EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000018676 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 9600 bases
Position: chr24:36858253-36867852
Accession: 101109584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000020050	PPR	PF01535.20	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000020328	-	2091	XM_004021034	ENSOARP00000020050	696 (aa)	-	W5QBF3

Gene Model

Click here to download ENSOARG00000018676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000018676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000018676	-	100	73.050	ENSG00000106246	PTCD1	100	72.766	Homo_sapiens
ENSOARG00000018676	-	100	73.050	ENSG00000248919	ATP5MF-PTCD1	93	72.766	Homo_sapiens
ENSOARG00000018676	-	79	44.346	ENSAPOG00000010679	ptcd1	85	44.170	Acanthochromis_polyacanthus
ENSOARG00000018676	-	100	76.379	ENSAMEG00000006224	-	93	76.379	Ailuropoda_melanoleuca
ENSOARG00000018676	-	88	46.463	ENSACIG00000017861	ptcd1	87	46.463	Amphilophus_citrinellus
ENSOARG00000018676	-	89	44.992	ENSAOCG00000020741	-	87	44.833	Amphiprion_ocellaris
ENSOARG00000018676	-	84	44.670	ENSAOCG00000022617	ptcd1	86	44.501	Amphiprion_ocellaris
ENSOARG00000018676	-	96	43.741	ENSAPEG00000022632	ptcd1	93	43.594	Amphiprion_percula
ENSOARG00000018676	-	85	46.875	ENSATEG00000007016	ptcd1	82	46.885	Anabas_testudineus
ENSOARG00000018676	-	84	56.975	ENSAPLG00000006862	-	93	56.645	Anas_platyrhynchos
ENSOARG00000018676	-	100	52.786	ENSACAG00000012871	-	93	52.786	Anolis_carolinensis
ENSOARG00000018676	-	98	72.569	ENSANAG00000035790	-	100	72.569	Aotus_nancymaae
ENSOARG00000018676	-	88	45.234	ENSACLG00000002824	ptcd1	86	45.234	Astatotilapia_calliptera
ENSOARG00000018676	-	69	57.143	ENSAMXG00000037292	ptcd1	66	57.143	Astyanax_mexicanus
ENSOARG00000018676	-	100	87.926	ENSBTAG00000020440	-	87	87.926	Bos_taurus
ENSOARG00000018676	-	100	73.513	ENSCJAG00000015815	-	100	73.513	Callithrix_jacchus
ENSOARG00000018676	-	100	75.530	ENSCAFG00000015055	-	93	75.530	Canis_familiaris
ENSOARG00000018676	-	100	75.530	ENSCAFG00020014480	-	93	75.530	Canis_lupus_dingo
ENSOARG00000018676	-	100	92.439	ENSCHIG00000027000	-	99	92.439	Capra_hircus
ENSOARG00000018676	-	100	74.504	ENSTSYG00000029495	-	100	74.504	Carlito_syrichta
ENSOARG00000018676	-	94	71.017	ENSCAPG00000014660	-	100	71.017	Cavia_aperea
ENSOARG00000018676	-	100	70.963	ENSCPOG00000001780	-	100	70.963	Cavia_porcellus
ENSOARG00000018676	-	100	72.380	ENSCCAG00000034025	-	100	72.380	Cebus_capucinus
ENSOARG00000018676	-	100	71.955	ENSCATG00000040859	-	100	72.238	Cercocebus_atys
ENSOARG00000018676	-	98	73.055	ENSCLAG00000006354	-	100	72.419	Chinchilla_lanigera
ENSOARG00000018676	-	91	71.207	ENSCSAG00000017794	-	95	71.517	Chlorocebus_sabaeus
ENSOARG00000018676	-	87	55.368	ENSCPBG00000020866	-	86	55.368	Chrysemys_picta_bellii
ENSOARG00000018676	-	65	37.445	ENSCING00000007717	-	68	40.571	Ciona_intestinalis
ENSOARG00000018676	-	100	71.875	ENSCANG00000023441	-	100	72.159	Colobus_angolensis_palliatus
ENSOARG00000018676	-	99	69.231	ENSCGRG00001023686	Ptcd1	99	68.803	Cricetulus_griseus_chok1gshd
ENSOARG00000018676	-	99	68.980	ENSCGRG00000015031	Ptcd1	99	68.555	Cricetulus_griseus_crigri
ENSOARG00000018676	-	94	41.988	ENSCSEG00000002378	ptcd1	89	42.285	Cynoglossus_semilaevis
ENSOARG00000018676	-	85	44.283	ENSCVAG00000015826	ptcd1	83	44.122	Cyprinodon_variegatus
ENSOARG00000018676	-	85	44.660	ENSCVAG00000003621	ptcd1	88	43.922	Cyprinodon_variegatus
ENSOARG00000018676	-	87	46.910	ENSDARG00000076176	ptcd1	89	46.900	Danio_rerio
ENSOARG00000018676	-	100	71.629	ENSDNOG00000009957	-	100	72.433	Dasypus_novemcinctus
ENSOARG00000018676	-	98	69.741	ENSDORG00000000740	Ptcd1	99	69.741	Dipodomys_ordii
ENSOARG00000018676	-	92	38.559	ENSEBUG00000014515	ptcd1	98	39.966	Eptatretus_burgeri
ENSOARG00000018676	-	100	78.903	ENSEASG00005002480	-	100	78.903	Equus_asinus_asinus
ENSOARG00000018676	-	100	78.762	ENSECAG00000016617	-	100	78.762	Equus_caballus
ENSOARG00000018676	-	86	43.818	ENSELUG00000016517	ptcd1	85	43.975	Esox_lucius
ENSOARG00000018676	-	100	75.809	ENSFCAG00000015069	-	100	75.809	Felis_catus
ENSOARG00000018676	-	87	56.825	ENSFALG00000013803	-	94	54.265	Ficedula_albicollis
ENSOARG00000018676	-	100	71.429	ENSFDAG00000006393	-	100	71.146	Fukomys_damarensis
ENSOARG00000018676	-	79	42.160	ENSFHEG00000012491	ptcd1	94	42.160	Fundulus_heteroclitus
ENSOARG00000018676	-	82	43.947	ENSGMOG00000007639	ptcd1	91	43.688	Gadus_morhua
ENSOARG00000018676	-	86	54.992	ENSGALG00000004711	-	98	51.473	Gallus_gallus
ENSOARG00000018676	-	85	44.065	ENSGAFG00000013175	ptcd1	84	43.415	Gambusia_affinis
ENSOARG00000018676	-	85	46.154	ENSGACG00000016607	ptcd1	91	45.827	Gasterosteus_aculeatus
ENSOARG00000018676	-	86	53.074	ENSGAGG00000021832	-	91	52.351	Gopherus_agassizii
ENSOARG00000018676	-	99	72.869	ENSGGOG00000015123	-	99	72.585	Gorilla_gorilla
ENSOARG00000018676	-	88	45.073	ENSHBUG00000018275	ptcd1	86	45.073	Haplochromis_burtoni
ENSOARG00000018676	-	100	71.994	ENSHGLG00000017621	-	100	71.570	Heterocephalus_glaber_female
ENSOARG00000018676	-	100	71.994	ENSHGLG00100007218	-	100	71.570	Heterocephalus_glaber_male
ENSOARG00000018676	-	83	44.407	ENSHCOG00000010784	ptcd1	82	44.576	Hippocampus_comes
ENSOARG00000018676	-	100	72.152	ENSSTOG00000001682	-	100	72.152	Ictidomys_tridecemlineatus
ENSOARG00000018676	-	100	69.263	ENSJJAG00000000319	Ptcd1	100	68.980	Jaculus_jaculus
ENSOARG00000018676	-	86	44.805	ENSKMAG00000008708	ptcd1	83	44.805	Kryptolebias_marmoratus
ENSOARG00000018676	-	91	44.055	ENSLBEG00000008061	ptcd1	88	43.969	Labrus_bergylta
ENSOARG00000018676	-	87	55.200	ENSLACG00000011172	ptcd1	86	56.000	Latimeria_chalumnae
ENSOARG00000018676	-	93	49.563	ENSLOCG00000004833	ptcd1	99	49.233	Lepisosteus_oculatus
ENSOARG00000018676	-	100	68.917	ENSLAFG00000002588	-	100	68.917	Loxodonta_africana
ENSOARG00000018676	-	100	71.813	ENSMFAG00000041324	-	100	72.096	Macaca_fascicularis
ENSOARG00000018676	-	100	71.671	ENSMMUG00000030408	-	100	71.955	Macaca_mulatta
ENSOARG00000018676	-	100	71.813	ENSMNEG00000043786	-	100	72.096	Macaca_nemestrina
ENSOARG00000018676	-	100	56.799	ENSMLEG00000031179	-	100	58.782	Mandrillus_leucophaeus
ENSOARG00000018676	-	96	44.889	ENSMAMG00000007623	ptcd1	91	44.741	Mastacembelus_armatus
ENSOARG00000018676	-	88	45.234	ENSMZEG00005012722	ptcd1	86	45.234	Maylandia_zebra
ENSOARG00000018676	-	94	54.790	ENSMGAG00000004211	-	88	54.396	Meleagris_gallopavo
ENSOARG00000018676	-	100	73.654	ENSMICG00000017428	-	100	73.654	Microcebus_murinus
ENSOARG00000018676	-	99	39.227	ENSMMOG00000020243	ptcd1	93	42.587	Mola_mola
ENSOARG00000018676	-	99	56.351	ENSMODG00000001350	-	99	56.216	Monodelphis_domestica
ENSOARG00000018676	-	94	43.421	ENSMALG00000018442	ptcd1	88	43.421	Monopterus_albus
ENSOARG00000018676	-	99	71.264	MGP_CAROLIEiJ_G0028011	Ptcd1	99	71.408	Mus_caroli
ENSOARG00000018676	-	99	70.977	ENSMUSG00000029624	Ptcd1	99	71.121	Mus_musculus
ENSOARG00000018676	-	99	70.546	MGP_PahariEiJ_G0024580	Ptcd1	99	70.402	Mus_pahari
ENSOARG00000018676	-	99	71.264	MGP_SPRETEiJ_G0029012	Ptcd1	99	71.552	Mus_spretus
ENSOARG00000018676	-	100	74.121	ENSMPUG00000016518	-	100	74.965	Mustela_putorius_furo
ENSOARG00000018676	-	100	77.356	ENSMLUG00000010994	-	94	77.496	Myotis_lucifugus
ENSOARG00000018676	-	93	43.958	ENSNBRG00000010079	ptcd1	91	44.854	Neolamprologus_brichardi
ENSOARG00000018676	-	100	74.410	ENSNLEG00000011060	-	100	74.410	Nomascus_leucogenys
ENSOARG00000018676	-	97	58.286	ENSMEUG00000006930	-	99	58.143	Notamacropus_eugenii
ENSOARG00000018676	-	90	71.642	ENSOPRG00000013647	-	90	71.642	Ochotona_princeps
ENSOARG00000018676	-	86	44.918	ENSONIG00000003168	ptcd1	99	44.918	Oreochromis_niloticus
ENSOARG00000018676	-	81	54.174	ENSOANG00000007728	-	75	53.833	Ornithorhynchus_anatinus
ENSOARG00000018676	-	99	70.141	ENSOCUG00000010584	-	98	70.000	Oryctolagus_cuniculus
ENSOARG00000018676	-	89	44.976	ENSORLG00000009275	ptcd1	88	44.817	Oryzias_latipes
ENSOARG00000018676	-	89	44.164	ENSORLG00020000988	ptcd1	88	43.849	Oryzias_latipes_hni
ENSOARG00000018676	-	89	44.071	ENSORLG00015010557	ptcd1	88	43.910	Oryzias_latipes_hsok
ENSOARG00000018676	-	85	45.366	ENSOMEG00000020627	ptcd1	87	45.114	Oryzias_melastigma
ENSOARG00000018676	-	99	72.301	ENSOGAG00000010877	-	100	72.301	Otolemur_garnettii
ENSOARG00000018676	-	100	72.766	ENSPPAG00000036024	-	100	72.624	Pan_paniscus
ENSOARG00000018676	-	100	75.524	ENSPPRG00000003478	-	100	75.524	Panthera_pardus
ENSOARG00000018676	-	100	72.624	ENSPTRG00000019452	-	100	72.482	Pan_troglodytes
ENSOARG00000018676	-	100	72.096	ENSPANG00000016730	-	100	72.380	Papio_anubis
ENSOARG00000018676	-	93	48.416	ENSPKIG00000014215	ptcd1	94	48.421	Paramormyrops_kingsleyae
ENSOARG00000018676	-	85	54.457	ENSPSIG00000011184	-	100	54.941	Pelodiscus_sinensis
ENSOARG00000018676	-	73	39.775	ENSPMAG00000009667	ptcd1	100	39.775	Petromyzon_marinus
ENSOARG00000018676	-	99	55.795	ENSPCIG00000024778	-	99	55.795	Phascolarctos_cinereus
ENSOARG00000018676	-	87	43.333	ENSPFOG00000004458	ptcd1	89	42.365	Poecilia_formosa
ENSOARG00000018676	-	89	42.154	ENSPLAG00000011051	ptcd1	89	42.462	Poecilia_latipinna
ENSOARG00000018676	-	87	43.175	ENSPMEG00000020547	ptcd1	89	41.916	Poecilia_mexicana
ENSOARG00000018676	-	89	43.101	ENSPREG00000000059	ptcd1	89	42.857	Poecilia_reticulata
ENSOARG00000018676	-	94	73.795	ENSPPYG00000017377	-	100	73.494	Pongo_abelii
ENSOARG00000018676	-	81	80.851	ENSPCAG00000001852	-	89	80.851	Procavia_capensis
ENSOARG00000018676	-	100	74.929	ENSPCOG00000018596	-	100	74.929	Propithecus_coquereli
ENSOARG00000018676	-	67	85.000	ENSPVAG00000007529	-	73	85.000	Pteropus_vampyrus
ENSOARG00000018676	-	88	45.016	ENSPNYG00000019993	ptcd1	86	45.016	Pundamilia_nyererei
ENSOARG00000018676	-	94	45.194	ENSPNAG00000014931	ptcd1	97	44.678	Pygocentrus_nattereri
ENSOARG00000018676	-	99	69.540	ENSRNOG00000000987	Ptcd1	99	69.397	Rattus_norvegicus
ENSOARG00000018676	-	100	72.017	ENSRBIG00000043393	-	100	72.301	Rhinopithecus_bieti
ENSOARG00000018676	-	100	71.875	ENSRROG00000036420	-	100	72.159	Rhinopithecus_roxellana
ENSOARG00000018676	-	100	73.126	ENSSBOG00000024114	-	100	73.126	Saimiri_boliviensis_boliviensis
ENSOARG00000018676	-	98	53.542	ENSSHAG00000011376	-	98	57.669	Sarcophilus_harrisii
ENSOARG00000018676	-	90	49.077	ENSSFOG00015007909	ptcd1	86	49.461	Scleropages_formosus
ENSOARG00000018676	-	87	43.204	ENSSMAG00000000218	ptcd1	95	43.182	Scophthalmus_maximus
ENSOARG00000018676	-	97	42.346	ENSSDUG00000015671	ptcd1	95	42.264	Seriola_dumerili
ENSOARG00000018676	-	96	41.810	ENSSLDG00000014261	ptcd1	93	41.810	Seriola_lalandi_dorsalis
ENSOARG00000018676	-	92	52.985	ENSSPUG00000003540	-	90	52.090	Sphenodon_punctatus
ENSOARG00000018676	-	92	44.613	ENSSPAG00000011049	ptcd1	87	44.613	Stegastes_partitus
ENSOARG00000018676	-	93	77.301	ENSSSCG00000007622	-	99	77.376	Sus_scrofa
ENSOARG00000018676	-	87	57.003	ENSTGUG00000007563	-	99	57.329	Taeniopygia_guttata
ENSOARG00000018676	-	85	45.964	ENSTRUG00000013471	ptcd1	81	45.470	Takifugu_rubripes
ENSOARG00000018676	-	90	43.574	ENSTNIG00000008271	ptcd1	90	43.574	Tetraodon_nigroviridis
ENSOARG00000018676	-	100	71.509	ENSTBEG00000011021	-	100	71.509	Tupaia_belangeri
ENSOARG00000018676	-	100	78.249	ENSTTRG00000003006	-	100	78.249	Tursiops_truncatus
ENSOARG00000018676	-	100	74.895	ENSUAMG00000008049	-	100	76.379	Ursus_americanus
ENSOARG00000018676	-	99	75.000	ENSVVUG00000008836	-	100	75.000	Vulpes_vulpes
ENSOARG00000018676	-	89	49.765	ENSXETG00000009891	ptcd1	91	49.074	Xenopus_tropicalis
ENSOARG00000018676	-	86	42.628	ENSXMAG00000015540	ptcd1	84	42.468	Xiphophorus_maculatus