.941ENSDORG00000004585Puf609596.941Dipodomys_ordii
ENSOARG00000016235PUF609548.616FBgn0028577hfp9943.627Drosophila_melanogaster
ENSOARG00000016235PUF609569.618ENSEBUG00000005470-8869.355Eptatretus_burgeri
ENSOARG00000016235PUF609863.158ENSEBUG00000014291puf60b8462.906Eptatretus_burgeri
ENSOARG00000016235PUF609997.132ENSEASG00005009695PUF609897.126Equus_asinus_asinus
ENSOARG00000016235PUF609997.132ENSECAG00000024681PUF609896.212Equus_caballus
ENSOARG00000016235PUF609981.784ENSELUG00000006507puf60b9581.698Esox_lucius
ENSOARG00000016235PUF609883.429ENSELUG00000018443-9883.429Esox_lucius
ENSOARG00000016235PUF609996.941ENSFCAG00000001045PUF6010096.899Felis_catus
ENSOARG00000016235PUF609882.950ENSFALG00000001136PUF609884.100Ficedula_albicollis
ENSOARG00000016235PUF609996.750ENSFDAG00000017177PUF609396.750Fukomys_damarensis
ENSOARG00000016235PUF609981.853ENSFHEG00000020046puf60b10084.556Fundulus_heteroclitus
ENSOARG00000016235PUF609377.778ENSFHEG00000021687PUF6010078.395Fundulus_heteroclitus
ENSOARG00000016235PUF609871.429ENSGMOG00000006392puf60b10070.667Gadus_morhua
ENSOARG00000016235PUF606494.477ENSGALG00000039901PUF609494.477Gallus_gallus
ENSOARG00000016235PUF609881.870ENSGAFG00000021040puf60b10083.977Gambusia_affinis
ENSOARG00000016235PUF609778.058ENSGAFG00000004334-9976.070Gambusia_affinis
ENSOARG00000016235PUF609872.053ENSGACG00000004717puf60b9871.374Gasterosteus_aculeatus
ENSOARG00000016235PUF609869.515ENSGACG00000001484-10068.738Gasterosteus_aculeatus
ENSOARG00000016235PUF609895.785ENSGAGG00000013289PUF609295.785Gopherus_agassizii
ENSOARG00000016235PUF609996.750ENSGGOG00000004646PUF609896.743Gorilla_gorilla
ENSOARG00000016235PUF609880.153ENSHBUG00000009634-10079.377Haplochromis_burtoni
ENSOARG00000016235PUF609883.206ENSHBUG00000015118puf60b10083.977Haplochromis_burtoni
ENSOARG00000016235PUF609996.750ENSHGLG00000006111PUF609396.750Heterocephalus_glaber_female
ENSOARG00000016235PUF609996.750ENSHGLG00100012362PUF609396.750Heterocephalus_glaber_male
ENSOARG00000016235PUF609666.467ENSHCOG00000000378-9963.429Hippocampus_comes
ENSOARG00000016235PUF609879.444ENSHCOG00000015541puf60b10077.551Hippocampus_comes
ENSOARG00000016235PUF609780.228ENSIPUG00000002453puf60a9980.608Ictalurus_punctatus
ENSOARG00000016235PUF609777.127ENSIPUG00000004660puf60b9976.894Ictalurus_punctatus
ENSOARG00000016235PUF609997.132ENSSTOG00000025037PUF609497.132Ictidomys_tridecemlineatus
ENSOARG00000016235PUF609996.750ENSJJAG00000001076Puf609396.750Jaculus_jaculus
ENSOARG00000016235PUF609783.398ENSKMAG00000016745puf60b10084.556Kryptolebias_marmoratus
ENSOARG00000016235PUF609777.524ENSKMAG00000010106-10076.775Kryptolebias_marmoratus
ENSOARG00000016235PUF609883.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSOARG00000016235PUF606788.547ENSLACG00000005456PUF609888.268Latimeria_chalumnae
ENSOARG00000016235PUF609988.337ENSLOCG00000010106puf60b9987.356Lepisosteus_oculatus
ENSOARG00000016235PUF609995.602ENSLAFG00000022929PUF609495.602Loxodonta_africana
ENSOARG00000016235PUF609996.750ENSMFAG00000043373PUF609996.205Macaca_fascicularis
ENSOARG00000016235PUF609996.750ENSMMUG00000013558PUF609896.743Macaca_mulatta
ENSOARG00000016235PUF609996.750ENSMNEG00000031099PUF609896.743Macaca_nemestrina
ENSOARG00000016235PUF609796.705ENSMLEG00000040009PUF6010096.705Mandrillus_leucophaeus
ENSOARG00000016235PUF609881.107ENSMAMG00000019476-9980.344Mastacembelus_armatus
ENSOARG00000016235PUF609883.206ENSMAMG00000010394puf60b9981.041Mastacembelus_armatus
ENSOARG00000016235PUF609783.977ENSMZEG00005018515puf60b10083.977Maylandia_zebra
ENSOARG00000016235PUF609880.344ENSMZEG00005019425-9980.344Maylandia_zebra
ENSOARG00000016235PUF609995.066ENSMGAG00000013070PUF609995.066Meleagris_gallopavo
ENSOARG00000016235PUF609380.204ENSMAUG00000018549-9579.592Mesocricetus_auratus
ENSOARG00000016235PUF606995.368ENSMAUG00000014267-9095.368Mesocricetus_auratus
ENSOARG00000016235PUF609997.132ENSMICG00000012226PUF609997.126Microcebus_murinus
ENSOARG00000016235PUF609996.558ENSMOCG00000018780Puf609496.558Microtus_ochrogaster
ENSOARG00000016235PUF609973.062ENSMMOG00000018059-10076.212Mola_mola
ENSOARG00000016235PUF609784.170ENSMMOG00000004217puf60b10084.170Mola_mola
ENSOARG00000016235PUF609996.558ENSMODG00000009161PUF609596.558Monodelphis_domestica
ENSOARG00000016235PUF609977.586ENSMALG00000006797puf60b9977.586Monopterus_albus
ENSOARG00000016235PUF609878.967ENSMALG00000000200-9977.947Monopterus_albus
ENSOARG00000016235PUF609996.367MGP_CAROLIEiJ_G0019910Puf609396.367Mus_caroli
ENSOARG00000016235PUF609996.367ENSMUSG00000002524Puf609396.367Mus_musculus
ENSOARG00000016235PUF609996.367MGP_PahariEiJ_G0019920Puf609396.367Mus_pahari
ENSOARG00000016235PUF609996.367MGP_SPRETEiJ_G0020812Puf609396.367Mus_spretus
ENSOARG00000016235PUF609997.132ENSMPUG00000008137PUF609397.132Mustela_putorius_furo
ENSOARG00000016235PUF609890.734ENSMLUG00000013032-9890.734Myotis_lucifugus
ENSOARG00000016235PUF609996.176ENSMLUG00000000238-9496.176Myotis_lucifugus
ENSOARG00000016235PUF609996.750ENSNGAG00000000712Puf6010096.705Nannospalax_galili
ENSOARG00000016235PUF609880.806ENSNBRG00000017223-9980.497Neolamprologus_brichardi
ENSOARG00000016235PUF607982.464ENSNBRG00000013047puf60b9782.464Neolamprologus_brichardi
ENSOARG00000016235PUF609996.750ENSNLEG00000002156PUF609896.743Nomascus_leucogenys
ENSOARG00000016235PUF607396.246ENSOPRG00000002147PUF607596.246Ochotona_princeps
ENSOARG00000016235PUF6071100.000ENSODEG00000014024-90100.000Octodon_degus
ENSOARG00000016235PUF609572.709ENSODEG00000015513-9672.852Octodon_degus
ENSOARG00000016235PUF609983.144ENSONIG00000006247puf60b9983.144Oreochromis_niloticus
ENSOARG00000016235PUF609980.418ENSONIG00000014030-9980.418Oreochromis_niloticus
ENSOARG00000016235PUF609678.373ENSOANG00000006962PUF609977.976Ornithorhynchus_anatinus
ENSOARG00000016235PUF609777.524ENSORLG00000028655-9976.437Oryzias_latipes
ENSOARG00000016235PUF609883.206ENSORLG00000012279puf60b10083.398Oryzias_latipes
ENSOARG00000016235PUF609883.206ENSORLG00020007333puf6010083.398Oryzias_latipes_hni
ENSOARG00000016235PUF609877.419ENSORLG00020018144-9876.336Oryzias_latipes_hni
ENSOARG00000016235PUF609882.319ENSORLG00015007718puf60b10083.269Oryzias_latipes_hsok
ENSOARG00000016235PUF609877.672ENSORLG00015016833-9876.583Oryzias_latipes_hsok
ENSOARG00000016235PUF609978.261ENSOMEG00000022185-9877.159Oryzias_melastigma
ENSOARG00000016235PUF609878.505ENSOMEG00000001643puf60b9981.301Oryzias_melastigma
ENSOARG00000016235PUF609997.132ENSOGAG00000006259PUF609497.132Otolemur_garnettii
ENSOARG00000016235PUF609996.750ENSPPAG00000029933PUF609896.743Pan_paniscus
ENSOARG00000016235PUF609996.941ENSPPRG00000003257PUF6010096.899Panthera_pardus
ENSOARG00000016235PUF609994.798ENSPTIG00000009795PUF609994.818Panthera_tigris_altaica
ENSOARG00000016235PUF609996.558ENSPTRG00000020670PUF609896.552Pan_troglodytes
ENSOARG00000016235PUF609996.558ENSPTRG00000043963-9896.552Pan_troglodytes
ENSOARG00000016235PUF609996.750ENSPANG00000021936PUF609896.743Papio_anubis
ENSOARG00000016235PUF609884.030ENSPKIG00000004295puf60a9989.614Paramormyrops_kingsleyae
ENSOARG00000016235PUF609885.851ENSPKIG00000012204puf60b10086.654Paramormyrops_kingsleyae
ENSOARG00000016235PUF609995.420ENSPSIG00000004679PUF609995.420Pelodiscus_sinensis
ENSOARG00000016235PUF609783.109ENSPMGG00000013444puf60b9982.726Periophthalmus_magnuspinnatus
ENSOARG00000016235PUF609996.558ENSPEMG00000008820Puf609396.558Peromyscus_maniculatus_bairdii
ENSOARG00000016235PUF609997.132ENSPCIG00000020270PUF609996.929Phascolarctos_cinereus
ENSOARG00000016235PUF609878.927ENSPFOG00000011118-9977.885Poecilia_formosa
ENSOARG00000016235PUF609882.634ENSPFOG00000019217puf60b9981.418Poecilia_formosa
ENSOARG00000016235PUF609783.398ENSPLAG00000010754puf60b10084.556Poecilia_latipinna
ENSOARG00000016235PUF609878.736ENSPLAG00000017025-9177.308Poecilia_latipinna
ENSOARG00000016235PUF609878.736ENSPMEG00000009767-9078.405Poecilia_mexicana
ENSOARG00000016235PUF609882.634ENSPMEG00000000838puf60b10084.556Poecilia_mexicana
ENSOARG00000016235PUF609978.085ENSPREG00000005440puf60b10080.545Poecilia_reticulata
ENSOARG00000016235PUF607894.484ENSPPYG00000018951-9594.484Pongo_abelii
ENSOARG00000016235PUF607896.403ENSPCAG00000014837PUF6010096.403Procavia_capensis
ENSOARG00000016235PUF609996.941ENSPCOG00000027981PUF609996.935Propithecus_coquereli
ENSOARG00000016235PUF609796.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSOARG00000016235PUF609783.977ENSPNYG00000002556puf60b10083.977Pundamilia_nyererei
ENSOARG00000016235PUF609880.344ENSPNYG00000004273-9980.344Pundamilia_nyererei
ENSOARG00000016235PUF609881.190ENSPNAG00000019909puf60a9981.034Pygocentrus_nattereri
ENSOARG00000016235PUF609877.176ENSPNAG00000019415puf60b9075.882Pygocentrus_nattereri
ENSOARG00000016235PUF609996.367ENSRNOG00000009960Puf609396.367Rattus_norvegicus
ENSOARG00000016235PUF609996.750ENSRBIG00000035274PUF609896.743Rhinopithecus_bieti
ENSOARG00000016235PUF609996.750ENSRROG00000029360PUF609996.743Rhinopithecus_roxellana
ENSOARG00000016235PUF609996.718ENSSBOG00000027089PUF609995.429Saimiri_boliviensis_boliviensis
ENSOARG00000016235PUF608996.178ENSSHAG00000006668PUF609096.178Sarcophilus_harrisii
ENSOARG00000016235PUF609879.235ENSSFOG00015019371puf60a9885.425Scleropages_formosus
ENSOARG00000016235PUF609780.688ENSSFOG00015019619puf60b9984.521Scleropages_formosus
ENSOARG00000016235PUF607291.071ENSSMAG00000016381puf60b7291.636Scophthalmus_maximus
ENSOARG00000016235PUF609879.626ENSSDUG00000009935puf60b9982.520Seriola_dumerili
ENSOARG00000016235PUF609878.695ENSSDUG00000007048-9878.695Seriola_dumerili
ENSOARG00000016235PUF609779.191ENSSLDG00000007366-9979.423Seriola_lalandi_dorsalis
ENSOARG00000016235PUF609883.939ENSSLDG00000024011puf60b9683.939Seriola_lalandi_dorsalis
ENSOARG00000016235PUF606482.456ENSSPUG00000013518PUF609482.456Sphenodon_punctatus
ENSOARG00000016235PUF609780.422ENSSPAG00000020285-10080.806Stegastes_partitus
ENSOARG00000016235PUF609879.740ENSSPAG00000012144puf60b10079.511Stegastes_partitus
ENSOARG00000016235PUF609996.941ENSSSCG00000038800PUF609894.981Sus_scrofa
ENSOARG00000016235PUF609892.337ENSTGUG00000012797-10092.337Taeniopygia_guttata
ENSOARG00000016235PUF609776.621ENSTRUG00000008843-10076.621Takifugu_rubripes
ENSOARG00000016235PUF609982.231ENSTRUG00000005420puf60b10078.571Takifugu_rubripes
ENSOARG00000016235PUF609982.667ENSTNIG00000013675puf60b10082.667Tetraodon_nigroviridis
ENSOARG00000016235PUF609976.154ENSTNIG00000003069-10076.538Tetraodon_nigroviridis
ENSOARG00000016235PUF605593.127ENSTBEG00000002751-9793.103Tupaia_belangeri
ENSOARG00000016235PUF607880.938ENSTBEG00000001899-10081.232Tupaia_belangeri
ENSOARG00000016235PUF609796.505ENSTTRG00000017088PUF6010096.505Tursiops_truncatus
ENSOARG00000016235PUF609997.132ENSUAMG00000024917PUF609897.126Ursus_americanus
ENSOARG00000016235PUF609992.500ENSUMAG00000000272PUF609492.500Ursus_maritimus
ENSOARG00000016235PUF609997.132ENSVVUG00000022527PUF6010097.093Vulpes_vulpes
ENSOARG00000016235PUF609891.923ENSXETG00000012469puf609891.923Xenopus_tropicalis
ENSOARG00000016235PUF609781.128ENSXCOG00000012355puf60b10082.296Xiphophorus_couchianus
ENSOARG00000016235PUF609882.634ENSXMAG00000001862puf60b10084.556Xiphophorus_maculatus
ENSOARG00000016235PUF609977.413ENSXMAG00000010507-9975.242Xiphophorus_maculatus

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