EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000017950 (Gene tree)
Gene ID: 101106899
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 94827 bases
Position: chr24:22384968-22479794
Accession: 101106899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000019271	Ago_hook	PF10427.9	1.1e-18	1	1
ENSOARP00000019269	Ago_hook	PF10427.9	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000019537	TNRC6A-201	6015	-	ENSOARP00000019269	1935 (aa)	-	W5Q977
ENSOART00000019539	TNRC6A-202	5460	XM_004020846	ENSOARP00000019271	1741 (aa)	-	W5Q979

Gene Model

Click here to download ENSOARG00000017950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000017950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000017950	TNRC6A	94	40.442	ENSOARG00000006041	TNRC6C	98	40.174
ENSOARG00000017950	TNRC6A	97	36.702	ENSOARG00000017238	TNRC6B	98	35.280

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000017950	TNRC6A	98	95.981	ENSG00000090905	TNRC6A	100	94.375	Homo_sapiens
ENSOARG00000017950	TNRC6A	99	95.003	ENSAMEG00000009333	TNRC6A	100	95.003	Ailuropoda_melanoleuca
ENSOARG00000017950	TNRC6A	99	80.843	ENSAPLG00000009978	TNRC6A	100	81.305	Anas_platyrhynchos
ENSOARG00000017950	TNRC6A	99	54.173	ENSACAG00000011857	TNRC6A	99	56.173	Anolis_carolinensis
ENSOARG00000017950	TNRC6A	100	94.093	ENSANAG00000025252	TNRC6A	99	94.145	Aotus_nancymaae
ENSOARG00000017950	TNRC6A	97	57.721	ENSAMXG00000019919	tnrc6a	99	56.943	Astyanax_mexicanus
ENSOARG00000017950	TNRC6A	98	98.483	ENSBTAG00000017999	TNRC6A	99	97.324	Bos_taurus
ENSOARG00000017950	TNRC6A	98	95.399	ENSCJAG00000020677	TNRC6A	99	93.769	Callithrix_jacchus
ENSOARG00000017950	TNRC6A	98	96.620	ENSCAFG00000017531	TNRC6A	99	94.972	Canis_familiaris
ENSOARG00000017950	TNRC6A	98	94.988	ENSCAFG00020021160	TNRC6A	99	93.613	Canis_lupus_dingo
ENSOARG00000017950	TNRC6A	100	99.311	ENSCHIG00000019448	TNRC6A	98	99.311	Capra_hircus
ENSOARG00000017950	TNRC6A	100	94.148	ENSTSYG00000012711	TNRC6A	99	94.507	Carlito_syrichta
ENSOARG00000017950	TNRC6A	98	95.108	ENSCPOG00000036684	TNRC6A	99	91.302	Cavia_porcellus
ENSOARG00000017950	TNRC6A	100	93.740	ENSCCAG00000033664	TNRC6A	99	94.151	Cebus_capucinus
ENSOARG00000017950	TNRC6A	98	95.515	ENSCATG00000019284	TNRC6A	99	91.322	Cercocebus_atys
ENSOARG00000017950	TNRC6A	98	91.147	ENSCLAG00000010217	TNRC6A	99	87.628	Chinchilla_lanigera
ENSOARG00000017950	TNRC6A	100	93.949	ENSCSAG00000006561	TNRC6A	99	94.359	Chlorocebus_sabaeus
ENSOARG00000017950	TNRC6A	93	90.712	ENSCHOG00000009374	TNRC6A	92	91.186	Choloepus_hoffmanni
ENSOARG00000017950	TNRC6A	98	82.193	ENSCPBG00000001881	TNRC6A	99	82.193	Chrysemys_picta_bellii
ENSOARG00000017950	TNRC6A	100	94.045	ENSCANG00000041549	TNRC6A	99	94.405	Colobus_angolensis_palliatus
ENSOARG00000017950	TNRC6A	98	93.364	ENSCGRG00001015021	Tnrc6a	99	92.476	Cricetulus_griseus_chok1gshd
ENSOARG00000017950	TNRC6A	98	92.782	ENSCGRG00000013351	Tnrc6a	99	89.311	Cricetulus_griseus_crigri
ENSOARG00000017950	TNRC6A	98	57.167	ENSDARG00000079688	tnrc6a	99	57.143	Danio_rerio
ENSOARG00000017950	TNRC6A	98	92.159	ENSDNOG00000013989	TNRC6A	99	92.525	Dasypus_novemcinctus
ENSOARG00000017950	TNRC6A	98	84.419	ENSETEG00000014658	TNRC6A	99	84.310	Echinops_telfairi
ENSOARG00000017950	TNRC6A	98	96.564	ENSEASG00005017693	TNRC6A	99	94.911	Equus_asinus_asinus
ENSOARG00000017950	TNRC6A	98	96.564	ENSECAG00000025056	TNRC6A	99	94.905	Equus_caballus
ENSOARG00000017950	TNRC6A	98	87.617	ENSEEUG00000004530	TNRC6A	99	88.033	Erinaceus_europaeus
ENSOARG00000017950	TNRC6A	100	93.416	ENSFCAG00000025236	TNRC6A	99	93.776	Felis_catus
ENSOARG00000017950	TNRC6A	98	78.930	ENSFALG00000003757	TNRC6A	99	79.036	Ficedula_albicollis
ENSOARG00000017950	TNRC6A	98	82.281	ENSGALG00000006068	TNRC6A	99	83.034	Gallus_gallus
ENSOARG00000017950	TNRC6A	98	81.514	ENSGAGG00000023209	TNRC6A	99	81.802	Gopherus_agassizii
ENSOARG00000017950	TNRC6A	100	93.750	ENSGGOG00000005137	TNRC6A	99	94.160	Gorilla_gorilla
ENSOARG00000017950	TNRC6A	98	93.768	ENSHGLG00000012474	-	99	89.455	Heterocephalus_glaber_female
ENSOARG00000017950	TNRC6A	98	74.227	ENSHGLG00000007368	-	93	70.962	Heterocephalus_glaber_female
ENSOARG00000017950	TNRC6A	98	93.695	ENSHGLG00100012496	-	99	89.273	Heterocephalus_glaber_male
ENSOARG00000017950	TNRC6A	100	92.992	ENSSTOG00000023394	TNRC6A	98	93.453	Ictidomys_tridecemlineatus
ENSOARG00000017950	TNRC6A	98	68.541	ENSLACG00000006277	TNRC6A	100	69.231	Latimeria_chalumnae
ENSOARG00000017950	TNRC6A	100	83.223	ENSLOCG00000005517	tnrc6a	92	83.223	Lepisosteus_oculatus
ENSOARG00000017950	TNRC6A	98	94.817	ENSLAFG00000004209	TNRC6A	99	90.748	Loxodonta_africana
ENSOARG00000017950	TNRC6A	98	92.184	ENSMFAG00000003824	TNRC6A	99	92.547	Macaca_fascicularis
ENSOARG00000017950	TNRC6A	100	93.840	ENSMMUG00000020428	TNRC6A	99	94.251	Macaca_mulatta
ENSOARG00000017950	TNRC6A	98	95.399	ENSMNEG00000034854	TNRC6A	99	93.616	Macaca_nemestrina
ENSOARG00000017950	TNRC6A	98	92.188	ENSMLEG00000042737	TNRC6A	98	91.260	Mandrillus_leucophaeus
ENSOARG00000017950	TNRC6A	99	80.269	ENSMGAG00000006455	TNRC6A	99	79.309	Meleagris_gallopavo
ENSOARG00000017950	TNRC6A	98	93.364	ENSMAUG00000012750	Tnrc6a	99	89.969	Mesocricetus_auratus
ENSOARG00000017950	TNRC6A	98	96.622	ENSMICG00000030685	TNRC6A	99	94.775	Microcebus_murinus
ENSOARG00000017950	TNRC6A	98	93.826	ENSMOCG00000000152	Tnrc6a	99	90.015	Microtus_ochrogaster
ENSOARG00000017950	TNRC6A	98	81.292	ENSMODG00000016348	TNRC6A	97	81.718	Monodelphis_domestica
ENSOARG00000017950	TNRC6A	98	92.254	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	93.238	Mus_caroli
ENSOARG00000017950	TNRC6A	98	92.720	ENSMUSG00000052707	Tnrc6a	99	93.594	Mus_musculus
ENSOARG00000017950	TNRC6A	98	92.957	MGP_PahariEiJ_G0013635	Tnrc6a	100	94.021	Mus_pahari
ENSOARG00000017950	TNRC6A	100	91.302	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.594	Mus_spretus
ENSOARG00000017950	TNRC6A	98	85.973	ENSMPUG00000012324	TNRC6A	100	80.932	Mustela_putorius_furo
ENSOARG00000017950	TNRC6A	98	91.807	ENSMLUG00000002701	TNRC6A	100	91.807	Myotis_lucifugus
ENSOARG00000017950	TNRC6A	98	94.820	ENSNGAG00000020702	Tnrc6a	99	91.204	Nannospalax_galili
ENSOARG00000017950	TNRC6A	98	94.186	ENSNLEG00000011851	TNRC6A	98	91.754	Nomascus_leucogenys
ENSOARG00000017950	TNRC6A	75	88.999	ENSMEUG00000015959	-	74	88.999	Notamacropus_eugenii
ENSOARG00000017950	TNRC6A	96	98.881	ENSOPRG00000005819	TNRC6A	95	98.881	Ochotona_princeps
ENSOARG00000017950	TNRC6A	98	89.529	ENSODEG00000012802	TNRC6A	99	85.340	Octodon_degus
ENSOARG00000017950	TNRC6A	95	80.765	ENSOANG00000007672	TNRC6A	99	83.353	Ornithorhynchus_anatinus
ENSOARG00000017950	TNRC6A	98	90.818	ENSOCUG00000004325	TNRC6A	100	91.186	Oryctolagus_cuniculus
ENSOARG00000017950	TNRC6A	100	94.242	ENSOGAG00000006666	TNRC6A	99	94.499	Otolemur_garnettii
ENSOARG00000017950	TNRC6A	98	96.040	ENSPPAG00000028379	TNRC6A	99	94.124	Pan_paniscus
ENSOARG00000017950	TNRC6A	100	93.416	ENSPPRG00000005861	TNRC6A	99	93.776	Panthera_pardus
ENSOARG00000017950	TNRC6A	98	95.105	ENSPTIG00000006346	TNRC6A	99	92.828	Panthera_tigris_altaica
ENSOARG00000017950	TNRC6A	99	92.927	ENSPTRG00000007898	TNRC6A	99	93.818	Pan_troglodytes
ENSOARG00000017950	TNRC6A	100	91.407	ENSPANG00000018523	TNRC6A	99	91.765	Papio_anubis
ENSOARG00000017950	TNRC6A	95	75.862	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSOARG00000017950	TNRC6A	84	77.770	ENSPSIG00000003965	TNRC6A	100	78.243	Pelodiscus_sinensis
ENSOARG00000017950	TNRC6A	98	93.535	ENSPEMG00000016318	Tnrc6a	99	89.810	Peromyscus_maniculatus_bairdii
ENSOARG00000017950	TNRC6A	98	85.357	ENSPCIG00000012106	TNRC6A	99	83.141	Phascolarctos_cinereus
ENSOARG00000017950	TNRC6A	100	93.040	ENSPPYG00000007202	TNRC6A	99	93.501	Pongo_abelii
ENSOARG00000017950	TNRC6A	95	98.969	ENSPCAG00000008260	TNRC6A	93	98.969	Procavia_capensis
ENSOARG00000017950	TNRC6A	100	92.158	ENSPCOG00000010134	TNRC6A	99	92.465	Propithecus_coquereli
ENSOARG00000017950	TNRC6A	89	70.347	ENSPVAG00000012066	TNRC6A	99	70.578	Pteropus_vampyrus
ENSOARG00000017950	TNRC6A	98	92.899	ENSRNOG00000024737	Tnrc6a	98	91.406	Rattus_norvegicus
ENSOARG00000017950	TNRC6A	98	95.457	ENSRBIG00000014222	TNRC6A	99	94.108	Rhinopithecus_bieti
ENSOARG00000017950	TNRC6A	100	94.033	ENSRROG00000032360	TNRC6A	99	94.444	Rhinopithecus_roxellana
ENSOARG00000017950	TNRC6A	99	93.208	ENSSBOG00000036197	TNRC6A	100	96.035	Saimiri_boliviensis_boliviensis
ENSOARG00000017950	TNRC6A	98	83.801	ENSSHAG00000008811	TNRC6A	99	84.545	Sarcophilus_harrisii
ENSOARG00000017950	TNRC6A	98	58.324	ENSSFOG00015008920	tnrc6a	99	63.703	Scleropages_formosus
ENSOARG00000017950	TNRC6A	73	82.437	ENSSARG00000002479	TNRC6A	89	81.720	Sorex_araneus
ENSOARG00000017950	TNRC6A	98	77.618	ENSSPUG00000010525	TNRC6A	100	78.237	Sphenodon_punctatus
ENSOARG00000017950	TNRC6A	100	97.418	ENSSSCG00000038870	TNRC6A	100	97.649	Sus_scrofa
ENSOARG00000017950	TNRC6A	99	81.550	ENSTGUG00000006142	TNRC6A	99	77.277	Taeniopygia_guttata
ENSOARG00000017950	TNRC6A	99	91.207	ENSTBEG00000014965	TNRC6A	99	91.567	Tupaia_belangeri
ENSOARG00000017950	TNRC6A	92	97.535	ENSTTRG00000002008	TNRC6A	90	97.535	Tursiops_truncatus
ENSOARG00000017950	TNRC6A	78	96.114	ENSUAMG00000006656	-	93	91.131	Ursus_americanus
ENSOARG00000017950	TNRC6A	98	95.029	ENSUMAG00000008274	TNRC6A	100	96.926	Ursus_maritimus
ENSOARG00000017950	TNRC6A	57	85.259	ENSVPAG00000010764	-	57	85.259	Vicugna_pacos
ENSOARG00000017950	TNRC6A	98	96.562	ENSVVUG00000005380	TNRC6A	99	94.713	Vulpes_vulpes
ENSOARG00000017950	TNRC6A	98	64.370	ENSXETG00000030437	TNRC6A	99	65.019	Xenopus_tropicalis