EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000019124 (Gene tree)
Gene ID: 101109157
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 2 tau variant
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 1872 bases
Position: chr3:11870446-11872317
Accession: 101109157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000020541	RRM_1	PF00076.22	3.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000020824	-	1872	XM_004005649	ENSOARP00000020541	623 (aa)	XP_012018612	W5QCU3

Gene Model

Click here to download ENSOARG00000019124's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000019124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000019124	-	100	97.785	ENSOARG00000013688	-	100	97.785
ENSOARG00000019124	-	99	68.454	ENSOARG00000001022	CSTF2	99	68.139

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000019124	-	100	88.924	ENSG00000177613	CSTF2T	100	88.608	Homo_sapiens
ENSOARG00000019124	-	100	90.080	ENSAMEG00000015766	CSTF2T	100	87.639	Ailuropoda_melanoleuca
ENSOARG00000019124	-	52	82.175	ENSANAG00000027508	-	89	80.422	Aotus_nancymaae
ENSOARG00000019124	-	100	96.367	ENSBTAG00000018406	CSTF2T	100	96.367	Bos_taurus
ENSOARG00000019124	-	52	82.477	ENSCJAG00000011554	-	97	80.060	Callithrix_jacchus
ENSOARG00000019124	-	52	78.287	ENSCJAG00000039083	-	93	75.535	Callithrix_jacchus
ENSOARG00000019124	-	97	67.959	ENSCAFG00000015567	CSTF2T	99	70.909	Canis_familiaris
ENSOARG00000019124	-	79	79.767	ENSCAFG00020026426	CSTF2T	100	79.341	Canis_lupus_dingo
ENSOARG00000019124	-	100	96.160	ENSCHIG00000016590	CSTF2T	100	96.160	Capra_hircus
ENSOARG00000019124	-	100	88.346	ENSTSYG00000007750	CSTF2T	100	87.244	Carlito_syrichta
ENSOARG00000019124	-	100	84.251	ENSCPOG00000004195	CSTF2T	100	83.486	Cavia_porcellus
ENSOARG00000019124	-	52	80.781	ENSCCAG00000020816	-	88	79.341	Cebus_capucinus
ENSOARG00000019124	-	52	81.982	ENSCATG00000041868	-	95	79.880	Cercocebus_atys
ENSOARG00000019124	-	100	85.954	ENSCLAG00000017916	CSTF2T	100	84.733	Chinchilla_lanigera
ENSOARG00000019124	-	100	89.937	ENSCSAG00000018437	CSTF2T	100	88.125	Chlorocebus_sabaeus
ENSOARG00000019124	-	51	98.444	ENSCHOG00000011888	-	68	98.444	Choloepus_hoffmanni
ENSOARG00000019124	-	51	80.000	ENSCANG00000005843	-	92	78.788	Colobus_angolensis_palliatus
ENSOARG00000019124	-	100	86.357	ENSCGRG00001003222	Cstf2t	100	81.846	Cricetulus_griseus_chok1gshd
ENSOARG00000019124	-	100	87.403	ENSCGRG00000008682	Cstf2t	100	82.576	Cricetulus_griseus_crigri
ENSOARG00000019124	-	100	88.019	ENSDNOG00000003283	CSTF2T	100	88.254	Dasypus_novemcinctus
ENSOARG00000019124	-	79	90.099	ENSDORG00000011245	Cstf2t	100	86.512	Dipodomys_ordii
ENSOARG00000019124	-	100	92.160	ENSEASG00005012929	CSTF2T	100	92.000	Equus_asinus_asinus
ENSOARG00000019124	-	100	93.280	ENSECAG00000004701	CSTF2T	100	91.892	Equus_caballus
ENSOARG00000019124	-	86	90.306	ENSELUG00000004079	-	80	83.412	Esox_lucius
ENSOARG00000019124	-	100	90.779	ENSFCAG00000046300	CSTF2T	100	91.097	Felis_catus
ENSOARG00000019124	-	100	81.720	ENSFDAG00000021170	CSTF2T	100	83.609	Fukomys_damarensis
ENSOARG00000019124	-	100	88.449	ENSGGOG00000036416	-	100	87.658	Gorilla_gorilla
ENSOARG00000019124	-	100	88.449	ENSGGOG00000042388	-	100	87.658	Gorilla_gorilla
ENSOARG00000019124	-	79	86.180	ENSHGLG00000015478	CSTF2T	100	85.388	Heterocephalus_glaber_female
ENSOARG00000019124	-	79	86.180	ENSHGLG00100000336	CSTF2T	100	86.371	Heterocephalus_glaber_male
ENSOARG00000019124	-	100	86.003	ENSSTOG00000026303	CSTF2T	100	85.537	Ictidomys_tridecemlineatus
ENSOARG00000019124	-	100	83.680	ENSLAFG00000002058	CSTF2T	100	83.200	Loxodonta_africana
ENSOARG00000019124	-	50	81.595	ENSMFAG00000042009	-	97	79.448	Macaca_fascicularis
ENSOARG00000019124	-	52	81.437	ENSMMUG00000042906	-	99	79.341	Macaca_mulatta
ENSOARG00000019124	-	50	81.595	ENSMNEG00000031410	-	97	79.448	Macaca_nemestrina
ENSOARG00000019124	-	100	85.692	ENSMAUG00000006359	Cstf2t	100	87.092	Mesocricetus_auratus
ENSOARG00000019124	-	100	81.562	ENSMICG00000030551	-	100	89.538	Microcebus_murinus
ENSOARG00000019124	-	100	86.730	ENSMICG00000000867	-	100	88.750	Microcebus_murinus
ENSOARG00000019124	-	81	86.502	ENSMOCG00000020428	Cstf2t	100	85.231	Microtus_ochrogaster
ENSOARG00000019124	-	74	86.792	ENSMALG00000008842	-	97	65.882	Monopterus_albus
ENSOARG00000019124	-	80	89.494	MGP_CAROLIEiJ_G0022872	Cstf2t	100	88.144	Mus_caroli
ENSOARG00000019124	-	80	88.566	ENSMUSG00000053536	Cstf2t	100	84.756	Mus_musculus
ENSOARG00000019124	-	80	88.145	MGP_PahariEiJ_G0014365	Cstf2t	100	86.371	Mus_pahari
ENSOARG00000019124	-	100	83.359	MGP_SPRETEiJ_G0023790	Cstf2t	100	86.482	Mus_spretus
ENSOARG00000019124	-	100	88.189	ENSMPUG00000020141	CSTF2T	100	88.504	Mustela_putorius_furo
ENSOARG00000019124	-	100	82.148	ENSMLUG00000027140	-	100	81.517	Myotis_lucifugus
ENSOARG00000019124	-	100	91.339	ENSMLUG00000011187	-	100	88.682	Myotis_lucifugus
ENSOARG00000019124	-	100	85.226	ENSNGAG00000003304	Cstf2t	100	85.070	Nannospalax_galili
ENSOARG00000019124	-	100	85.086	ENSNLEG00000012025	CSTF2T	100	84.144	Nomascus_leucogenys
ENSOARG00000019124	-	100	79.847	ENSODEG00000012386	CSTF2T	100	79.695	Octodon_degus
ENSOARG00000019124	-	80	89.558	ENSOCUG00000004647	-	100	88.554	Oryctolagus_cuniculus
ENSOARG00000019124	-	100	89.793	ENSOGAG00000014565	CSTF2T	100	88.836	Otolemur_garnettii
ENSOARG00000019124	-	51	80.793	ENSPPAG00000032242	-	96	78.963	Pan_paniscus
ENSOARG00000019124	-	100	90.909	ENSPPRG00000018659	CSTF2T	100	90.590	Panthera_pardus
ENSOARG00000019124	-	100	88.871	ENSPTIG00000021145	CSTF2T	100	87.778	Panthera_tigris_altaica
ENSOARG00000019124	-	51	80.793	ENSPTRG00000043097	-	96	78.963	Pan_troglodytes
ENSOARG00000019124	-	50	81.595	ENSPANG00000029734	-	97	79.448	Papio_anubis
ENSOARG00000019124	-	98	53.135	ENSPFOG00000016756	CSTF2T	94	67.059	Poecilia_formosa
ENSOARG00000019124	-	100	89.465	ENSPPYG00000002441	CSTF2T	100	87.969	Pongo_abelii
ENSOARG00000019124	-	81	89.942	ENSPCAG00000000046	CSTF2T	100	88.644	Procavia_capensis
ENSOARG00000019124	-	99	90.287	ENSPCOG00000010982	CSTF2T	99	89.189	Propithecus_coquereli
ENSOARG00000019124	-	100	90.271	ENSPVAG00000006274	CSTF2T	100	89.155	Pteropus_vampyrus
ENSOARG00000019124	-	100	88.043	ENSRNOG00000050289	Cstf2t	100	86.957	Rattus_norvegicus
ENSOARG00000019124	-	100	89.241	ENSRBIG00000029324	CSTF2T	100	88.133	Rhinopithecus_bieti
ENSOARG00000019124	-	100	89.082	ENSRROG00000042507	CSTF2T	100	88.449	Rhinopithecus_roxellana
ENSOARG00000019124	-	100	88.590	ENSSBOG00000022638	CSTF2T	100	87.639	Saimiri_boliviensis_boliviensis
ENSOARG00000019124	-	69	93.701	ENSSARG00000002013	-	87	92.095	Sorex_araneus
ENSOARG00000019124	-	68	90.816	ENSSPAG00000009247	-	96	64.368	Stegastes_partitus
ENSOARG00000019124	-	100	91.284	ENSSSCG00000010430	CSTF2T	100	91.284	Sus_scrofa
ENSOARG00000019124	-	100	79.968	ENSTBEG00000014379	CSTF2T	100	79.180	Tupaia_belangeri
ENSOARG00000019124	-	100	92.000	ENSTTRG00000003341	CSTF2T	100	92.480	Tursiops_truncatus
ENSOARG00000019124	-	100	90.141	ENSUMAG00000011141	CSTF2T	100	88.117	Ursus_maritimus
ENSOARG00000019124	-	66	96.020	ENSVVUG00000002575	CSTF2T	82	95.631	Vulpes_vulpes