EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000018899 (Gene tree)
Gene ID: 101121896
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 6936 bases
Position: chr1:85206808-85213743
Accession: 101121896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000020300	PRP38	PF03371.15	1.2e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000020580	-	1608	XM_004002260	ENSOARP00000020300	535 (aa)	XP_004002309	W5QC53

Gene Model

Click here to download ENSOARG00000018899's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000018899's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000018899	-	87	60.163	ENSATEG00000014482	-	57	85.283	Anabas_testudineus
ENSOARG00000018899	-	100	97.790	ENSBTAG00000047874	PRPF38B	100	97.790	Bos_taurus
ENSOARG00000018899	-	100	77.190	ENSCAFG00020010992	-	100	86.861	Canis_lupus_dingo
ENSOARG00000018899	-	100	97.790	ENSCHIG00000024357	-	100	97.790	Capra_hircus
ENSOARG00000018899	-	81	93.072	ENSCAPG00000009606	-	98	93.317	Cavia_aperea
ENSOARG00000018899	-	100	92.294	ENSCPOG00000039545	-	100	92.477	Cavia_porcellus
ENSOARG00000018899	-	100	91.971	ENSCLAG00000005801	-	100	92.701	Chinchilla_lanigera
ENSOARG00000018899	-	66	84.136	ENSCHOG00000008972	-	100	86.119	Choloepus_hoffmanni
ENSOARG00000018899	-	100	85.740	ENSCPBG00000028299	-	100	85.192	Chrysemys_picta_bellii
ENSOARG00000018899	-	54	56.250	ENSCSAVG00000009443	-	70	74.603	Ciona_savignyi
ENSOARG00000018899	-	95	60.000	ENSCSEG00000015030	-	57	82.955	Cynoglossus_semilaevis
ENSOARG00000018899	-	82	89.579	ENSETEG00000014690	-	73	92.025	Echinops_telfairi
ENSOARG00000018899	-	56	72.848	ENSELUG00000010390	-	54	72.148	Esox_lucius
ENSOARG00000018899	-	85	86.374	ENSFALG00000002673	-	88	88.079	Ficedula_albicollis
ENSOARG00000018899	-	93	56.346	ENSGMOG00000012080	-	57	83.459	Gadus_morhua
ENSOARG00000018899	-	100	85.974	ENSGALG00000001972	-	100	85.428	Gallus_gallus
ENSOARG00000018899	-	82	62.637	ENSGAFG00000008943	-	57	86.364	Gambusia_affinis
ENSOARG00000018899	-	100	86.106	ENSGAGG00000001563	-	100	85.558	Gopherus_agassizii
ENSOARG00000018899	-	100	93.066	ENSHGLG00000016583	PRPF38B	100	93.796	Heterocephalus_glaber_female
ENSOARG00000018899	-	100	92.883	ENSHGLG00100015525	-	100	93.431	Heterocephalus_glaber_male
ENSOARG00000018899	-	76	63.474	ENSHCOG00000001071	-	58	83.774	Hippocampus_comes
ENSOARG00000018899	-	87	58.607	ENSKMAG00000005540	-	56	83.019	Kryptolebias_marmoratus
ENSOARG00000018899	-	99	72.072	ENSLACG00000015511	-	95	72.000	Latimeria_chalumnae
ENSOARG00000018899	-	100	84.743	ENSMOCG00000020285	-	100	91.360	Microtus_ochrogaster
ENSOARG00000018899	-	77	62.273	ENSMMOG00000011639	-	57	83.774	Mola_mola
ENSOARG00000018899	-	59	92.145	ENSMODG00000002350	-	100	91.439	Monodelphis_domestica
ENSOARG00000018899	-	97	59.211	ENSMALG00000019479	-	58	83.764	Monopterus_albus
ENSOARG00000018899	-	79	93.531	ENSOPRG00000013543	-	81	93.531	Ochotona_princeps
ENSOARG00000018899	-	85	64.135	ENSONIG00000010129	-	57	85.283	Oreochromis_niloticus
ENSOARG00000018899	-	90	80.000	ENSOANG00000007343	-	95	88.991	Ornithorhynchus_anatinus
ENSOARG00000018899	-	82	64.901	ENSORLG00000015621	-	84	93.151	Oryzias_latipes
ENSOARG00000018899	-	82	64.680	ENSORLG00020016276	-	84	93.151	Oryzias_latipes_hni
ENSOARG00000018899	-	90	61.963	ENSORLG00015016270	-	69	95.070	Oryzias_latipes_hsok
ENSOARG00000018899	-	82	65.563	ENSOMEG00000022050	-	84	94.444	Oryzias_melastigma
ENSOARG00000018899	-	100	92.883	ENSOGAG00000027048	-	100	94.161	Otolemur_garnettii
ENSOARG00000018899	-	97	62.382	ENSPKIG00000004815	-	57	82.095	Paramormyrops_kingsleyae
ENSOARG00000018899	-	94	64.469	ENSPKIG00000017291	-	52	79.530	Paramormyrops_kingsleyae
ENSOARG00000018899	-	100	85.009	ENSPSIG00000016569	-	100	85.375	Pelodiscus_sinensis
ENSOARG00000018899	-	82	63.297	ENSPFOG00000004025	-	75	95.775	Poecilia_formosa
ENSOARG00000018899	-	83	62.907	ENSPLAG00000019842	-	58	85.556	Poecilia_latipinna
ENSOARG00000018899	-	82	63.020	ENSPMEG00000004807	-	55	86.742	Poecilia_mexicana
ENSOARG00000018899	-	82	62.418	ENSPREG00000015599	-	77	95.775	Poecilia_reticulata
ENSOARG00000018899	-	50	86.194	ENSPNAG00000017484	-	53	84.926	Pygocentrus_nattereri
ENSOARG00000018899	-	100	88.624	ENSRNOG00000020438	Prpf38b	100	91.193	Rattus_norvegicus
ENSOARG00000018899	-	94	62.162	ENSSFOG00015011251	-	74	98.592	Scleropages_formosus
ENSOARG00000018899	-	88	60.792	ENSSLDG00000023487	-	77	95.070	Seriola_lalandi_dorsalis
ENSOARG00000018899	-	100	84.307	ENSSPUG00000017742	-	100	84.124	Sphenodon_punctatus
ENSOARG00000018899	-	80	61.441	ENSTRUG00000011765	-	57	84.962	Takifugu_rubripes
ENSOARG00000018899	-	80	59.226	ENSTNIG00000015299	-	65	84.962	Tetraodon_nigroviridis
ENSOARG00000018899	-	93	91.434	ENSTBEG00000007504	-	99	90.909	Tupaia_belangeri
ENSOARG00000018899	-	100	95.956	ENSTTRG00000006479	-	100	95.956	Tursiops_truncatus
ENSOARG00000018899	-	99	87.061	ENSVPAG00000005541	-	99	87.985	Vicugna_pacos
ENSOARG00000018899	-	95	74.460	ENSXETG00000005260	prpf38b	58	84.797	Xenopus_tropicalis
ENSOARG00000018899	-	82	62.069	ENSXCOG00000008329	-	57	86.364	Xiphophorus_couchianus
ENSOARG00000018899	-	82	62.069	ENSXMAG00000023831	-	57	86.364	Xiphophorus_maculatus