EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000017238 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 186707 bases
Position: chr3:215464450-215651156
Accession: 101107854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000018504	Ago_hook	PF10427.9	7.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000018766	TNRC6B-201	5592	XM_004007003	ENSOARP00000018504	1823 (aa)	XP_012031070	W5Q712

Gene Model

Click here to download ENSOARG00000017238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000017238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000017238	TNRC6B	92	35.812	ENSOARG00000006041	TNRC6C	98	35.850
ENSOARG00000017238	TNRC6B	98	35.280	ENSOARG00000017950	TNRC6A	97	36.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000017238	TNRC6B	97	92.684	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSOARG00000017238	TNRC6B	99	91.716	ENSAMEG00000011025	TNRC6B	100	90.573	Ailuropoda_melanoleuca
ENSOARG00000017238	TNRC6B	96	82.203	ENSAPLG00000009347	TNRC6B	100	83.664	Anas_platyrhynchos
ENSOARG00000017238	TNRC6B	97	72.402	ENSACAG00000007281	TNRC6B	99	72.905	Anolis_carolinensis
ENSOARG00000017238	TNRC6B	97	94.385	ENSANAG00000035042	TNRC6B	100	96.131	Aotus_nancymaae
ENSOARG00000017238	TNRC6B	51	47.624	ENSAMXG00000008707	tnrc6b	82	46.528	Astyanax_mexicanus
ENSOARG00000017238	TNRC6B	98	98.320	ENSBTAG00000021076	TNRC6B	99	98.320	Bos_taurus
ENSOARG00000017238	TNRC6B	96	95.657	ENSCJAG00000002732	TNRC6B	99	99.718	Callithrix_jacchus
ENSOARG00000017238	TNRC6B	96	96.701	ENSCAFG00000001255	TNRC6B	100	93.788	Canis_familiaris
ENSOARG00000017238	TNRC6B	99	96.077	ENSCAFG00020002189	TNRC6B	99	96.077	Canis_lupus_dingo
ENSOARG00000017238	TNRC6B	99	99.223	ENSCHIG00000003491	TNRC6B	100	99.223	Capra_hircus
ENSOARG00000017238	TNRC6B	97	94.977	ENSTSYG00000011836	TNRC6B	100	95.897	Carlito_syrichta
ENSOARG00000017238	TNRC6B	100	94.575	ENSCPOG00000005705	TNRC6B	100	94.740	Cavia_porcellus
ENSOARG00000017238	TNRC6B	96	94.581	ENSCCAG00000019912	TNRC6B	100	93.318	Cebus_capucinus
ENSOARG00000017238	TNRC6B	96	95.374	ENSCATG00000029291	TNRC6B	100	94.614	Cercocebus_atys
ENSOARG00000017238	TNRC6B	100	94.521	ENSCLAG00000016942	TNRC6B	100	94.521	Chinchilla_lanigera
ENSOARG00000017238	TNRC6B	97	91.732	ENSCSAG00000006021	TNRC6B	99	91.789	Chlorocebus_sabaeus
ENSOARG00000017238	TNRC6B	90	85.130	ENSCPBG00000022932	TNRC6B	99	84.775	Chrysemys_picta_bellii
ENSOARG00000017238	TNRC6B	96	95.146	ENSCANG00000030776	TNRC6B	100	95.199	Colobus_angolensis_palliatus
ENSOARG00000017238	TNRC6B	96	94.084	ENSCGRG00001020166	Tnrc6b	99	93.970	Cricetulus_griseus_chok1gshd
ENSOARG00000017238	TNRC6B	100	94.192	ENSCGRG00000016696	Tnrc6b	99	94.038	Cricetulus_griseus_crigri
ENSOARG00000017238	TNRC6B	100	94.140	ENSDNOG00000012744	TNRC6B	100	94.401	Dasypus_novemcinctus
ENSOARG00000017238	TNRC6B	100	95.230	ENSDORG00000003386	Tnrc6b	100	95.230	Dipodomys_ordii
ENSOARG00000017238	TNRC6B	97	81.523	ENSETEG00000006570	TNRC6B	99	84.542	Echinops_telfairi
ENSOARG00000017238	TNRC6B	100	95.888	ENSEASG00005005306	TNRC6B	100	95.888	Equus_asinus_asinus
ENSOARG00000017238	TNRC6B	100	97.039	ENSECAG00000009759	TNRC6B	100	100.000	Equus_caballus
ENSOARG00000017238	TNRC6B	56	97.802	ENSEEUG00000008690	-	59	97.802	Erinaceus_europaeus
ENSOARG00000017238	TNRC6B	100	97.039	ENSFCAG00000004791	TNRC6B	100	97.039	Felis_catus
ENSOARG00000017238	TNRC6B	93	87.559	ENSFALG00000012195	TNRC6B	100	87.324	Ficedula_albicollis
ENSOARG00000017238	TNRC6B	100	94.849	ENSFDAG00000021368	TNRC6B	100	94.904	Fukomys_damarensis
ENSOARG00000017238	TNRC6B	97	88.040	ENSGALG00000012050	TNRC6B	97	87.816	Gallus_gallus
ENSOARG00000017238	TNRC6B	98	87.039	ENSGAGG00000025188	TNRC6B	98	86.849	Gopherus_agassizii
ENSOARG00000017238	TNRC6B	97	94.901	ENSGGOG00000008444	TNRC6B	100	96.014	Gorilla_gorilla
ENSOARG00000017238	TNRC6B	100	95.285	ENSHGLG00000009306	TNRC6B	100	95.175	Heterocephalus_glaber_female
ENSOARG00000017238	TNRC6B	100	94.792	ENSHGLG00100018108	TNRC6B	100	94.682	Heterocephalus_glaber_male
ENSOARG00000017238	TNRC6B	80	44.539	ENSIPUG00000001515	tnrc6b	93	44.717	Ictalurus_punctatus
ENSOARG00000017238	TNRC6B	100	95.450	ENSSTOG00000008927	TNRC6B	100	95.450	Ictidomys_tridecemlineatus
ENSOARG00000017238	TNRC6B	100	94.079	ENSJJAG00000015779	Tnrc6b	100	94.243	Jaculus_jaculus
ENSOARG00000017238	TNRC6B	98	60.924	ENSLACG00000000628	-	99	61.060	Latimeria_chalumnae
ENSOARG00000017238	TNRC6B	76	94.949	ENSLAFG00000014473	TNRC6B	100	94.275	Loxodonta_africana
ENSOARG00000017238	TNRC6B	96	95.488	ENSMFAG00000003862	TNRC6B	100	94.731	Macaca_fascicularis
ENSOARG00000017238	TNRC6B	100	95.671	ENSMMUG00000021345	TNRC6B	100	95.785	Macaca_mulatta
ENSOARG00000017238	TNRC6B	97	95.460	ENSMNEG00000042745	TNRC6B	99	95.516	Macaca_nemestrina
ENSOARG00000017238	TNRC6B	96	95.488	ENSMLEG00000041780	TNRC6B	100	95.785	Mandrillus_leucophaeus
ENSOARG00000017238	TNRC6B	98	82.856	ENSMGAG00000012333	TNRC6B	99	82.337	Meleagris_gallopavo
ENSOARG00000017238	TNRC6B	100	93.151	ENSMAUG00000016123	Tnrc6b	98	94.151	Mesocricetus_auratus
ENSOARG00000017238	TNRC6B	97	95.611	ENSMICG00000014056	TNRC6B	100	95.902	Microcebus_murinus
ENSOARG00000017238	TNRC6B	97	95.500	ENSMOCG00000020334	Tnrc6b	100	95.500	Microtus_ochrogaster
ENSOARG00000017238	TNRC6B	100	93.538	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	93.757	Mus_caroli
ENSOARG00000017238	TNRC6B	100	93.593	ENSMUSG00000047888	Tnrc6b	100	93.812	Mus_musculus
ENSOARG00000017238	TNRC6B	100	93.315	MGP_PahariEiJ_G0020045	Tnrc6b	100	93.534	Mus_pahari
ENSOARG00000017238	TNRC6B	100	93.702	MGP_SPRETEiJ_G0020941	Tnrc6b	100	93.921	Mus_spretus
ENSOARG00000017238	TNRC6B	95	96.987	ENSMPUG00000016442	TNRC6B	99	84.000	Mustela_putorius_furo
ENSOARG00000017238	TNRC6B	97	90.840	ENSMLUG00000008765	TNRC6B	99	89.739	Myotis_lucifugus
ENSOARG00000017238	TNRC6B	100	94.301	ENSNGAG00000021294	Tnrc6b	100	94.301	Nannospalax_galili
ENSOARG00000017238	TNRC6B	87	93.116	ENSNLEG00000015311	TNRC6B	100	96.249	Nomascus_leucogenys
ENSOARG00000017238	TNRC6B	91	87.762	ENSOPRG00000012054	TNRC6B	88	89.224	Ochotona_princeps
ENSOARG00000017238	TNRC6B	100	95.178	ENSODEG00000013146	TNRC6B	100	95.178	Octodon_degus
ENSOARG00000017238	TNRC6B	50	47.189	ENSONIG00000019679	-	99	42.102	Oreochromis_niloticus
ENSOARG00000017238	TNRC6B	100	94.737	ENSOCUG00000016128	TNRC6B	100	94.792	Oryctolagus_cuniculus
ENSOARG00000017238	TNRC6B	97	90.954	ENSOGAG00000011096	TNRC6B	99	89.799	Otolemur_garnettii
ENSOARG00000017238	TNRC6B	97	94.532	ENSPPAG00000028514	TNRC6B	100	96.127	Pan_paniscus
ENSOARG00000017238	TNRC6B	97	93.360	ENSPPRG00000017741	TNRC6B	100	97.076	Panthera_pardus
ENSOARG00000017238	TNRC6B	97	88.496	ENSPTIG00000022064	TNRC6B	98	90.409	Panthera_tigris_altaica
ENSOARG00000017238	TNRC6B	96	95.170	ENSPTRG00000047826	TNRC6B	100	96.014	Pan_troglodytes
ENSOARG00000017238	TNRC6B	96	86.252	ENSPANG00000009271	TNRC6B	99	87.402	Papio_anubis
ENSOARG00000017238	TNRC6B	97	87.458	ENSPSIG00000005318	TNRC6B	99	87.010	Pelodiscus_sinensis
ENSOARG00000017238	TNRC6B	100	93.593	ENSPEMG00000011403	Tnrc6b	100	93.702	Peromyscus_maniculatus_bairdii
ENSOARG00000017238	TNRC6B	97	86.482	ENSPCIG00000020347	TNRC6B	99	86.765	Phascolarctos_cinereus
ENSOARG00000017238	TNRC6B	69	49.183	ENSPFOG00000006033	-	97	42.059	Poecilia_formosa
ENSOARG00000017238	TNRC6B	76	54.054	ENSPMEG00000006371	-	90	54.739	Poecilia_mexicana
ENSOARG00000017238	TNRC6B	98	92.472	ENSPPYG00000011849	TNRC6B	99	92.797	Pongo_abelii
ENSOARG00000017238	TNRC6B	74	87.591	ENSPCAG00000008739	TNRC6B	76	88.235	Procavia_capensis
ENSOARG00000017238	TNRC6B	99	93.425	ENSPCOG00000020790	TNRC6B	100	96.253	Propithecus_coquereli
ENSOARG00000017238	TNRC6B	93	95.018	ENSPVAG00000004975	TNRC6B	94	95.018	Pteropus_vampyrus
ENSOARG00000017238	TNRC6B	100	94.201	ENSRNOG00000024907	Tnrc6b	100	93.982	Rattus_norvegicus
ENSOARG00000017238	TNRC6B	96	95.295	ENSRBIG00000035576	TNRC6B	99	95.550	Rhinopithecus_bieti
ENSOARG00000017238	TNRC6B	97	95.289	ENSRROG00000031135	TNRC6B	100	95.433	Rhinopithecus_roxellana
ENSOARG00000017238	TNRC6B	97	92.909	ENSSBOG00000029743	TNRC6B	100	93.191	Saimiri_boliviensis_boliviensis
ENSOARG00000017238	TNRC6B	97	81.650	ENSSHAG00000009692	TNRC6B	99	80.973	Sarcophilus_harrisii
ENSOARG00000017238	TNRC6B	65	85.185	ENSSARG00000007971	-	70	84.361	Sorex_araneus
ENSOARG00000017238	TNRC6B	100	96.601	ENSSSCG00000000078	TNRC6B	99	96.475	Sus_scrofa
ENSOARG00000017238	TNRC6B	100	90.789	ENSTTRG00000011465	TNRC6B	100	91.118	Tursiops_truncatus
ENSOARG00000017238	TNRC6B	100	94.408	ENSUAMG00000007174	TNRC6B	99	95.014	Ursus_americanus
ENSOARG00000017238	TNRC6B	97	96.509	ENSUMAG00000014336	TNRC6B	100	96.527	Ursus_maritimus
ENSOARG00000017238	TNRC6B	69	90.562	ENSVPAG00000001467	TNRC6B	75	89.357	Vicugna_pacos
ENSOARG00000017238	TNRC6B	100	96.711	ENSVVUG00000007064	TNRC6B	100	96.670	Vulpes_vulpes