EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000016290 (Gene tree)
Gene ID: 100037691
Gene Symbol: APOBEC3F
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide-like 3F
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 17389 bases
Position: chr3:214539947-214557335
Accession: 100037691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000017500	APOBEC_N	PF08210.11	2.1e-89	1	2
ENSOARP00000017500	APOBEC_N	PF08210.11	2.1e-89	2	2
ENSOARP00000017500	APOBEC_C	PF05240.14	5.1e-64	1	2
ENSOARP00000017500	APOBEC_C	PF05240.14	5.1e-64	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000017747	-	3952	-	ENSOARP00000017500	372 (aa)	-	B7TA00

Gene Model

Click here to download ENSOARG00000016290's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000016290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000016290	APOBEC3F	97	40.741	ENSOARG00000016213	APOBEC3Z1	100	40.741
ENSOARG00000016290	APOBEC3F	60	38.614	ENSOARG00000002072	APOBEC1	52	38.614
ENSOARG00000016290	APOBEC3F	94	41.808	ENSOARG00000001982	AICDA	89	41.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000016290	APOBEC3F	96	49.444	ENSG00000100298	APOBEC3H	99	49.444	Homo_sapiens
ENSOARG00000016290	APOBEC3F	100	46.226	ENSAMEG00000010818	-	95	46.226	Ailuropoda_melanoleuca
ENSOARG00000016290	APOBEC3F	95	49.215	ENSANAG00000025410	APOBEC3H	93	49.215	Aotus_nancymaae
ENSOARG00000016290	APOBEC3F	99	83.690	ENSBTAG00000007755	APOBEC3H	97	83.690	Bos_taurus
ENSOARG00000016290	APOBEC3F	92	49.444	ENSCJAG00000012524	APOBEC3H	90	49.444	Callithrix_jacchus
ENSOARG00000016290	APOBEC3F	96	58.757	ENSCAFG00000001361	APOBEC3Z3	95	58.757	Canis_familiaris
ENSOARG00000016290	APOBEC3F	97	56.906	ENSCAFG00020002584	-	94	56.906	Canis_lupus_dingo
ENSOARG00000016290	APOBEC3F	99	96.216	ENSCHIG00000026580	-	99	96.216	Capra_hircus
ENSOARG00000016290	APOBEC3F	91	54.023	ENSTSYG00000032894	-	100	54.023	Carlito_syrichta
ENSOARG00000016290	APOBEC3F	96	46.629	ENSCPOG00000009257	-	85	46.629	Cavia_porcellus
ENSOARG00000016290	APOBEC3F	93	49.198	ENSCCAG00000008525	APOBEC3H	90	49.727	Cebus_capucinus
ENSOARG00000016290	APOBEC3F	96	50.556	ENSCATG00000030302	APOBEC3H	99	50.556	Cercocebus_atys
ENSOARG00000016290	APOBEC3F	95	54.237	ENSCLAG00000016615	-	88	54.237	Chinchilla_lanigera
ENSOARG00000016290	APOBEC3F	97	50.000	ENSCSAG00000006371	APOBEC3H	94	50.000	Chlorocebus_sabaeus
ENSOARG00000016290	APOBEC3F	98	47.027	ENSCGRG00001022976	Apobec3	88	47.027	Cricetulus_griseus_chok1gshd
ENSOARG00000016290	APOBEC3F	98	47.027	ENSCGRG00000005621	Apobec3	88	47.027	Cricetulus_griseus_crigri
ENSOARG00000016290	APOBEC3F	98	48.603	ENSDORG00000027271	-	100	53.061	Dipodomys_ordii
ENSOARG00000016290	APOBEC3F	97	59.563	ENSECAG00000007726	APOBEC3H	81	59.563	Equus_caballus
ENSOARG00000016290	APOBEC3F	94	62.360	ENSFCAG00000005251	APOBEC3Z3	100	62.360	Felis_catus
ENSOARG00000016290	APOBEC3F	96	51.955	ENSSTOG00000007125	-	87	51.955	Ictidomys_tridecemlineatus
ENSOARG00000016290	APOBEC3F	97	46.395	ENSJJAG00000016840	-	83	46.395	Jaculus_jaculus
ENSOARG00000016290	APOBEC3F	97	49.162	ENSLAFG00000027404	-	96	49.162	Loxodonta_africana
ENSOARG00000016290	APOBEC3F	97	52.222	ENSMFAG00000031827	APOBEC3H	94	52.222	Macaca_fascicularis
ENSOARG00000016290	APOBEC3F	97	51.111	ENSMMUG00000001016	APOBEC3H	94	51.111	Macaca_mulatta
ENSOARG00000016290	APOBEC3F	97	51.667	ENSMNEG00000039259	APOBEC3H	94	51.667	Macaca_nemestrina
ENSOARG00000016290	APOBEC3F	97	50.556	ENSMLEG00000033417	APOBEC3H	94	50.556	Mandrillus_leucophaeus
ENSOARG00000016290	APOBEC3F	98	46.092	ENSMAUG00000011683	Apobec3	90	46.092	Mesocricetus_auratus
ENSOARG00000016290	APOBEC3F	97	44.595	ENSMOCG00000021576	Apobec3	91	44.385	Microtus_ochrogaster
ENSOARG00000016290	APOBEC3F	95	47.212	MGP_CAROLIEiJ_G0020029	Apobec3	98	53.012	Mus_caroli
ENSOARG00000016290	APOBEC3F	95	47.778	ENSMUSG00000009585	Apobec3	98	51.807	Mus_musculus
ENSOARG00000016290	APOBEC3F	98	45.580	MGP_PahariEiJ_G0020031	-	89	45.580	Mus_pahari
ENSOARG00000016290	APOBEC3F	96	46.133	MGP_SPRETEiJ_G0020927	Apobec3	98	53.012	Mus_spretus
ENSOARG00000016290	APOBEC3F	98	53.279	ENSMPUG00000013239	-	97	53.279	Mustela_putorius_furo
ENSOARG00000016290	APOBEC3F	97	50.542	ENSNGAG00000018998	Apobec3	99	50.542	Nannospalax_galili
ENSOARG00000016290	APOBEC3F	97	50.000	ENSNLEG00000015218	-	94	50.000	Nomascus_leucogenys
ENSOARG00000016290	APOBEC3F	98	44.505	ENSOCUG00000023913	-	91	44.505	Oryctolagus_cuniculus
ENSOARG00000016290	APOBEC3F	96	48.889	ENSPPAG00000036522	APOBEC3H	98	48.889	Pan_paniscus
ENSOARG00000016290	APOBEC3F	97	51.381	ENSPPRG00000003675	-	95	51.381	Panthera_pardus
ENSOARG00000016290	APOBEC3F	97	63.687	ENSPPRG00000003941	-	95	63.687	Panthera_pardus
ENSOARG00000016290	APOBEC3F	97	63.687	ENSPTIG00000010283	-	95	63.687	Panthera_tigris_altaica
ENSOARG00000016290	APOBEC3F	96	48.889	ENSPTRG00000014390	APOBEC3H	98	48.889	Pan_troglodytes
ENSOARG00000016290	APOBEC3F	97	50.556	ENSPANG00000010774	APOBEC3H	94	50.556	Papio_anubis
ENSOARG00000016290	APOBEC3F	97	43.669	ENSPEMG00000000456	Apobec3	88	43.669	Peromyscus_maniculatus_bairdii
ENSOARG00000016290	APOBEC3F	97	48.333	ENSPPYG00000011834	-	94	48.333	Pongo_abelii
ENSOARG00000016290	APOBEC3F	90	49.432	ENSPCAG00000015655	-	99	49.432	Procavia_capensis
ENSOARG00000016290	APOBEC3F	70	51.145	ENSPVAG00000024267	-	99	51.145	Pteropus_vampyrus
ENSOARG00000016290	APOBEC3F	91	58.523	ENSPVAG00000009462	-	99	58.523	Pteropus_vampyrus
ENSOARG00000016290	APOBEC3F	67	53.226	ENSPVAG00000024161	-	94	53.226	Pteropus_vampyrus
ENSOARG00000016290	APOBEC3F	98	45.699	ENSRNOG00000016852	Apobec3	92	45.699	Rattus_norvegicus
ENSOARG00000016290	APOBEC3F	97	50.000	ENSRBIG00000029088	APOBEC3H	99	50.000	Rhinopithecus_bieti
ENSOARG00000016290	APOBEC3F	97	50.556	ENSRROG00000024699	APOBEC3H	94	50.556	Rhinopithecus_roxellana
ENSOARG00000016290	APOBEC3F	96	50.000	ENSSBOG00000030005	APOBEC3H	99	50.000	Saimiri_boliviensis_boliviensis
ENSOARG00000016290	APOBEC3F	91	70.950	ENSSSCG00000000091	APOBEC3B	77	70.950	Sus_scrofa
ENSOARG00000016290	APOBEC3F	88	55.882	ENSTBEG00000001532	-	99	55.882	Tupaia_belangeri
ENSOARG00000016290	APOBEC3F	91	78.090	ENSTTRG00000001266	-	100	78.090	Tursiops_truncatus
ENSOARG00000016290	APOBEC3F	96	56.216	ENSUAMG00000004427	-	84	56.216	Ursus_americanus
ENSOARG00000016290	APOBEC3F	97	58.011	ENSUMAG00000014435	-	95	57.778	Ursus_maritimus
ENSOARG00000016290	APOBEC3F	67	65.354	ENSVPAG00000011108	-	99	65.354	Vicugna_pacos
ENSOARG00000016290	APOBEC3F	96	74.359	ENSVVUG00000014624	-	68	74.359	Vulpes_vulpes