EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000016579 (Gene tree)
Gene ID: 101122058
Gene Symbol: -
Alias: -
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 50960 bases
Position: chr18:60046889-60097848
Accession: 101122058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000017814	PAP_RNA-bind	PF04926.15	5e-23	1	1
ENSOARP00000017817	PAP_RNA-bind	PF04926.15	5.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000018065	-	2220	XM_004017986	ENSOARP00000017814	739 (aa)	XP_004018035	W5Q524
ENSOART00000018068	-	2268	-	ENSOARP00000017817	755 (aa)	-	W5Q527

Gene Model

Click here to download ENSOARG00000016579's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000016579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000016579	-	98	60.324	ENSOARG00000001563	PAPOLG	89	60.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000016579	-	100	97.450	ENSG00000090060	PAPOLA	100	97.450	Homo_sapiens
ENSOARG00000016579	-	99	98.103	ENSAMEG00000014142	PAPOLA	99	98.106	Ailuropoda_melanoleuca
ENSOARG00000016579	-	99	91.192	ENSAPLG00000006645	PAPOLA	99	90.786	Anas_platyrhynchos
ENSOARG00000016579	-	99	92.152	ENSACAG00000013474	PAPOLA	99	95.448	Anolis_carolinensis
ENSOARG00000016579	-	72	91.386	ENSANAG00000027941	-	98	91.386	Aotus_nancymaae
ENSOARG00000016579	-	100	97.181	ENSANAG00000018274	PAPOLA	99	98.897	Aotus_nancymaae
ENSOARG00000016579	-	100	71.102	ENSAMXG00000018141	papola	99	84.919	Astyanax_mexicanus
ENSOARG00000016579	-	100	99.459	ENSBTAG00000004054	PAPOLA	100	99.459	Bos_taurus
ENSOARG00000016579	-	100	97.181	ENSCJAG00000006512	PAPOLA	99	98.897	Callithrix_jacchus
ENSOARG00000016579	-	100	97.718	ENSCAFG00000017783	PAPOLA	100	97.718	Canis_familiaris
ENSOARG00000016579	-	100	98.241	ENSCAFG00020011550	PAPOLA	100	98.241	Canis_lupus_dingo
ENSOARG00000016579	-	100	99.459	ENSCHIG00000025004	-	100	99.459	Capra_hircus
ENSOARG00000016579	-	99	97.554	ENSTSYG00000012384	PAPOLA	99	97.554	Carlito_syrichta
ENSOARG00000016579	-	100	93.099	ENSCPOG00000002648	PAPOLA	100	93.099	Cavia_porcellus
ENSOARG00000016579	-	100	97.315	ENSCCAG00000025120	PAPOLA	100	97.315	Cebus_capucinus
ENSOARG00000016579	-	100	97.450	ENSCATG00000018815	PAPOLA	99	99.255	Cercocebus_atys
ENSOARG00000016579	-	100	97.023	ENSCLAG00000016342	PAPOLA	100	97.023	Chinchilla_lanigera
ENSOARG00000016579	-	100	97.450	ENSCSAG00000010516	PAPOLA	100	97.450	Chlorocebus_sabaeus
ENSOARG00000016579	-	72	83.924	ENSCHOG00000001115	PAPOLA	72	83.924	Choloepus_hoffmanni
ENSOARG00000016579	-	100	93.108	ENSCPBG00000024125	PAPOLA	100	93.108	Chrysemys_picta_bellii
ENSOARG00000016579	-	99	92.194	ENSCANG00000000159	PAPOLA	100	92.194	Colobus_angolensis_palliatus
ENSOARG00000016579	-	100	88.363	ENSCGRG00001000229	-	99	89.871	Cricetulus_griseus_chok1gshd
ENSOARG00000016579	-	99	84.553	ENSCGRG00001002732	-	99	84.553	Cricetulus_griseus_chok1gshd
ENSOARG00000016579	-	100	96.482	ENSCGRG00001022693	-	100	96.482	Cricetulus_griseus_chok1gshd
ENSOARG00000016579	-	100	96.086	ENSCGRG00000003664	-	100	96.467	Cricetulus_griseus_crigri
ENSOARG00000016579	-	100	82.003	ENSCGRG00000000257	-	100	82.003	Cricetulus_griseus_crigri
ENSOARG00000016579	-	98	81.405	ENSCGRG00000001888	-	96	80.854	Cricetulus_griseus_crigri
ENSOARG00000016579	-	65	53.638	ENSCSEG00000001841	-	71	53.638	Cynoglossus_semilaevis
ENSOARG00000016579	-	100	70.933	ENSDARG00000009585	papola	100	70.933	Danio_rerio
ENSOARG00000016579	-	66	87.321	ENSDORG00000013415	-	100	88.548	Dipodomys_ordii
ENSOARG00000016579	-	99	84.261	ENSETEG00000004889	PAPOLA	100	84.125	Echinops_telfairi
ENSOARG00000016579	-	100	68.470	ENSELUG00000018972	papola	100	68.470	Esox_lucius
ENSOARG00000016579	-	100	98.917	ENSFCAG00000006784	PAPOLA	100	98.917	Felis_catus
ENSOARG00000016579	-	99	88.173	ENSFALG00000002547	PAPOLA	99	87.304	Ficedula_albicollis
ENSOARG00000016579	-	99	95.670	ENSFDAG00000010370	PAPOLA	100	95.670	Fukomys_damarensis
ENSOARG00000016579	-	73	65.814	ENSGMOG00000010209	papola	100	66.179	Gadus_morhua
ENSOARG00000016579	-	100	90.541	ENSGALG00000033099	PAPOLA	100	90.257	Gallus_gallus
ENSOARG00000016579	-	65	53.958	ENSGACG00000006142	-	100	53.542	Gasterosteus_aculeatus
ENSOARG00000016579	-	90	95.317	ENSGAGG00000020500	PAPOLA	99	95.317	Gopherus_agassizii
ENSOARG00000016579	-	100	97.450	ENSGGOG00000006287	PAPOLA	100	97.450	Gorilla_gorilla
ENSOARG00000016579	-	100	96.482	ENSHGLG00000007909	-	100	96.482	Heterocephalus_glaber_female
ENSOARG00000016579	-	100	78.620	ENSHGLG00000007467	-	100	78.214	Heterocephalus_glaber_female
ENSOARG00000016579	-	99	84.877	ENSHGLG00000017457	-	100	84.196	Heterocephalus_glaber_female
ENSOARG00000016579	-	100	96.346	ENSHGLG00100017273	PAPOLA	100	96.346	Heterocephalus_glaber_male
ENSOARG00000016579	-	100	68.401	ENSIPUG00000005919	papola	100	67.714	Ictalurus_punctatus
ENSOARG00000016579	-	100	98.376	ENSSTOG00000011471	PAPOLA	100	98.376	Ictidomys_tridecemlineatus
ENSOARG00000016579	-	99	96.332	ENSJJAG00000024340	Papola	100	96.332	Jaculus_jaculus
ENSOARG00000016579	-	99	77.058	ENSLACG00000018136	PAPOLA	99	77.089	Latimeria_chalumnae
ENSOARG00000016579	-	99	65.737	ENSLOCG00000008632	papola	100	66.310	Lepisosteus_oculatus
ENSOARG00000016579	-	99	96.739	ENSLAFG00000000946	PAPOLA	100	96.617	Loxodonta_africana
ENSOARG00000016579	-	100	97.450	ENSMFAG00000001792	PAPOLA	99	99.076	Macaca_fascicularis
ENSOARG00000016579	-	100	97.450	ENSMMUG00000018610	PAPOLA	100	97.450	Macaca_mulatta
ENSOARG00000016579	-	100	97.450	ENSMNEG00000043747	PAPOLA	100	97.450	Macaca_nemestrina
ENSOARG00000016579	-	100	97.450	ENSMLEG00000032066	PAPOLA	100	97.450	Mandrillus_leucophaeus
ENSOARG00000016579	-	84	89.711	ENSMGAG00000013228	-	100	89.372	Meleagris_gallopavo
ENSOARG00000016579	-	100	96.211	ENSMAUG00000017178	Papola	100	96.211	Mesocricetus_auratus
ENSOARG00000016579	-	100	98.512	ENSMICG00000010347	PAPOLA	100	98.512	Microcebus_murinus
ENSOARG00000016579	-	100	96.752	ENSMOCG00000021670	Papola	100	96.752	Microtus_ochrogaster
ENSOARG00000016579	-	100	96.482	ENSMODG00000012887	-	100	96.482	Monodelphis_domestica
ENSOARG00000016579	-	99	81.074	ENSMODG00000001969	-	99	81.208	Monodelphis_domestica
ENSOARG00000016579	-	100	96.076	MGP_CAROLIEiJ_G0018093	Papola	100	96.076	Mus_caroli
ENSOARG00000016579	-	100	96.346	ENSMUSG00000021111	Papola	100	96.346	Mus_musculus
ENSOARG00000016579	-	100	96.346	MGP_PahariEiJ_G0029850	Papola	100	96.346	Mus_pahari
ENSOARG00000016579	-	100	96.482	MGP_SPRETEiJ_G0018943	Papola	100	96.482	Mus_spretus
ENSOARG00000016579	-	100	98.917	ENSMPUG00000003054	PAPOLA	100	98.917	Mustela_putorius_furo
ENSOARG00000016579	-	100	96.346	ENSMLUG00000010922	PAPOLA	100	96.346	Myotis_lucifugus
ENSOARG00000016579	-	100	96.888	ENSNGAG00000022172	Papola	100	96.888	Nannospalax_galili
ENSOARG00000016579	-	99	92.287	ENSNLEG00000000625	PAPOLA	100	92.287	Nomascus_leucogenys
ENSOARG00000016579	-	67	88.636	ENSMEUG00000007831	-	74	88.189	Notamacropus_eugenii
ENSOARG00000016579	-	97	91.817	ENSOPRG00000007625	PAPOLA	100	91.817	Ochotona_princeps
ENSOARG00000016579	-	64	54.202	ENSONIG00000001062	-	96	54.202	Oreochromis_niloticus
ENSOARG00000016579	-	99	90.095	ENSOANG00000013812	PAPOLA	99	90.625	Ornithorhynchus_anatinus
ENSOARG00000016579	-	99	95.115	ENSOCUG00000011531	PAPOLA	100	94.865	Oryctolagus_cuniculus
ENSOARG00000016579	-	100	98.108	ENSOGAG00000004611	PAPOLA	100	98.108	Otolemur_garnettii
ENSOARG00000016579	-	100	97.450	ENSPPAG00000030505	PAPOLA	100	97.450	Pan_paniscus
ENSOARG00000016579	-	100	98.917	ENSPPRG00000008616	PAPOLA	100	98.917	Panthera_pardus
ENSOARG00000016579	-	99	98.913	ENSPTIG00000018852	PAPOLA	99	98.913	Panthera_tigris_altaica
ENSOARG00000016579	-	100	97.450	ENSPTRG00000006704	PAPOLA	100	97.450	Pan_troglodytes
ENSOARG00000016579	-	100	97.450	ENSPANG00000025582	PAPOLA	100	97.450	Papio_anubis
ENSOARG00000016579	-	100	69.582	ENSPKIG00000014471	papola	100	69.935	Paramormyrops_kingsleyae
ENSOARG00000016579	-	100	93.243	ENSPSIG00000014157	PAPOLA	87	93.243	Pelodiscus_sinensis
ENSOARG00000016579	-	100	96.752	ENSPEMG00000000043	Papola	100	96.752	Peromyscus_maniculatus_bairdii
ENSOARG00000016579	-	100	96.081	ENSPCIG00000013234	PAPOLA	100	96.081	Phascolarctos_cinereus
ENSOARG00000016579	-	100	95.034	ENSPPYG00000006128	PAPOLA	100	95.034	Pongo_abelii
ENSOARG00000016579	-	89	90.854	ENSPCAG00000004199	PAPOLA	100	90.854	Procavia_capensis
ENSOARG00000016579	-	99	95.251	ENSPCOG00000022117	PAPOLA	99	95.380	Propithecus_coquereli
ENSOARG00000016579	-	100	97.294	ENSPVAG00000013925	PAPOLA	100	97.294	Pteropus_vampyrus
ENSOARG00000016579	-	100	70.771	ENSPNAG00000010467	papola	100	70.470	Pygocentrus_nattereri
ENSOARG00000016579	-	100	95.940	ENSRNOG00000004827	Papola	100	95.940	Rattus_norvegicus
ENSOARG00000016579	-	99	93.894	ENSRBIG00000038490	PAPOLA	97	98.305	Rhinopithecus_bieti
ENSOARG00000016579	-	100	97.450	ENSRROG00000025545	PAPOLA	100	97.450	Rhinopithecus_roxellana
ENSOARG00000016579	-	99	97.170	ENSSBOG00000024061	PAPOLA	100	97.039	Saimiri_boliviensis_boliviensis
ENSOARG00000016579	-	99	95.924	ENSSHAG00000015211	PAPOLA	99	95.929	Sarcophilus_harrisii
ENSOARG00000016579	-	100	71.277	ENSSFOG00015004431	papola	99	84.810	Scleropages_formosus
ENSOARG00000016579	-	65	57.438	ENSSDUG00000018247	-	72	57.438	Seriola_dumerili
ENSOARG00000016579	-	100	92.568	ENSSPUG00000005835	PAPOLA	100	92.568	Sphenodon_punctatus
ENSOARG00000016579	-	100	98.512	ENSSSCG00000002505	-	100	98.512	Sus_scrofa
ENSOARG00000016579	-	99	91.045	ENSTGUG00000012687	PAPOLA	100	90.502	Taeniopygia_guttata
ENSOARG00000016579	-	75	88.043	ENSTBEG00000000194	PAPOLA	75	88.043	Tupaia_belangeri
ENSOARG00000016579	-	80	98.701	ENSTTRG00000005717	PAPOLA	80	98.701	Tursiops_truncatus
ENSOARG00000016579	-	57	99.289	ENSUAMG00000025737	PAPOLA	98	99.289	Ursus_americanus
ENSOARG00000016579	-	99	98.234	ENSVPAG00000006464	PAPOLA	100	98.234	Vicugna_pacos
ENSOARG00000016579	-	100	98.512	ENSVVUG00000028340	PAPOLA	100	98.512	Vulpes_vulpes
ENSOARG00000016579	-	100	83.491	ENSXETG00000013949	papola	100	83.491	Xenopus_tropicalis