EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000017319 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 10689 bases
Position: chr20:46760692-46771380
Accession: 101118908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000018594	zf-U11-48K	PF05253.12	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000018857	SNRNP48-201	864	XM_004019361	ENSOARP00000018594	287 (aa)	-	W5Q7A2

Gene Model

Click here to download ENSOARG00000017319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000017319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000017319	SNRNP48	99	88.339	ENSG00000168566	SNRNP48	85	88.153	Homo_sapiens
ENSOARG00000017319	SNRNP48	77	51.304	ENSAPOG00000021430	snrnp48	69	50.847	Acanthochromis_polyacanthus
ENSOARG00000017319	SNRNP48	99	86.102	ENSAMEG00000017349	SNRNP48	85	86.102	Ailuropoda_melanoleuca
ENSOARG00000017319	SNRNP48	85	50.000	ENSACIG00000002032	snrnp48	81	45.614	Amphilophus_citrinellus
ENSOARG00000017319	SNRNP48	72	51.675	ENSAOCG00000010562	snrnp48	81	45.424	Amphiprion_ocellaris
ENSOARG00000017319	SNRNP48	96	43.662	ENSAPEG00000003231	snrnp48	82	44.407	Amphiprion_percula
ENSOARG00000017319	SNRNP48	71	53.623	ENSATEG00000020210	snrnp48	72	50.204	Anabas_testudineus
ENSOARG00000017319	SNRNP48	97	64.138	ENSACAG00000002811	SNRNP48	89	64.138	Anolis_carolinensis
ENSOARG00000017319	SNRNP48	99	87.279	ENSANAG00000033538	SNRNP48	85	87.108	Aotus_nancymaae
ENSOARG00000017319	SNRNP48	91	47.407	ENSAMXG00000015309	snrnp48	86	46.075	Astyanax_mexicanus
ENSOARG00000017319	SNRNP48	99	95.406	ENSBTAG00000001123	SNRNP48	84	95.470	Bos_taurus
ENSOARG00000017319	SNRNP48	99	87.986	ENSCJAG00000021330	SNRNP48	85	87.805	Callithrix_jacchus
ENSOARG00000017319	SNRNP48	100	89.199	ENSCAFG00000009574	SNRNP48	71	89.199	Canis_familiaris
ENSOARG00000017319	SNRNP48	100	89.199	ENSCAFG00020013203	SNRNP48	84	89.199	Canis_lupus_dingo
ENSOARG00000017319	SNRNP48	100	98.258	ENSCHIG00000015216	SNRNP48	84	98.258	Capra_hircus
ENSOARG00000017319	SNRNP48	99	88.070	ENSTSYG00000000698	SNRNP48	85	87.805	Carlito_syrichta
ENSOARG00000017319	SNRNP48	99	86.713	ENSCAPG00000006768	SNRNP48	93	86.713	Cavia_aperea
ENSOARG00000017319	SNRNP48	99	86.926	ENSCPOG00000007910	SNRNP48	84	86.713	Cavia_porcellus
ENSOARG00000017319	SNRNP48	99	86.926	ENSCCAG00000035652	SNRNP48	85	86.760	Cebus_capucinus
ENSOARG00000017319	SNRNP48	99	87.279	ENSCATG00000033947	SNRNP48	85	87.108	Cercocebus_atys
ENSOARG00000017319	SNRNP48	99	87.279	ENSCLAG00000003765	SNRNP48	84	87.063	Chinchilla_lanigera
ENSOARG00000017319	SNRNP48	100	87.805	ENSCSAG00000007409	SNRNP48	85	87.805	Chlorocebus_sabaeus
ENSOARG00000017319	SNRNP48	99	63.455	ENSCPBG00000019146	SNRNP48	91	63.211	Chrysemys_picta_bellii
ENSOARG00000017319	SNRNP48	92	31.047	ENSCING00000004121	-	87	30.952	Ciona_intestinalis
ENSOARG00000017319	SNRNP48	99	87.633	ENSCANG00000030017	SNRNP48	85	87.456	Colobus_angolensis_palliatus
ENSOARG00000017319	SNRNP48	100	85.017	ENSCGRG00001001076	-	85	85.017	Cricetulus_griseus_chok1gshd
ENSOARG00000017319	SNRNP48	99	69.258	ENSCGRG00001008805	-	82	68.198	Cricetulus_griseus_chok1gshd
ENSOARG00000017319	SNRNP48	100	85.017	ENSCGRG00000007781	Snrnp48	85	85.017	Cricetulus_griseus_crigri
ENSOARG00000017319	SNRNP48	72	51.196	ENSCSEG00000000722	snrnp48	59	51.196	Cynoglossus_semilaevis
ENSOARG00000017319	SNRNP48	91	48.889	ENSCVAG00000019829	snrnp48	60	51.695	Cyprinodon_variegatus
ENSOARG00000017319	SNRNP48	80	48.945	ENSDARG00000039989	snrnp48	76	45.725	Danio_rerio
ENSOARG00000017319	SNRNP48	100	87.108	ENSDNOG00000014978	SNRNP48	84	87.108	Dasypus_novemcinctus
ENSOARG00000017319	SNRNP48	99	83.916	ENSDORG00000015140	Snrnp48	84	83.916	Dipodomys_ordii
ENSOARG00000017319	SNRNP48	99	89.510	ENSEASG00005012021	SNRNP48	84	89.510	Equus_asinus_asinus
ENSOARG00000017319	SNRNP48	100	89.547	ENSECAG00000026937	SNRNP48	85	89.547	Equus_caballus
ENSOARG00000017319	SNRNP48	100	64.931	ENSEEUG00000015437	SNRNP48	84	64.931	Erinaceus_europaeus
ENSOARG00000017319	SNRNP48	87	50.965	ENSELUG00000009766	snrnp48	65	52.766	Esox_lucius
ENSOARG00000017319	SNRNP48	100	89.895	ENSFCAG00000018853	SNRNP48	85	89.895	Felis_catus
ENSOARG00000017319	SNRNP48	99	65.411	ENSFALG00000007797	SNRNP48	93	65.411	Ficedula_albicollis
ENSOARG00000017319	SNRNP48	99	86.316	ENSFDAG00000009231	SNRNP48	84	86.316	Fukomys_damarensis
ENSOARG00000017319	SNRNP48	70	55.172	ENSFHEG00000014647	snrnp48	97	46.488	Fundulus_heteroclitus
ENSOARG00000017319	SNRNP48	68	53.769	ENSGMOG00000018599	-	69	52.752	Gadus_morhua
ENSOARG00000017319	SNRNP48	90	67.041	ENSGALG00000013005	SNRNP48	90	67.041	Gallus_gallus
ENSOARG00000017319	SNRNP48	71	53.365	ENSGAFG00000021639	snrnp48	82	44.518	Gambusia_affinis
ENSOARG00000017319	SNRNP48	71	52.174	ENSGACG00000017756	-	74	48.810	Gasterosteus_aculeatus
ENSOARG00000017319	SNRNP48	99	62.458	ENSGAGG00000000865	SNRNP48	97	62.207	Gopherus_agassizii
ENSOARG00000017319	SNRNP48	99	87.986	ENSGGOG00000013220	SNRNP48	85	87.805	Gorilla_gorilla
ENSOARG00000017319	SNRNP48	70	53.202	ENSHBUG00000017066	snrnp48	80	46.154	Haplochromis_burtoni
ENSOARG00000017319	SNRNP48	99	87.368	ENSHGLG00000015241	SNRNP48	84	87.368	Heterocephalus_glaber_female
ENSOARG00000017319	SNRNP48	99	87.368	ENSHGLG00100010027	SNRNP48	84	87.368	Heterocephalus_glaber_male
ENSOARG00000017319	SNRNP48	71	48.792	ENSHCOG00000014066	snrnp48	82	43.448	Hippocampus_comes
ENSOARG00000017319	SNRNP48	100	88.850	ENSSTOG00000014635	SNRNP48	85	88.850	Ictidomys_tridecemlineatus
ENSOARG00000017319	SNRNP48	100	81.185	ENSJJAG00000011495	Snrnp48	85	81.185	Jaculus_jaculus
ENSOARG00000017319	SNRNP48	80	49.138	ENSKMAG00000016514	snrnp48	82	43.390	Kryptolebias_marmoratus
ENSOARG00000017319	SNRNP48	77	51.327	ENSLBEG00000026249	snrnp48	83	45.424	Labrus_bergylta
ENSOARG00000017319	SNRNP48	100	54.795	ENSLACG00000003958	SNRNP48	85	54.795	Latimeria_chalumnae
ENSOARG00000017319	SNRNP48	83	53.279	ENSLOCG00000004187	snrnp48	82	51.034	Lepisosteus_oculatus
ENSOARG00000017319	SNRNP48	99	85.866	ENSLAFG00000011152	SNRNP48	85	85.714	Loxodonta_africana
ENSOARG00000017319	SNRNP48	99	87.986	ENSMFAG00000045216	SNRNP48	85	87.805	Macaca_fascicularis
ENSOARG00000017319	SNRNP48	99	87.986	ENSMMUG00000014785	SNRNP48	85	87.805	Macaca_mulatta
ENSOARG00000017319	SNRNP48	99	87.633	ENSMNEG00000042269	SNRNP48	85	87.456	Macaca_nemestrina
ENSOARG00000017319	SNRNP48	99	87.986	ENSMLEG00000034004	SNRNP48	85	87.805	Mandrillus_leucophaeus
ENSOARG00000017319	SNRNP48	71	50.962	ENSMAMG00000018673	snrnp48	71	46.341	Mastacembelus_armatus
ENSOARG00000017319	SNRNP48	98	63.946	ENSMGAG00000006037	SNRNP48	99	65.068	Meleagris_gallopavo
ENSOARG00000017319	SNRNP48	100	85.017	ENSMAUG00000011944	Snrnp48	85	85.017	Mesocricetus_auratus
ENSOARG00000017319	SNRNP48	99	87.279	ENSMICG00000012497	SNRNP48	85	87.108	Microcebus_murinus
ENSOARG00000017319	SNRNP48	100	85.366	ENSMOCG00000015555	Snrnp48	85	85.366	Microtus_ochrogaster
ENSOARG00000017319	SNRNP48	64	52.688	ENSMMOG00000003072	-	58	52.688	Mola_mola
ENSOARG00000017319	SNRNP48	99	72.449	ENSMODG00000009996	SNRNP48	80	72.449	Monodelphis_domestica
ENSOARG00000017319	SNRNP48	78	53.509	ENSMALG00000005725	snrnp48	82	47.405	Monopterus_albus
ENSOARG00000017319	SNRNP48	100	83.624	MGP_CAROLIEiJ_G0018441	Snrnp48	85	83.624	Mus_caroli
ENSOARG00000017319	SNRNP48	100	84.321	ENSMUSG00000021431	Snrnp48	85	84.321	Mus_musculus
ENSOARG00000017319	SNRNP48	100	84.321	MGP_PahariEiJ_G0019509	Snrnp48	85	84.321	Mus_pahari
ENSOARG00000017319	SNRNP48	100	84.321	MGP_SPRETEiJ_G0019321	Snrnp48	85	84.321	Mus_spretus
ENSOARG00000017319	SNRNP48	99	84.615	ENSNGAG00000004849	Snrnp48	84	84.615	Nannospalax_galili
ENSOARG00000017319	SNRNP48	70	52.709	ENSNBRG00000012127	snrnp48	66	50.427	Neolamprologus_brichardi
ENSOARG00000017319	SNRNP48	99	88.339	ENSNLEG00000011667	SNRNP48	85	88.153	Nomascus_leucogenys
ENSOARG00000017319	SNRNP48	94	77.860	ENSOPRG00000015471	SNRNP48	84	77.860	Ochotona_princeps
ENSOARG00000017319	SNRNP48	90	48.855	ENSONIG00000001520	snrnp48	66	50.855	Oreochromis_niloticus
ENSOARG00000017319	SNRNP48	50	70.833	ENSOANG00000019888	-	70	71.233	Ornithorhynchus_anatinus
ENSOARG00000017319	SNRNP48	87	87.600	ENSOCUG00000005168	SNRNP48	83	87.698	Oryctolagus_cuniculus
ENSOARG00000017319	SNRNP48	86	50.980	ENSORLG00000015654	snrnp48	80	47.279	Oryzias_latipes
ENSOARG00000017319	SNRNP48	86	49.804	ENSORLG00020015976	snrnp48	67	46.875	Oryzias_latipes_hni
ENSOARG00000017319	SNRNP48	86	50.980	ENSORLG00015022379	snrnp48	69	47.619	Oryzias_latipes_hsok
ENSOARG00000017319	SNRNP48	79	49.576	ENSOMEG00000022007	snrnp48	80	45.918	Oryzias_melastigma
ENSOARG00000017319	SNRNP48	93	89.474	ENSOGAG00000005275	SNRNP48	82	89.668	Otolemur_garnettii
ENSOARG00000017319	SNRNP48	99	88.339	ENSPPAG00000032873	SNRNP48	85	88.153	Pan_paniscus
ENSOARG00000017319	SNRNP48	100	90.244	ENSPPRG00000004283	SNRNP48	85	90.244	Panthera_pardus
ENSOARG00000017319	SNRNP48	100	90.244	ENSPTIG00000013502	SNRNP48	100	90.244	Panthera_tigris_altaica
ENSOARG00000017319	SNRNP48	99	88.339	ENSPTRG00000017703	SNRNP48	85	88.153	Pan_troglodytes
ENSOARG00000017319	SNRNP48	99	87.986	ENSPANG00000000771	SNRNP48	85	87.805	Papio_anubis
ENSOARG00000017319	SNRNP48	94	48.148	ENSPKIG00000013703	snrnp48	63	46.078	Paramormyrops_kingsleyae
ENSOARG00000017319	SNRNP48	99	63.787	ENSPSIG00000002213	SNRNP48	94	63.787	Pelodiscus_sinensis
ENSOARG00000017319	SNRNP48	72	50.235	ENSPMGG00000008120	snrnp48	73	50.235	Periophthalmus_magnuspinnatus
ENSOARG00000017319	SNRNP48	100	85.366	ENSPEMG00000008872	Snrnp48	85	85.366	Peromyscus_maniculatus_bairdii
ENSOARG00000017319	SNRNP48	75	52.941	ENSPFOG00000003578	snrnp48	82	46.441	Poecilia_formosa
ENSOARG00000017319	SNRNP48	63	54.054	ENSPLAG00000002290	snrnp48	63	54.054	Poecilia_latipinna
ENSOARG00000017319	SNRNP48	75	52.036	ENSPMEG00000018033	snrnp48	82	45.763	Poecilia_mexicana
ENSOARG00000017319	SNRNP48	69	54.455	ENSPREG00000018541	snrnp48	82	47.119	Poecilia_reticulata
ENSOARG00000017319	SNRNP48	99	86.572	ENSPPYG00000016209	SNRNP48	85	86.411	Pongo_abelii
ENSOARG00000017319	SNRNP48	74	69.194	ENSPCAG00000011991	SNRNP48	80	69.302	Procavia_capensis
ENSOARG00000017319	SNRNP48	99	88.693	ENSPVAG00000002854	SNRNP48	85	88.502	Pteropus_vampyrus
ENSOARG00000017319	SNRNP48	70	52.709	ENSPNYG00000015399	snrnp48	77	47.479	Pundamilia_nyererei
ENSOARG00000017319	SNRNP48	100	85.017	ENSRNOG00000013756	Snrnp48	85	85.017	Rattus_norvegicus
ENSOARG00000017319	SNRNP48	89	88.189	ENSRBIG00000043856	SNRNP48	82	87.984	Rhinopithecus_bieti
ENSOARG00000017319	SNRNP48	99	87.633	ENSRROG00000043229	SNRNP48	85	87.456	Rhinopithecus_roxellana
ENSOARG00000017319	SNRNP48	99	87.279	ENSSBOG00000019486	SNRNP48	85	87.108	Saimiri_boliviensis_boliviensis
ENSOARG00000017319	SNRNP48	99	72.696	ENSSHAG00000014483	SNRNP48	84	72.014	Sarcophilus_harrisii
ENSOARG00000017319	SNRNP48	71	54.106	ENSSFOG00015006610	snrnp48	59	51.210	Scleropages_formosus
ENSOARG00000017319	SNRNP48	85	49.194	ENSSDUG00000014953	snrnp48	82	45.675	Seriola_dumerili
ENSOARG00000017319	SNRNP48	85	49.194	ENSSLDG00000005989	snrnp48	81	45.675	Seriola_lalandi_dorsalis
ENSOARG00000017319	SNRNP48	99	62.963	ENSSPUG00000006257	SNRNP48	85	62.963	Sphenodon_punctatus
ENSOARG00000017319	SNRNP48	70	51.232	ENSSPAG00000006454	snrnp48	69	49.153	Stegastes_partitus
ENSOARG00000017319	SNRNP48	99	63.918	ENSTGUG00000007575	SNRNP48	93	63.918	Taeniopygia_guttata
ENSOARG00000017319	SNRNP48	69	54.455	ENSTRUG00000007031	snrnp48	69	51.055	Takifugu_rubripes
ENSOARG00000017319	SNRNP48	69	52.475	ENSTNIG00000012977	-	60	52.475	Tetraodon_nigroviridis
ENSOARG00000017319	SNRNP48	100	70.035	ENSTBEG00000015620	SNRNP48	85	70.035	Tupaia_belangeri
ENSOARG00000017319	SNRNP48	99	89.753	ENSTTRG00000016715	SNRNP48	85	89.895	Tursiops_truncatus
ENSOARG00000017319	SNRNP48	100	89.547	ENSUAMG00000003690	SNRNP48	85	89.547	Ursus_americanus
ENSOARG00000017319	SNRNP48	100	87.805	ENSVPAG00000003557	SNRNP48	100	87.805	Vicugna_pacos
ENSOARG00000017319	SNRNP48	100	88.850	ENSVVUG00000004996	SNRNP48	84	88.850	Vulpes_vulpes
ENSOARG00000017319	SNRNP48	88	57.692	ENSXETG00000020447	snrnp48	87	54.392	Xenopus_tropicalis
ENSOARG00000017319	SNRNP48	66	52.356	ENSXCOG00000004478	snrnp48	58	52.356	Xiphophorus_couchianus
ENSOARG00000017319	SNRNP48	73	53.052	ENSXMAG00000013595	snrnp48	83	45.333	Xiphophorus_maculatus