EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000017955 (Gene tree)
Gene ID: 101117746
Gene Symbol: PRDM4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 23170 bases
Position: chr3:176035903-176059072
Accession: 101117746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000019274	zf-C2H2	PF00096.26	3.4e-20	1	2
ENSOARP00000019274	zf-C2H2	PF00096.26	3.4e-20	2	2
ENSOARP00000019274	zf-met	PF12874.7	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000019542	PRDM4-201	2821	XM_004006704	ENSOARP00000019274	801 (aa)	XP_004006753	W5Q982

Gene Model

Click here to download ENSOARG00000017955's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas04722	Neurotrophin signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000017955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000017955	PRDM4	54	32.231	ENSOARG00000010468	PRDM15	57	40.123

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000017955	PRDM4	100	96.629	ENSG00000110851	PRDM4	100	97.333	Homo_sapiens
ENSOARG00000017955	PRDM4	99	97.247	ENSAMEG00000016174	PRDM4	99	97.247	Ailuropoda_melanoleuca
ENSOARG00000017955	PRDM4	99	87.719	ENSAPLG00000009846	PRDM4	99	87.218	Anas_platyrhynchos
ENSOARG00000017955	PRDM4	100	96.504	ENSANAG00000024800	PRDM4	100	96.504	Aotus_nancymaae
ENSOARG00000017955	PRDM4	100	98.627	ENSBTAG00000012999	PRDM4	100	98.627	Bos_taurus
ENSOARG00000017955	PRDM4	100	96.005	ENSCJAG00000015261	PRDM4	100	96.005	Callithrix_jacchus
ENSOARG00000017955	PRDM4	100	97.503	ENSCAFG00000001788	PRDM4	100	97.503	Canis_familiaris
ENSOARG00000017955	PRDM4	100	97.503	ENSCAFG00020004916	PRDM4	100	97.503	Canis_lupus_dingo
ENSOARG00000017955	PRDM4	100	99.251	ENSCHIG00000019409	PRDM4	100	99.251	Capra_hircus
ENSOARG00000017955	PRDM4	100	96.754	ENSTSYG00000009248	PRDM4	100	96.754	Carlito_syrichta
ENSOARG00000017955	PRDM4	99	90.488	ENSCAPG00000013937	PRDM4	99	90.488	Cavia_aperea
ENSOARG00000017955	PRDM4	99	89.938	ENSCPOG00000022385	PRDM4	100	89.938	Cavia_porcellus
ENSOARG00000017955	PRDM4	100	96.629	ENSCCAG00000036033	PRDM4	100	96.629	Cebus_capucinus
ENSOARG00000017955	PRDM4	100	96.255	ENSCATG00000044797	PRDM4	100	96.255	Cercocebus_atys
ENSOARG00000017955	PRDM4	99	92.164	ENSCLAG00000007545	PRDM4	100	92.164	Chinchilla_lanigera
ENSOARG00000017955	PRDM4	100	96.629	ENSCSAG00000002896	PRDM4	100	96.629	Chlorocebus_sabaeus
ENSOARG00000017955	PRDM4	71	96.364	ENSCHOG00000001744	PRDM4	86	96.364	Choloepus_hoffmanni
ENSOARG00000017955	PRDM4	99	88.206	ENSCPBG00000023187	PRDM4	100	87.704	Chrysemys_picta_bellii
ENSOARG00000017955	PRDM4	100	96.380	ENSCANG00000021804	PRDM4	100	96.380	Colobus_angolensis_palliatus
ENSOARG00000017955	PRDM4	99	92.289	ENSCGRG00001015102	-	100	92.040	Cricetulus_griseus_chok1gshd
ENSOARG00000017955	PRDM4	96	92.258	ENSCGRG00000004044	-	100	92.000	Cricetulus_griseus_crigri
ENSOARG00000017955	PRDM4	100	95.880	ENSDNOG00000032478	PRDM4	100	95.989	Dasypus_novemcinctus
ENSOARG00000017955	PRDM4	99	80.678	ENSDORG00000015081	-	100	80.803	Dipodomys_ordii
ENSOARG00000017955	PRDM4	93	46.067	ENSEBUG00000003775	prdm4	99	46.335	Eptatretus_burgeri
ENSOARG00000017955	PRDM4	100	97.753	ENSECAG00000015423	PRDM4	100	97.753	Equus_caballus
ENSOARG00000017955	PRDM4	94	92.810	ENSEEUG00000006569	PRDM4	99	92.543	Erinaceus_europaeus
ENSOARG00000017955	PRDM4	99	60.510	ENSELUG00000015265	prdm4	99	60.024	Esox_lucius
ENSOARG00000017955	PRDM4	100	97.878	ENSFCAG00000022478	PRDM4	100	97.878	Felis_catus
ENSOARG00000017955	PRDM4	99	87.578	ENSFALG00000013342	PRDM4	100	87.202	Ficedula_albicollis
ENSOARG00000017955	PRDM4	100	86.800	ENSGALG00000012619	PRDM4	100	86.301	Gallus_gallus
ENSOARG00000017955	PRDM4	99	87.845	ENSGAGG00000002763	PRDM4	95	87.343	Gopherus_agassizii
ENSOARG00000017955	PRDM4	99	96.500	ENSGGOG00000001244	PRDM4	99	96.500	Gorilla_gorilla
ENSOARG00000017955	PRDM4	99	93.350	ENSHGLG00000004590	PRDM4	98	92.974	Heterocephalus_glaber_female
ENSOARG00000017955	PRDM4	99	92.174	ENSHGLG00100007464	PRDM4	100	91.801	Heterocephalus_glaber_male
ENSOARG00000017955	PRDM4	95	61.399	ENSIPUG00000024162	prdm4	93	61.488	Ictalurus_punctatus
ENSOARG00000017955	PRDM4	100	95.880	ENSSTOG00000016168	PRDM4	100	95.880	Ictidomys_tridecemlineatus
ENSOARG00000017955	PRDM4	99	94.717	ENSJJAG00000022448	-	95	92.473	Jaculus_jaculus
ENSOARG00000017955	PRDM4	99	72.525	ENSLACG00000007452	PRDM4	99	73.267	Latimeria_chalumnae
ENSOARG00000017955	PRDM4	78	41.689	ENSLOCG00000017092	prdm4	100	53.680	Lepisosteus_oculatus
ENSOARG00000017955	PRDM4	98	96.574	ENSLAFG00000001483	PRDM4	100	96.574	Loxodonta_africana
ENSOARG00000017955	PRDM4	100	96.629	ENSMFAG00000041862	PRDM4	100	96.629	Macaca_fascicularis
ENSOARG00000017955	PRDM4	100	96.629	ENSMMUG00000015550	PRDM4	100	96.629	Macaca_mulatta
ENSOARG00000017955	PRDM4	100	96.380	ENSMNEG00000032319	PRDM4	100	96.380	Macaca_nemestrina
ENSOARG00000017955	PRDM4	100	96.504	ENSMLEG00000039607	PRDM4	100	96.504	Mandrillus_leucophaeus
ENSOARG00000017955	PRDM4	99	79.625	ENSMGAG00000012815	PRDM4	100	79.125	Meleagris_gallopavo
ENSOARG00000017955	PRDM4	100	95.630	ENSMICG00000007807	PRDM4	100	95.630	Microcebus_murinus
ENSOARG00000017955	PRDM4	99	92.982	ENSMOCG00000000753	Prdm4	99	92.732	Microtus_ochrogaster
ENSOARG00000017955	PRDM4	99	94.479	ENSMUSG00000035529	Prdm4	100	94.228	Mus_musculus
ENSOARG00000017955	PRDM4	99	93.726	MGP_PahariEiJ_G0031398	Prdm4	100	93.774	Mus_pahari
ENSOARG00000017955	PRDM4	99	94.981	MGP_SPRETEiJ_G0016505	Prdm4	100	95.044	Mus_spretus
ENSOARG00000017955	PRDM4	99	91.397	ENSMPUG00000012238	PRDM4	99	91.397	Mustela_putorius_furo
ENSOARG00000017955	PRDM4	99	96.617	ENSMLUG00000000767	PRDM4	99	96.617	Myotis_lucifugus
ENSOARG00000017955	PRDM4	99	95.232	ENSNGAG00000018627	Prdm4	100	95.232	Nannospalax_galili
ENSOARG00000017955	PRDM4	100	96.504	ENSNLEG00000006748	PRDM4	100	96.504	Nomascus_leucogenys
ENSOARG00000017955	PRDM4	89	90.376	ENSMEUG00000004495	PRDM4	89	90.376	Notamacropus_eugenii
ENSOARG00000017955	PRDM4	88	95.536	ENSOPRG00000010192	PRDM4	89	95.536	Ochotona_princeps
ENSOARG00000017955	PRDM4	99	89.875	ENSODEG00000014750	PRDM4	99	89.500	Octodon_degus
ENSOARG00000017955	PRDM4	100	91.261	ENSOANG00000005526	PRDM4	100	91.261	Ornithorhynchus_anatinus
ENSOARG00000017955	PRDM4	93	96.710	ENSOCUG00000012859	PRDM4	96	96.710	Oryctolagus_cuniculus
ENSOARG00000017955	PRDM4	99	96.863	ENSOGAG00000011945	PRDM4	100	96.863	Otolemur_garnettii
ENSOARG00000017955	PRDM4	100	96.629	ENSPPAG00000038438	PRDM4	100	96.629	Pan_paniscus
ENSOARG00000017955	PRDM4	100	97.878	ENSPPRG00000004144	PRDM4	100	97.878	Panthera_pardus
ENSOARG00000017955	PRDM4	100	97.878	ENSPTIG00000005847	PRDM4	100	97.878	Panthera_tigris_altaica
ENSOARG00000017955	PRDM4	100	96.629	ENSPTRG00000005400	PRDM4	100	96.629	Pan_troglodytes
ENSOARG00000017955	PRDM4	100	96.629	ENSPANG00000022084	PRDM4	100	96.629	Papio_anubis
ENSOARG00000017955	PRDM4	99	60.570	ENSPKIG00000000875	prdm4	99	60.451	Paramormyrops_kingsleyae
ENSOARG00000017955	PRDM4	91	82.319	ENSPSIG00000012066	PRDM4	100	82.319	Pelodiscus_sinensis
ENSOARG00000017955	PRDM4	99	94.730	ENSPEMG00000014598	Prdm4	100	94.730	Peromyscus_maniculatus_bairdii
ENSOARG00000017955	PRDM4	100	89.552	ENSPCIG00000009471	PRDM4	100	89.552	Phascolarctos_cinereus
ENSOARG00000017955	PRDM4	100	96.629	ENSPPYG00000004913	PRDM4	100	96.629	Pongo_abelii
ENSOARG00000017955	PRDM4	83	95.955	ENSPCAG00000009987	PRDM4	83	95.955	Procavia_capensis
ENSOARG00000017955	PRDM4	100	95.506	ENSPCOG00000021060	PRDM4	100	95.506	Propithecus_coquereli
ENSOARG00000017955	PRDM4	100	96.509	ENSPVAG00000001596	PRDM4	100	96.509	Pteropus_vampyrus
ENSOARG00000017955	PRDM4	99	93.860	ENSRNOG00000004962	Prdm4	100	93.484	Rattus_norvegicus
ENSOARG00000017955	PRDM4	100	96.380	ENSRBIG00000035488	PRDM4	100	96.380	Rhinopithecus_bieti
ENSOARG00000017955	PRDM4	100	96.504	ENSRROG00000012779	PRDM4	100	96.504	Rhinopithecus_roxellana
ENSOARG00000017955	PRDM4	100	96.504	ENSSBOG00000000403	PRDM4	100	96.504	Saimiri_boliviensis_boliviensis
ENSOARG00000017955	PRDM4	99	64.286	ENSSFOG00015023358	prdm4	99	63.625	Scleropages_formosus
ENSOARG00000017955	PRDM4	100	97.628	ENSSSCG00000000160	PRDM4	100	97.628	Sus_scrofa
ENSOARG00000017955	PRDM4	99	87.719	ENSTGUG00000010962	-	99	87.343	Taeniopygia_guttata
ENSOARG00000017955	PRDM4	73	89.249	ENSTBEG00000001732	PRDM4	84	89.249	Tupaia_belangeri
ENSOARG00000017955	PRDM4	100	97.628	ENSTTRG00000011056	PRDM4	100	97.628	Tursiops_truncatus
ENSOARG00000017955	PRDM4	100	97.628	ENSUAMG00000022796	PRDM4	100	97.628	Ursus_americanus
ENSOARG00000017955	PRDM4	100	97.628	ENSUMAG00000017231	PRDM4	100	97.628	Ursus_maritimus
ENSOARG00000017955	PRDM4	99	97.742	ENSVPAG00000002215	PRDM4	100	97.742	Vicugna_pacos
ENSOARG00000017955	PRDM4	100	97.503	ENSVVUG00000023397	PRDM4	100	97.503	Vulpes_vulpes