EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000017899 (Gene tree)
Gene ID: 101108270
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 135688 bases
Position: chr1:162819453-162955140
Accession: 101108270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000019208	CMS1	PF14617.6	9.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000019476	CMSS1-201	876	XM_004002874	ENSOARP00000019208	291 (aa)	XP_004002923	W5Q916

Gene Model

Click here to download ENSOARG00000017899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000017899's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000017899	CMSS1	89	87.597	ENSG00000184220	CMSS1	98	91.250	Homo_sapiens
ENSOARG00000017899	CMSS1	70	64.039	ENSAPOG00000010604	cmss1	99	57.258	Acanthochromis_polyacanthus
ENSOARG00000017899	CMSS1	89	89.147	ENSAMEG00000004092	CMSS1	99	89.147	Ailuropoda_melanoleuca
ENSOARG00000017899	CMSS1	70	53.695	ENSACIG00000021854	cmss1	75	53.695	Amphilophus_citrinellus
ENSOARG00000017899	CMSS1	70	63.054	ENSAOCG00000013361	cmss1	97	52.500	Amphiprion_ocellaris
ENSOARG00000017899	CMSS1	70	63.054	ENSAPEG00000005829	cmss1	97	52.313	Amphiprion_percula
ENSOARG00000017899	CMSS1	78	62.009	ENSATEG00000008209	cmss1	97	55.303	Anabas_testudineus
ENSOARG00000017899	CMSS1	79	69.130	ENSAPLG00000010542	CMSS1	99	69.130	Anas_platyrhynchos
ENSOARG00000017899	CMSS1	91	62.271	ENSACAG00000011065	CMSS1	99	62.271	Anolis_carolinensis
ENSOARG00000017899	CMSS1	90	87.405	ENSANAG00000023565	CMSS1	99	87.405	Aotus_nancymaae
ENSOARG00000017899	CMSS1	70	60.099	ENSACLG00000027294	cmss1	69	60.099	Astatotilapia_calliptera
ENSOARG00000017899	CMSS1	69	56.219	ENSAMXG00000002046	cmss1	84	52.227	Astyanax_mexicanus
ENSOARG00000017899	CMSS1	89	96.525	ENSBTAG00000013663	CMSS1	94	96.169	Bos_taurus
ENSOARG00000017899	CMSS1	92	85.874	ENSCJAG00000000610	CMSS1	98	88.031	Callithrix_jacchus
ENSOARG00000017899	CMSS1	94	86.131	ENSCAFG00000009230	CMSS1	99	86.131	Canis_familiaris
ENSOARG00000017899	CMSS1	89	89.922	ENSCAFG00020009464	-	94	89.922	Canis_lupus_dingo
ENSOARG00000017899	CMSS1	85	79.352	ENSCAFG00020024156	-	77	78.715	Canis_lupus_dingo
ENSOARG00000017899	CMSS1	90	98.084	ENSCHIG00000013003	CMSS1	94	98.084	Capra_hircus
ENSOARG00000017899	CMSS1	90	85.441	ENSTSYG00000009266	CMSS1	98	86.047	Carlito_syrichta
ENSOARG00000017899	CMSS1	77	71.304	ENSCAPG00000013584	CMSS1	100	70.870	Cavia_aperea
ENSOARG00000017899	CMSS1	90	84.701	ENSCPOG00000014680	CMSS1	96	84.701	Cavia_porcellus
ENSOARG00000017899	CMSS1	89	89.189	ENSCCAG00000034685	CMSS1	98	89.189	Cebus_capucinus
ENSOARG00000017899	CMSS1	89	88.760	ENSCATG00000031980	CMSS1	98	88.760	Cercocebus_atys
ENSOARG00000017899	CMSS1	79	92.140	ENSCLAG00000011241	CMSS1	98	92.140	Chinchilla_lanigera
ENSOARG00000017899	CMSS1	84	88.980	ENSCSAG00000006024	CMSS1	99	88.980	Chlorocebus_sabaeus
ENSOARG00000017899	CMSS1	92	68.030	ENSCHOG00000012098	CMSS1	96	68.030	Choloepus_hoffmanni
ENSOARG00000017899	CMSS1	68	41.500	ENSCING00000014848	-	100	42.021	Ciona_intestinalis
ENSOARG00000017899	CMSS1	89	87.984	ENSCANG00000031337	CMSS1	98	87.984	Colobus_angolensis_palliatus
ENSOARG00000017899	CMSS1	88	80.545	ENSCGRG00001014305	Cmss1	92	80.545	Cricetulus_griseus_chok1gshd
ENSOARG00000017899	CMSS1	88	80.934	ENSCGRG00000006722	Cmss1	99	80.934	Cricetulus_griseus_crigri
ENSOARG00000017899	CMSS1	70	61.576	ENSCSEG00000004958	cmss1	69	61.576	Cynoglossus_semilaevis
ENSOARG00000017899	CMSS1	70	61.576	ENSCVAG00000005039	cmss1	70	61.576	Cyprinodon_variegatus
ENSOARG00000017899	CMSS1	78	53.017	ENSDARG00000112579	cmss1	82	52.720	Danio_rerio
ENSOARG00000017899	CMSS1	91	84.211	ENSDNOG00000040418	CMSS1	94	84.211	Dasypus_novemcinctus
ENSOARG00000017899	CMSS1	90	84.015	ENSDORG00000010461	Cmss1	96	84.015	Dipodomys_ordii
ENSOARG00000017899	CMSS1	94	78.755	ENSEASG00005010966	CMSS1	99	90.000	Equus_asinus_asinus
ENSOARG00000017899	CMSS1	89	88.417	ENSECAG00000015662	CMSS1	99	90.308	Equus_caballus
ENSOARG00000017899	CMSS1	59	87.209	ENSEEUG00000007624	-	62	87.209	Erinaceus_europaeus
ENSOARG00000017899	CMSS1	83	56.967	ENSELUG00000019459	cmss1	81	56.967	Esox_lucius
ENSOARG00000017899	CMSS1	89	91.473	ENSFCAG00000044577	CMSS1	92	91.473	Felis_catus
ENSOARG00000017899	CMSS1	82	63.866	ENSFALG00000005816	CMSS1	100	63.866	Ficedula_albicollis
ENSOARG00000017899	CMSS1	79	89.520	ENSFDAG00000012577	CMSS1	100	89.520	Fukomys_damarensis
ENSOARG00000017899	CMSS1	79	61.111	ENSFHEG00000012008	cmss1	96	61.111	Fundulus_heteroclitus
ENSOARG00000017899	CMSS1	70	61.084	ENSGMOG00000016729	cmss1	72	61.084	Gadus_morhua
ENSOARG00000017899	CMSS1	90	64.045	ENSGALG00000015267	CMSS1	99	64.751	Gallus_gallus
ENSOARG00000017899	CMSS1	71	64.904	ENSGAFG00000021217	cmss1	77	64.532	Gambusia_affinis
ENSOARG00000017899	CMSS1	70	56.158	ENSGACG00000002798	cmss1	72	56.158	Gasterosteus_aculeatus
ENSOARG00000017899	CMSS1	91	64.576	ENSGAGG00000019861	CMSS1	99	64.576	Gopherus_agassizii
ENSOARG00000017899	CMSS1	89	88.760	ENSGGOG00000014125	CMSS1	98	88.760	Gorilla_gorilla
ENSOARG00000017899	CMSS1	70	60.099	ENSHBUG00000008431	cmss1	83	54.545	Haplochromis_burtoni
ENSOARG00000017899	CMSS1	87	85.039	ENSHGLG00000019481	CMSS1	100	85.039	Heterocephalus_glaber_female
ENSOARG00000017899	CMSS1	89	84.884	ENSHGLG00100010314	CMSS1	100	84.884	Heterocephalus_glaber_male
ENSOARG00000017899	CMSS1	76	63.182	ENSHCOG00000003222	cmss1	74	63.182	Hippocampus_comes
ENSOARG00000017899	CMSS1	76	54.955	ENSIPUG00000011591	cmss1	76	54.955	Ictalurus_punctatus
ENSOARG00000017899	CMSS1	89	91.085	ENSSTOG00000019366	CMSS1	92	91.085	Ictidomys_tridecemlineatus
ENSOARG00000017899	CMSS1	89	83.398	ENSJJAG00000014894	Cmss1	90	89.163	Jaculus_jaculus
ENSOARG00000017899	CMSS1	70	54.680	ENSKMAG00000002390	cmss1	81	54.680	Kryptolebias_marmoratus
ENSOARG00000017899	CMSS1	76	52.282	ENSLBEG00000006298	cmss1	83	57.353	Labrus_bergylta
ENSOARG00000017899	CMSS1	79	64.502	ENSLACG00000009293	CMSS1	100	64.502	Latimeria_chalumnae
ENSOARG00000017899	CMSS1	78	57.018	ENSLOCG00000009391	cmss1	97	49.825	Lepisosteus_oculatus
ENSOARG00000017899	CMSS1	79	89.520	ENSLAFG00000017509	CMSS1	100	89.520	Loxodonta_africana
ENSOARG00000017899	CMSS1	89	89.147	ENSMFAG00000045006	CMSS1	98	89.147	Macaca_fascicularis
ENSOARG00000017899	CMSS1	89	88.760	ENSMMUG00000002939	CMSS1	97	91.324	Macaca_mulatta
ENSOARG00000017899	CMSS1	89	88.760	ENSMNEG00000031315	CMSS1	98	88.760	Macaca_nemestrina
ENSOARG00000017899	CMSS1	89	88.372	ENSMLEG00000033660	CMSS1	98	88.372	Mandrillus_leucophaeus
ENSOARG00000017899	CMSS1	78	60.173	ENSMAMG00000017176	cmss1	79	59.740	Mastacembelus_armatus
ENSOARG00000017899	CMSS1	70	60.099	ENSMZEG00005021886	cmss1	69	60.099	Maylandia_zebra
ENSOARG00000017899	CMSS1	79	68.122	ENSMGAG00000014360	CMSS1	100	68.122	Meleagris_gallopavo
ENSOARG00000017899	CMSS1	88	59.144	ENSMAUG00000020609	Cmss1	90	59.144	Mesocricetus_auratus
ENSOARG00000017899	CMSS1	89	88.372	ENSMICG00000048977	CMSS1	98	88.372	Microcebus_murinus
ENSOARG00000017899	CMSS1	92	76.952	ENSMOCG00000021937	Cmss1	96	77.239	Microtus_ochrogaster
ENSOARG00000017899	CMSS1	70	61.576	ENSMMOG00000019794	cmss1	84	61.576	Mola_mola
ENSOARG00000017899	CMSS1	88	73.725	ENSMODG00000002275	CMSS1	95	73.725	Monodelphis_domestica
ENSOARG00000017899	CMSS1	83	57.143	ENSMALG00000004250	cmss1	94	50.172	Monopterus_albus
ENSOARG00000017899	CMSS1	92	78.519	MGP_CAROLIEiJ_G0020824	Cmss1	96	78.810	Mus_caroli
ENSOARG00000017899	CMSS1	92	79.630	ENSMUSG00000022748	Cmss1	96	79.630	Mus_musculus
ENSOARG00000017899	CMSS1	88	80.233	MGP_PahariEiJ_G0016524	Cmss1	92	80.233	Mus_pahari
ENSOARG00000017899	CMSS1	92	79.259	MGP_SPRETEiJ_G0021724	Cmss1	96	79.259	Mus_spretus
ENSOARG00000017899	CMSS1	89	90.000	ENSMPUG00000011324	CMSS1	99	90.000	Mustela_putorius_furo
ENSOARG00000017899	CMSS1	89	90.000	ENSMLUG00000001131	CMSS1	98	90.000	Myotis_lucifugus
ENSOARG00000017899	CMSS1	99	77.241	ENSNGAG00000020316	Cmss1	99	77.241	Nannospalax_galili
ENSOARG00000017899	CMSS1	70	59.606	ENSNBRG00000003095	cmss1	83	54.733	Neolamprologus_brichardi
ENSOARG00000017899	CMSS1	89	90.310	ENSNLEG00000034172	CMSS1	98	90.310	Nomascus_leucogenys
ENSOARG00000017899	CMSS1	79	66.376	ENSMEUG00000014505	CMSS1	100	66.376	Notamacropus_eugenii
ENSOARG00000017899	CMSS1	92	86.245	ENSOPRG00000002986	CMSS1	96	86.567	Ochotona_princeps
ENSOARG00000017899	CMSS1	89	70.385	ENSODEG00000009446	-	94	70.385	Octodon_degus
ENSOARG00000017899	CMSS1	88	82.490	ENSODEG00000003558	-	91	82.490	Octodon_degus
ENSOARG00000017899	CMSS1	89	74.231	ENSODEG00000001853	-	93	74.231	Octodon_degus
ENSOARG00000017899	CMSS1	89	86.047	ENSODEG00000005226	-	92	86.047	Octodon_degus
ENSOARG00000017899	CMSS1	70	60.099	ENSONIG00000006678	cmss1	77	60.099	Oreochromis_niloticus
ENSOARG00000017899	CMSS1	88	70.115	ENSOANG00000007529	CMSS1	99	73.820	Ornithorhynchus_anatinus
ENSOARG00000017899	CMSS1	90	88.889	ENSOCUG00000025366	CMSS1	94	88.889	Oryctolagus_cuniculus
ENSOARG00000017899	CMSS1	76	63.229	ENSORLG00000020340	cmss1	89	57.874	Oryzias_latipes
ENSOARG00000017899	CMSS1	73	58.019	ENSORLG00020012235	cmss1	85	57.635	Oryzias_latipes_hni
ENSOARG00000017899	CMSS1	70	56.650	ENSORLG00015015551	cmss1	75	56.650	Oryzias_latipes_hsok
ENSOARG00000017899	CMSS1	78	60.699	ENSOMEG00000012555	cmss1	88	57.647	Oryzias_melastigma
ENSOARG00000017899	CMSS1	79	89.956	ENSOGAG00000002045	CMSS1	100	89.956	Otolemur_garnettii
ENSOARG00000017899	CMSS1	89	88.760	ENSPPAG00000038515	CMSS1	94	88.760	Pan_paniscus
ENSOARG00000017899	CMSS1	89	90.310	ENSPPRG00000016767	CMSS1	92	90.310	Panthera_pardus
ENSOARG00000017899	CMSS1	89	89.922	ENSPTIG00000018274	CMSS1	92	89.922	Panthera_tigris_altaica
ENSOARG00000017899	CMSS1	89	87.984	ENSPTRG00000015157	CMSS1	99	88.571	Pan_troglodytes
ENSOARG00000017899	CMSS1	90	85.551	ENSPANG00000019980	CMSS1	100	85.551	Papio_anubis
ENSOARG00000017899	CMSS1	92	53.137	ENSPKIG00000012609	cmss1	99	55.019	Paramormyrops_kingsleyae
ENSOARG00000017899	CMSS1	79	72.052	ENSPSIG00000003849	CMSS1	99	72.052	Pelodiscus_sinensis
ENSOARG00000017899	CMSS1	70	59.804	ENSPMGG00000010286	cmss1	87	59.804	Periophthalmus_magnuspinnatus
ENSOARG00000017899	CMSS1	90	80.989	ENSPEMG00000016384	Cmss1	91	82.490	Peromyscus_maniculatus_bairdii
ENSOARG00000017899	CMSS1	70	52.195	ENSPMAG00000001146	cmss1	99	52.709	Petromyzon_marinus
ENSOARG00000017899	CMSS1	90	71.429	ENSPCIG00000015656	CMSS1	99	72.180	Phascolarctos_cinereus
ENSOARG00000017899	CMSS1	70	63.054	ENSPFOG00000016849	cmss1	71	63.054	Poecilia_formosa
ENSOARG00000017899	CMSS1	70	62.562	ENSPLAG00000008323	cmss1	71	62.562	Poecilia_latipinna
ENSOARG00000017899	CMSS1	70	63.054	ENSPMEG00000021020	cmss1	70	63.054	Poecilia_mexicana
ENSOARG00000017899	CMSS1	78	59.657	ENSPREG00000007618	cmss1	69	62.562	Poecilia_reticulata
ENSOARG00000017899	CMSS1	89	87.984	ENSPPYG00000013606	CMSS1	96	86.692	Pongo_abelii
ENSOARG00000017899	CMSS1	89	89.147	ENSPCOG00000020035	CMSS1	98	89.147	Propithecus_coquereli
ENSOARG00000017899	CMSS1	93	76.667	ENSPVAG00000017031	CMSS1	96	76.667	Pteropus_vampyrus
ENSOARG00000017899	CMSS1	61	61.582	ENSPNYG00000013428	cmss1	65	61.582	Pundamilia_nyererei
ENSOARG00000017899	CMSS1	90	48.746	ENSPNAG00000007912	cmss1	94	49.819	Pygocentrus_nattereri
ENSOARG00000017899	CMSS1	88	81.395	ENSRNOG00000027888	Cmss1	99	81.395	Rattus_norvegicus
ENSOARG00000017899	CMSS1	89	87.984	ENSRBIG00000037931	CMSS1	98	87.984	Rhinopithecus_bieti
ENSOARG00000017899	CMSS1	91	86.090	ENSRROG00000042910	CMSS1	98	87.984	Rhinopithecus_roxellana
ENSOARG00000017899	CMSS1	89	88.417	ENSSBOG00000030980	CMSS1	98	88.417	Saimiri_boliviensis_boliviensis
ENSOARG00000017899	CMSS1	86	72.727	ENSSHAG00000009321	CMSS1	99	72.727	Sarcophilus_harrisii
ENSOARG00000017899	CMSS1	78	58.974	ENSSFOG00015001509	cmss1	87	57.540	Scleropages_formosus
ENSOARG00000017899	CMSS1	76	62.555	ENSSMAG00000001653	cmss1	69	63.547	Scophthalmus_maximus
ENSOARG00000017899	CMSS1	78	60.000	ENSSDUG00000007719	cmss1	90	55.939	Seriola_dumerili
ENSOARG00000017899	CMSS1	71	63.462	ENSSLDG00000012300	cmss1	85	56.098	Seriola_lalandi_dorsalis
ENSOARG00000017899	CMSS1	89	74.419	ENSSARG00000003584	CMSS1	92	74.419	Sorex_araneus
ENSOARG00000017899	CMSS1	78	69.163	ENSSPUG00000003865	CMSS1	100	69.163	Sphenodon_punctatus
ENSOARG00000017899	CMSS1	88	55.513	ENSSPAG00000019182	cmss1	81	55.513	Stegastes_partitus
ENSOARG00000017899	CMSS1	95	86.909	ENSSSCG00000011970	CMSS1	96	88.148	Sus_scrofa
ENSOARG00000017899	CMSS1	79	65.066	ENSTGUG00000013635	CMSS1	99	65.066	Taeniopygia_guttata
ENSOARG00000017899	CMSS1	70	61.084	ENSTRUG00000015265	cmss1	72	61.084	Takifugu_rubripes
ENSOARG00000017899	CMSS1	70	53.695	ENSTNIG00000002880	cmss1	73	53.695	Tetraodon_nigroviridis
ENSOARG00000017899	CMSS1	59	91.509	ENSTBEG00000016722	CMSS1	62	91.509	Tupaia_belangeri
ENSOARG00000017899	CMSS1	89	89.147	ENSTTRG00000001562	CMSS1	92	89.147	Tursiops_truncatus
ENSOARG00000017899	CMSS1	91	87.594	ENSUAMG00000024209	CMSS1	100	91.518	Ursus_americanus
ENSOARG00000017899	CMSS1	90	88.889	ENSUMAG00000001983	CMSS1	99	89.535	Ursus_maritimus
ENSOARG00000017899	CMSS1	79	75.546	ENSVPAG00000000263	CMSS1	82	75.546	Vicugna_pacos
ENSOARG00000017899	CMSS1	85	89.474	ENSVVUG00000021647	-	100	89.474	Vulpes_vulpes
ENSOARG00000017899	CMSS1	75	90.367	ENSVVUG00000007776	-	85	90.367	Vulpes_vulpes
ENSOARG00000017899	CMSS1	80	60.426	ENSXETG00000011858	cmss1	84	60.426	Xenopus_tropicalis
ENSOARG00000017899	CMSS1	72	63.158	ENSXCOG00000018724	cmss1	69	63.054	Xiphophorus_couchianus
ENSOARG00000017899	CMSS1	72	63.158	ENSXMAG00000011243	cmss1	76	63.054	Xiphophorus_maculatus