EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOARG00000020060 (Gene tree)
Gene ID
101118742
Gene Symbol
PABPC4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Ovis_aries
Status
putative
Strand
Minus strand
Length
18501 bases
Position
chr1:13972375-13990875
Accession
101118742
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOARP00000021539PABPPF00658.181.4e-3111
ENSOARP00000021539RRM_5PF13893.62.9e-0912
ENSOARP00000021539RRM_5PF13893.62.9e-0922
ENSOARP00000021539RRM_1PF00076.223.4e-9214
ENSOARP00000021539RRM_1PF00076.223.4e-9224
ENSOARP00000021539RRM_1PF00076.223.4e-9234
ENSOARP00000021539RRM_1PF00076.223.4e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOART00000021841PABPC4-2017283XM_004001826ENSOARP00000021539660 (aa)XP_004001875W5QFP1
Gene Model
Click here to download ENSOARG00000020060's gene model file
Pathways
Pathway IDPathway NameSource
oas03013RNA transportKEGG
oas03015mRNA surveillance pathwayKEGG
oas03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000020060's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOARG00000020060PABPC45533.553ENSOARG00000003168ELAVL19133.553
ENSOARG00000020060PABPC45530.220ENSOARG00000002680TIAL17730.220
ENSOARG00000020060PABPC45039.130ENSOARG00000006924CELF17038.636
ENSOARG00000020060PABPC49873.267ENSOARG00000000095PABPC19973.090
ENSOARG00000020060PABPC45231.481ENSOARG00000015434HNRNPA05232.450
ENSOARG00000020060PABPC45634.940ENSOARG00000014465ELAVL28634.940
ENSOARG00000020060PABPC45677.041ENSOARG00000005943-9877.041
ENSOARG00000020060PABPC45633.735ENSOARG00000018464ELAVL39233.735
ENSOARG00000020060PABPC45667.135ENSOARG00000010260PABPC59566.942
ENSOARG00000020060PABPC45830.625ENSOARG00000004264ELAVL49033.735
ENSOARG00000020060PABPC49864.580ENSOARG00000004578PABPC1L9964.660
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOARG00000020060PABPC410098.939ENSG00000090621PABPC4100100.000Homo_sapiens
ENSOARG00000020060PABPC49979.242ENSAPOG00000001161pabpc410079.671Acanthochromis_polyacanthus
ENSOARG00000020060PABPC410099.091ENSAMEG00000011535-10099.091Ailuropoda_melanoleuca
ENSOARG00000020060PABPC49854.685ENSAMEG00000015083-9954.378Ailuropoda_melanoleuca
ENSOARG00000020060PABPC410079.970ENSACIG00000023343pabpc410080.568Amphilophus_citrinellus
ENSOARG00000020060PABPC49979.697ENSAOCG00000021529pabpc49190.583Amphiprion_ocellaris
ENSOARG00000020060PABPC49979.697ENSAPEG00000019196pabpc410079.970Amphiprion_percula
ENSOARG00000020060PABPC49978.399ENSATEG00000007402pabpc410079.104Anabas_testudineus
ENSOARG00000020060PABPC49987.557ENSAPLG00000009729-10087.557Anas_platyrhynchos
ENSOARG00000020060PABPC49985.884ENSACAG00000002544PABPC410085.884Anolis_carolinensis
ENSOARG00000020060PABPC410099.091ENSANAG00000025079PABPC410099.091Aotus_nancymaae
ENSOARG00000020060PABPC410079.372ENSACLG00000019558pabpc410079.970Astatotilapia_calliptera
ENSOARG00000020060PABPC49975.909ENSAMXG00000018779pabpc49976.515Astyanax_mexicanus
ENSOARG00000020060PABPC410097.126ENSBTAG00000017125PABPC410097.126Bos_taurus
ENSOARG00000020060PABPC45586.826ENSBTAG00000048536-9886.826Bos_taurus
ENSOARG00000020060PABPC47882.784ENSCJAG00000045953-9282.721Callithrix_jacchus
ENSOARG00000020060PABPC410098.636ENSCJAG00000002512-10098.636Callithrix_jacchus
ENSOARG00000020060PABPC49999.161ENSCAFG00000003081PABPC410095.000Canis_familiaris
ENSOARG00000020060PABPC410099.242ENSCAFG00020004161PABPC410099.242Canis_lupus_dingo
ENSOARG00000020060PABPC4100100.000ENSCHIG00000019398-100100.000Capra_hircus
ENSOARG00000020060PABPC410077.121ENSCHIG00000023385-10077.121Capra_hircus
ENSOARG00000020060PABPC410098.939ENSTSYG00000006532PABPC410098.939Carlito_syrichta
ENSOARG00000020060PABPC49998.936ENSCAPG00000015984PABPC410098.936Cavia_aperea
ENSOARG00000020060PABPC410099.091ENSCPOG00000009552PABPC410099.091Cavia_porcellus
ENSOARG00000020060PABPC410098.788ENSCCAG00000037306PABPC410098.788Cebus_capucinus
ENSOARG00000020060PABPC410099.091ENSCATG00000042164PABPC410099.091Cercocebus_atys
ENSOARG00000020060PABPC410098.636ENSCLAG00000011899PABPC410098.636Chinchilla_lanigera
ENSOARG00000020060PABPC410099.091ENSCSAG00000001135PABPC410099.091Chlorocebus_sabaeus
ENSOARG00000020060PABPC48297.098ENSCHOG00000005327PABPC48197.098Choloepus_hoffmanni
ENSOARG00000020060PABPC49987.860ENSCPBG00000001038PABPC410087.860Chrysemys_picta_bellii
ENSOARG00000020060PABPC49998.925ENSCANG00000034177PABPC410098.925Colobus_angolensis_palliatus
ENSOARG00000020060PABPC410097.289ENSCGRG00001018166Pabpc410097.289Cricetulus_griseus_chok1gshd
ENSOARG00000020060PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSOARG00000020060PABPC410078.924ENSCSEG00000000130pabpc410079.372Cynoglossus_semilaevis
ENSOARG00000020060PABPC49979.787ENSCVAG00000019246pabpc410080.699Cyprinodon_variegatus
ENSOARG00000020060PABPC49981.487ENSDARG00000059259pabpc410081.319Danio_rerio
ENSOARG00000020060PABPC49899.310ENSDNOG00000018444-9999.310Dasypus_novemcinctus
ENSOARG00000020060PABPC410096.818ENSDORG00000011581Pabpc410096.818Dipodomys_ordii
ENSOARG00000020060PABPC48662.039ENSETEG00000009172-9962.087Echinops_telfairi
ENSOARG00000020060PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSOARG00000020060PABPC49973.222ENSEBUG00000000992pabpc49980.130Eptatretus_burgeri
ENSOARG00000020060PABPC49773.148ENSEBUG00000013782pabpc49972.440Eptatretus_burgeri
ENSOARG00000020060PABPC410099.394ENSEASG00005014119PABPC410099.394Equus_asinus_asinus
ENSOARG00000020060PABPC410099.394ENSECAG00000009396PABPC410099.394Equus_caballus
ENSOARG00000020060PABPC410095.909ENSEEUG00000002962PABPC410095.909Erinaceus_europaeus
ENSOARG00000020060PABPC49980.213ENSELUG00000003195pabpc49980.816Esox_lucius
ENSOARG00000020060PABPC410099.394ENSFCAG00000015254-10099.394Felis_catus
ENSOARG00000020060PABPC49987.102ENSFALG00000000543PABPC410087.102Ficedula_albicollis
ENSOARG00000020060PABPC410098.939ENSFDAG00000020016-10098.939Fukomys_damarensis
ENSOARG00000020060PABPC49066.872ENSFDAG00000010581-10062.857Fukomys_damarensis
ENSOARG00000020060PABPC410079.641ENSFHEG00000007548pabpc49390.807Fundulus_heteroclitus
ENSOARG00000020060PABPC49979.066ENSGMOG00000019025pabpc49979.789Gadus_morhua
ENSOARG00000020060PABPC49987.860ENSGALG00000003800PABPC410087.860Gallus_gallus
ENSOARG00000020060PABPC410079.730ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSOARG00000020060PABPC410077.877ENSGACG00000007179pabpc410078.625Gasterosteus_aculeatus
ENSOARG00000020060PABPC49987.709ENSGAGG00000001888PABPC410087.709Gopherus_agassizii
ENSOARG00000020060PABPC410098.939ENSGGOG00000004002PABPC410098.939Gorilla_gorilla
ENSOARG00000020060PABPC410079.522ENSHBUG00000020206pabpc410080.120Haplochromis_burtoni
ENSOARG00000020060PABPC410099.091ENSHGLG00000011162PABPC410099.091Heterocephalus_glaber_female
ENSOARG00000020060PABPC410096.818ENSHGLG00100001580PABPC410096.818Heterocephalus_glaber_male
ENSOARG00000020060PABPC410079.042ENSHCOG00000012694pabpc410079.192Hippocampus_comes
ENSOARG00000020060PABPC49879.755ENSIPUG00000016620pabpc49980.330Ictalurus_punctatus
ENSOARG00000020060PABPC410096.667ENSSTOG00000010416PABPC410096.667Ictidomys_tridecemlineatus
ENSOARG00000020060PABPC410094.697ENSJJAG00000007781Pabpc410094.697Jaculus_jaculus
ENSOARG00000020060PABPC49979.248ENSKMAG00000013597pabpc49979.518Kryptolebias_marmoratus
ENSOARG00000020060PABPC410078.720ENSLBEG00000013654pabpc410079.136Labrus_bergylta
ENSOARG00000020060PABPC49984.314ENSLACG00000011907PABPC410084.314Latimeria_chalumnae
ENSOARG00000020060PABPC49982.078ENSLOCG00000001877pabpc49981.928Lepisosteus_oculatus
ENSOARG00000020060PABPC410099.242ENSLAFG00000000151PABPC410099.242Loxodonta_africana
ENSOARG00000020060PABPC410099.091ENSMFAG00000041481PABPC410099.091Macaca_fascicularis
ENSOARG00000020060PABPC410099.091ENSMMUG00000007497PABPC410099.091Macaca_mulatta
ENSOARG00000020060PABPC410098.939ENSMNEG00000043054PABPC410098.939Macaca_nemestrina
ENSOARG00000020060PABPC410099.091ENSMLEG00000040716PABPC410099.091Mandrillus_leucophaeus
ENSOARG00000020060PABPC49979.394ENSMAMG00000010025pabpc49979.248Mastacembelus_armatus
ENSOARG00000020060PABPC410079.223ENSMZEG00005006141pabpc49290.583Maylandia_zebra
ENSOARG00000020060PABPC49987.248ENSMGAG00000005408PABPC410087.248Meleagris_gallopavo
ENSOARG00000020060PABPC45581.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSOARG00000020060PABPC47495.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSOARG00000020060PABPC46988.462ENSMAUG00000001295-9788.462Mesocricetus_auratus
ENSOARG00000020060PABPC49973.311ENSMICG00000036729-10075.676Microcebus_murinus
ENSOARG00000020060PABPC48994.924ENSMICG00000016633-10094.924Microcebus_murinus
ENSOARG00000020060PABPC410097.741ENSMOCG00000006763Pabpc410097.741Microtus_ochrogaster
ENSOARG00000020060PABPC410074.667ENSMMOG00000002363pabpc49977.225Mola_mola
ENSOARG00000020060PABPC45674.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSOARG00000020060PABPC49889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSOARG00000020060PABPC49979.003ENSMALG00000011017pabpc410079.136Monopterus_albus
ENSOARG00000020060PABPC49984.068MGP_CAROLIEiJ_G0024864-10084.068Mus_caroli
ENSOARG00000020060PABPC410097.727MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSOARG00000020060PABPC410098.182ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSOARG00000020060PABPC49997.849MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSOARG00000020060PABPC49978.900MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSOARG00000020060PABPC410099.394ENSMPUG00000014414-10099.394Mustela_putorius_furo
ENSOARG00000020060PABPC49550.869ENSMPUG00000006836-10050.711Mustela_putorius_furo
ENSOARG00000020060PABPC410092.273ENSMLUG00000012068PABPC410092.273Myotis_lucifugus
ENSOARG00000020060PABPC410096.818ENSNGAG00000018292Pabpc410096.818Nannospalax_galili
ENSOARG00000020060PABPC46486.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSOARG00000020060PABPC45792.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSOARG00000020060PABPC410096.818ENSNLEG00000011928PABPC410096.818Nomascus_leucogenys
ENSOARG00000020060PABPC48298.316ENSOPRG00000011984PABPC48798.316Ochotona_princeps
ENSOARG00000020060PABPC410098.333ENSODEG00000006592-10098.333Octodon_degus
ENSOARG00000020060PABPC49989.117ENSODEG00000017434-10089.002Octodon_degus
ENSOARG00000020060PABPC45085.714ENSODEG00000013457-10085.714Octodon_degus
ENSOARG00000020060PABPC410079.522ENSONIG00000008176pabpc410079.821Oreochromis_niloticus
ENSOARG00000020060PABPC49987.405ENSOANG00000010001PABPC410087.405Ornithorhynchus_anatinus
ENSOARG00000020060PABPC49698.892ENSOCUG00000000562PABPC48898.892Oryctolagus_cuniculus
ENSOARG00000020060PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSOARG00000020060PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSOARG00000020060PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSOARG00000020060PABPC49979.697ENSOMEG00000014410pabpc49983.266Oryzias_melastigma
ENSOARG00000020060PABPC410096.531ENSOGAG00000004067PABPC410096.531Otolemur_garnettii
ENSOARG00000020060PABPC410098.939ENSPPAG00000043625PABPC410098.939Pan_paniscus
ENSOARG00000020060PABPC410099.394ENSPPRG00000024727PABPC410099.394Panthera_pardus
ENSOARG00000020060PABPC410099.394ENSPTIG00000005829PABPC410099.394Panthera_tigris_altaica
ENSOARG00000020060PABPC410098.939ENSPTRG00000000573PABPC410098.939Pan_troglodytes
ENSOARG00000020060PABPC410099.242ENSPANG00000009484PABPC410099.242Papio_anubis
ENSOARG00000020060PABPC49981.089ENSPKIG00000025356pabpc49981.694Paramormyrops_kingsleyae
ENSOARG00000020060PABPC49987.860ENSPSIG00000016892PABPC410087.860Pelodiscus_sinensis
ENSOARG00000020060PABPC410076.621ENSPMGG00000009073pabpc49977.039Periophthalmus_magnuspinnatus
ENSOARG00000020060PABPC410097.273ENSPEMG00000023569-9997.273Peromyscus_maniculatus_bairdii
ENSOARG00000020060PABPC410090.909ENSPEMG00000024193-9990.909Peromyscus_maniculatus_bairdii
ENSOARG00000020060PABPC49667.311ENSPMAG00000007885pabpc410066.479Petromyzon_marinus
ENSOARG00000020060PABPC48970.297ENSPMAG00000002836pabpc410070.627Petromyzon_marinus
ENSOARG00000020060PABPC49893.795ENSPCIG00000020674PABPC410093.571Phascolarctos_cinereus
ENSOARG00000020060PABPC410079.042ENSPFOG00000002682pabpc410079.790Poecilia_formosa
ENSOARG00000020060PABPC410078.892ENSPLAG00000010112pabpc410080.240Poecilia_latipinna
ENSOARG00000020060PABPC49979.483ENSPMEG00000019739pabpc410079.940Poecilia_mexicana
ENSOARG00000020060PABPC410083.220ENSPREG00000001589pabpc410080.240Poecilia_reticulata
ENSOARG00000020060PABPC410098.939ENSPPYG00000001506PABPC410098.939Pongo_abelii
ENSOARG00000020060PABPC410094.545ENSPCAG00000003341PABPC410094.545Procavia_capensis
ENSOARG00000020060PABPC49981.494ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSOARG00000020060PABPC410099.092ENSPCOG00000023725-10099.092Propithecus_coquereli
ENSOARG00000020060PABPC49998.992ENSPVAG00000002187PABPC410098.992Pteropus_vampyrus
ENSOARG00000020060PABPC410079.372ENSPNYG00000006134pabpc410079.970Pundamilia_nyererei
ENSOARG00000020060PABPC410079.790ENSPNAG00000024355pabpc410079.940Pygocentrus_nattereri
ENSOARG00000020060PABPC410093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSOARG00000020060PABPC410095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSOARG00000020060PABPC410099.091ENSRBIG00000039761PABPC410099.091Rhinopithecus_bieti
ENSOARG00000020060PABPC410099.091ENSRROG00000033355PABPC410099.091Rhinopithecus_roxellana
ENSOARG00000020060PABPC410098.939ENSSBOG00000026193PABPC410098.939Saimiri_boliviensis_boliviensis
ENSOARG00000020060PABPC49888.253ENSSHAG00000018139PABPC410087.860Sarcophilus_harrisii
ENSOARG00000020060PABPC49981.975ENSSFOG00015023514pabpc49981.875Scleropages_formosus
ENSOARG00000020060PABPC49978.971ENSSMAG00000009007pabpc49979.123Scophthalmus_maximus
ENSOARG00000020060PABPC49979.091ENSSDUG00000012683pabpc49389.412Seriola_dumerili
ENSOARG00000020060PABPC49979.091ENSSLDG00000013025pabpc49785.217Seriola_lalandi_dorsalis
ENSOARG00000020060PABPC410091.667ENSSARG00000000310PABPC410091.667Sorex_araneus
ENSOARG00000020060PABPC49987.405ENSSPUG00000003204PABPC410087.253Sphenodon_punctatus
ENSOARG00000020060PABPC49979.728ENSSPAG00000009252pabpc49978.987Stegastes_partitus
ENSOARG00000020060PABPC48950.168ENSSSCG00000036170-9650.168Sus_scrofa
ENSOARG00000020060PABPC410099.545ENSSSCG00000003660-10099.545Sus_scrofa
ENSOARG00000020060PABPC49987.746ENSTGUG00000001266PABPC410087.746Taeniopygia_guttata
ENSOARG00000020060PABPC410078.593ENSTRUG00000005907pabpc49979.129Takifugu_rubripes
ENSOARG00000020060PABPC410075.716ENSTNIG00000016902pabpc49975.716Tetraodon_nigroviridis
ENSOARG00000020060PABPC49987.899ENSTBEG00000009035PABPC410087.899Tupaia_belangeri
ENSOARG00000020060PABPC49983.525ENSTTRG00000014340PABPC410087.227Tursiops_truncatus
ENSOARG00000020060PABPC410099.091ENSUAMG00000000303PABPC410099.091Ursus_americanus
ENSOARG00000020060PABPC410099.091ENSUMAG00000019585PABPC410099.091Ursus_maritimus
ENSOARG00000020060PABPC48498.582ENSVPAG00000010041PABPC47798.582Vicugna_pacos
ENSOARG00000020060PABPC410099.242ENSVVUG00000005215PABPC410099.242Vulpes_vulpes
ENSOARG00000020060PABPC49979.666ENSXETG00000010946pabpc410079.666Xenopus_tropicalis
ENSOARG00000020060PABPC45697.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSOARG00000020060PABPC49977.907ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSOARG00000020060PABPC410079.192ENSXMAG00000019007pabpc410080.090Xiphophorus_maculatus

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