EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000020403 (Gene tree)
Gene ID: 101105791
Gene Symbol: LSG1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 24813 bases
Position: chr1:191142284-191167096
Accession: 101105791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000021916	MMR_HSR1	PF01926.23	4.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000022221	LSG1-201	1962	XM_004003031	ENSOARP00000021916	653 (aa)	-	W5QGR7

Gene Model

Click here to download ENSOARG00000020403's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000020403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000020403	LSG1	99	83.156	ENSG00000041802	LSG1	98	92.529	Homo_sapiens
ENSOARG00000020403	LSG1	100	64.688	ENSAPOG00000009694	lsg1	100	64.939	Acanthochromis_polyacanthus
ENSOARG00000020403	LSG1	100	83.030	ENSAMEG00000009343	LSG1	100	83.030	Ailuropoda_melanoleuca
ENSOARG00000020403	LSG1	98	65.938	ENSACIG00000012406	lsg1	100	66.003	Amphilophus_citrinellus
ENSOARG00000020403	LSG1	100	64.787	ENSAOCG00000016066	lsg1	100	64.787	Amphiprion_ocellaris
ENSOARG00000020403	LSG1	100	64.787	ENSAPEG00000003252	lsg1	100	64.787	Amphiprion_percula
ENSOARG00000020403	LSG1	98	64.953	ENSATEG00000011794	lsg1	100	63.229	Anabas_testudineus
ENSOARG00000020403	LSG1	95	65.605	ENSACAG00000004222	LSG1	99	64.650	Anolis_carolinensis
ENSOARG00000020403	LSG1	99	84.674	ENSANAG00000021153	LSG1	99	85.281	Aotus_nancymaae
ENSOARG00000020403	LSG1	100	63.056	ENSACLG00000000520	lsg1	100	63.798	Astatotilapia_calliptera
ENSOARG00000020403	LSG1	100	62.946	ENSAMXG00000008271	lsg1	100	63.554	Astyanax_mexicanus
ENSOARG00000020403	LSG1	99	96.626	ENSBTAG00000008461	LSG1	99	96.626	Bos_taurus
ENSOARG00000020403	LSG1	76	48.357	WBGene00016907	C53H9.2	95	52.055	Caenorhabditis_elegans
ENSOARG00000020403	LSG1	99	83.915	ENSCJAG00000013962	LSG1	99	83.915	Callithrix_jacchus
ENSOARG00000020403	LSG1	95	82.297	ENSCAFG00000013445	LSG1	100	82.297	Canis_familiaris
ENSOARG00000020403	LSG1	100	81.420	ENSCAFG00020002216	LSG1	100	81.420	Canis_lupus_dingo
ENSOARG00000020403	LSG1	100	98.777	ENSCHIG00000015769	LSG1	100	98.777	Capra_hircus
ENSOARG00000020403	LSG1	99	84.219	ENSTSYG00000001447	LSG1	99	83.915	Carlito_syrichta
ENSOARG00000020403	LSG1	95	76.726	ENSCAPG00000009856	LSG1	99	75.199	Cavia_aperea
ENSOARG00000020403	LSG1	99	83.308	ENSCCAG00000035744	LSG1	99	82.853	Cebus_capucinus
ENSOARG00000020403	LSG1	99	83.612	ENSCATG00000042060	LSG1	99	82.246	Cercocebus_atys
ENSOARG00000020403	LSG1	99	83.612	ENSCSAG00000008796	LSG1	92	83.460	Chlorocebus_sabaeus
ENSOARG00000020403	LSG1	100	69.789	ENSCPBG00000015941	LSG1	83	69.789	Chrysemys_picta_bellii
ENSOARG00000020403	LSG1	71	60.733	ENSCING00000007079	-	97	60.733	Ciona_intestinalis
ENSOARG00000020403	LSG1	77	54.365	ENSCSAVG00000002514	-	99	54.365	Ciona_savignyi
ENSOARG00000020403	LSG1	99	83.308	ENSCANG00000030709	LSG1	99	83.915	Colobus_angolensis_palliatus
ENSOARG00000020403	LSG1	99	81.040	ENSCGRG00001019846	Lsg1	99	80.704	Cricetulus_griseus_chok1gshd
ENSOARG00000020403	LSG1	99	81.040	ENSCGRG00000014617	Lsg1	99	80.704	Cricetulus_griseus_crigri
ENSOARG00000020403	LSG1	98	62.766	ENSCSEG00000008522	lsg1	100	61.799	Cynoglossus_semilaevis
ENSOARG00000020403	LSG1	98	65.149	ENSCVAG00000002484	lsg1	100	65.850	Cyprinodon_variegatus
ENSOARG00000020403	LSG1	100	66.161	ENSDARG00000015352	lsg1	100	66.109	Danio_rerio
ENSOARG00000020403	LSG1	99	82.344	ENSDNOG00000006224	LSG1	99	82.040	Dasypus_novemcinctus
ENSOARG00000020403	LSG1	99	46.119	FBgn0266284	Ns3	99	46.049	Drosophila_melanogaster
ENSOARG00000020403	LSG1	88	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSOARG00000020403	LSG1	89	57.641	ENSEBUG00000003119	lsg1	85	56.033	Eptatretus_burgeri
ENSOARG00000020403	LSG1	99	83.612	ENSEASG00005000678	LSG1	99	84.219	Equus_asinus_asinus
ENSOARG00000020403	LSG1	99	83.915	ENSECAG00000017659	LSG1	99	84.522	Equus_caballus
ENSOARG00000020403	LSG1	87	80.342	ENSEEUG00000015217	LSG1	87	80.342	Erinaceus_europaeus
ENSOARG00000020403	LSG1	100	62.709	ENSELUG00000023973	lsg1	100	62.709	Esox_lucius
ENSOARG00000020403	LSG1	100	85.455	ENSFCAG00000024957	LSG1	100	85.455	Felis_catus
ENSOARG00000020403	LSG1	92	66.287	ENSFALG00000007210	LSG1	94	66.287	Ficedula_albicollis
ENSOARG00000020403	LSG1	99	77.147	ENSFDAG00000017373	LSG1	99	77.147	Fukomys_damarensis
ENSOARG00000020403	LSG1	97	64.174	ENSFHEG00000003680	lsg1	99	62.426	Fundulus_heteroclitus
ENSOARG00000020403	LSG1	98	60.031	ENSGMOG00000015834	lsg1	88	71.032	Gadus_morhua
ENSOARG00000020403	LSG1	99	63.568	ENSGALG00000007058	LSG1	87	63.746	Gallus_gallus
ENSOARG00000020403	LSG1	97	64.623	ENSGAFG00000015831	lsg1	99	64.571	Gambusia_affinis
ENSOARG00000020403	LSG1	98	62.577	ENSGACG00000009323	lsg1	100	62.253	Gasterosteus_aculeatus
ENSOARG00000020403	LSG1	99	83.612	ENSGGOG00000000520	LSG1	99	84.219	Gorilla_gorilla
ENSOARG00000020403	LSG1	100	63.855	ENSHBUG00000005659	lsg1	100	64.608	Haplochromis_burtoni
ENSOARG00000020403	LSG1	99	74.772	ENSHGLG00000017390	LSG1	99	75.038	Heterocephalus_glaber_female
ENSOARG00000020403	LSG1	99	74.772	ENSHGLG00100018587	LSG1	99	75.038	Heterocephalus_glaber_male
ENSOARG00000020403	LSG1	98	63.142	ENSHCOG00000016848	lsg1	100	62.634	Hippocampus_comes
ENSOARG00000020403	LSG1	100	64.536	ENSIPUG00000008631	lsg1	100	63.927	Ictalurus_punctatus
ENSOARG00000020403	LSG1	81	78.788	ENSSTOG00000010234	LSG1	99	78.788	Ictidomys_tridecemlineatus
ENSOARG00000020403	LSG1	99	78.354	ENSJJAG00000015513	Lsg1	99	77.948	Jaculus_jaculus
ENSOARG00000020403	LSG1	98	62.813	ENSKMAG00000009681	lsg1	100	62.175	Kryptolebias_marmoratus
ENSOARG00000020403	LSG1	98	64.431	ENSLBEG00000024261	lsg1	100	63.456	Labrus_bergylta
ENSOARG00000020403	LSG1	100	66.165	ENSLACG00000013399	LSG1	100	66.165	Latimeria_chalumnae
ENSOARG00000020403	LSG1	98	65.745	ENSLOCG00000004918	lsg1	100	65.113	Lepisosteus_oculatus
ENSOARG00000020403	LSG1	99	80.245	ENSLAFG00000012919	-	99	79.786	Loxodonta_africana
ENSOARG00000020403	LSG1	99	83.612	ENSMFAG00000039903	LSG1	99	82.246	Macaca_fascicularis
ENSOARG00000020403	LSG1	99	83.763	ENSMMUG00000010708	LSG1	99	83.612	Macaca_mulatta
ENSOARG00000020403	LSG1	99	83.763	ENSMNEG00000031538	LSG1	99	82.398	Macaca_nemestrina
ENSOARG00000020403	LSG1	99	83.763	ENSMLEG00000041184	LSG1	99	83.612	Mandrillus_leucophaeus
ENSOARG00000020403	LSG1	100	63.636	ENSMAMG00000000470	lsg1	100	63.333	Mastacembelus_armatus
ENSOARG00000020403	LSG1	100	63.855	ENSMZEG00005017865	lsg1	100	64.608	Maylandia_zebra
ENSOARG00000020403	LSG1	89	65.936	ENSMGAG00000007050	LSG1	99	65.986	Meleagris_gallopavo
ENSOARG00000020403	LSG1	91	79.766	ENSMAUG00000016976	Lsg1	93	79.564	Mesocricetus_auratus
ENSOARG00000020403	LSG1	99	82.317	ENSMICG00000049087	LSG1	99	81.860	Microcebus_murinus
ENSOARG00000020403	LSG1	99	80.763	ENSMOCG00000022136	Lsg1	99	81.374	Microtus_ochrogaster
ENSOARG00000020403	LSG1	83	74.043	ENSMMOG00000008884	lsg1	98	71.206	Mola_mola
ENSOARG00000020403	LSG1	99	59.254	ENSMODG00000019828	LSG1	99	59.119	Monodelphis_domestica
ENSOARG00000020403	LSG1	100	79.479	MGP_CAROLIEiJ_G0020648	Lsg1	100	79.939	Mus_caroli
ENSOARG00000020403	LSG1	100	79.817	ENSMUSG00000022538	Lsg1	100	80.398	Mus_musculus
ENSOARG00000020403	LSG1	98	79.814	MGP_PahariEiJ_G0016352	Lsg1	100	81.069	Mus_pahari
ENSOARG00000020403	LSG1	100	79.786	MGP_SPRETEiJ_G0021544	Lsg1	100	80.245	Mus_spretus
ENSOARG00000020403	LSG1	100	82.879	ENSMPUG00000003734	LSG1	100	82.879	Mustela_putorius_furo
ENSOARG00000020403	LSG1	100	85.780	ENSMLUG00000012548	LSG1	100	84.862	Myotis_lucifugus
ENSOARG00000020403	LSG1	99	79.908	ENSNGAG00000021872	Lsg1	99	79.755	Nannospalax_galili
ENSOARG00000020403	LSG1	99	83.612	ENSNLEG00000008293	LSG1	99	84.219	Nomascus_leucogenys
ENSOARG00000020403	LSG1	70	72.165	ENSMEUG00000009041	-	84	72.165	Notamacropus_eugenii
ENSOARG00000020403	LSG1	100	63.253	ENSONIG00000002635	lsg1	100	64.565	Oreochromis_niloticus
ENSOARG00000020403	LSG1	95	72.990	ENSOANG00000012742	LSG1	99	72.990	Ornithorhynchus_anatinus
ENSOARG00000020403	LSG1	99	82.094	ENSOCUG00000004817	LSG1	99	82.094	Oryctolagus_cuniculus
ENSOARG00000020403	LSG1	98	64.219	ENSORLG00000007695	lsg1	100	64.165	Oryzias_latipes
ENSOARG00000020403	LSG1	98	63.750	ENSORLG00020016286	lsg1	100	62.991	Oryzias_latipes_hni
ENSOARG00000020403	LSG1	98	63.750	ENSORLG00015012025	lsg1	100	63.400	Oryzias_latipes_hsok
ENSOARG00000020403	LSG1	98	63.750	ENSOMEG00000022379	lsg1	100	62.940	Oryzias_melastigma
ENSOARG00000020403	LSG1	99	82.628	ENSOGAG00000003475	LSG1	99	81.873	Otolemur_garnettii
ENSOARG00000020403	LSG1	99	84.674	ENSPPAG00000029271	LSG1	99	84.370	Pan_paniscus
ENSOARG00000020403	LSG1	100	84.384	ENSPPRG00000010281	LSG1	100	84.384	Panthera_pardus
ENSOARG00000020403	LSG1	100	85.152	ENSPTIG00000010789	LSG1	100	85.152	Panthera_tigris_altaica
ENSOARG00000020403	LSG1	99	84.522	ENSPTRG00000015760	LSG1	99	84.219	Pan_troglodytes
ENSOARG00000020403	LSG1	99	83.612	ENSPANG00000018249	LSG1	99	82.246	Papio_anubis
ENSOARG00000020403	LSG1	97	65.265	ENSPKIG00000002895	lsg1	99	65.099	Paramormyrops_kingsleyae
ENSOARG00000020403	LSG1	96	65.881	ENSPSIG00000009821	LSG1	100	65.415	Pelodiscus_sinensis
ENSOARG00000020403	LSG1	95	65.811	ENSPMGG00000000931	lsg1	100	65.650	Periophthalmus_magnuspinnatus
ENSOARG00000020403	LSG1	99	80.945	ENSPEMG00000012082	-	99	79.817	Peromyscus_maniculatus_bairdii
ENSOARG00000020403	LSG1	99	59.012	ENSPMAG00000007451	lsg1	99	58.661	Petromyzon_marinus
ENSOARG00000020403	LSG1	100	65.745	ENSPCIG00000013890	LSG1	83	67.304	Phascolarctos_cinereus
ENSOARG00000020403	LSG1	97	65.938	ENSPFOG00000021882	lsg1	99	65.152	Poecilia_formosa
ENSOARG00000020403	LSG1	97	65.000	ENSPLAG00000019536	lsg1	99	64.697	Poecilia_latipinna
ENSOARG00000020403	LSG1	97	65.265	ENSPMEG00000017281	lsg1	99	64.502	Poecilia_mexicana
ENSOARG00000020403	LSG1	97	55.215	ENSPREG00000006048	lsg1	99	53.666	Poecilia_reticulata
ENSOARG00000020403	LSG1	92	83.553	ENSPPYG00000014425	LSG1	100	83.553	Pongo_abelii
ENSOARG00000020403	LSG1	90	85.333	ENSPCAG00000005511	LSG1	90	85.333	Procavia_capensis
ENSOARG00000020403	LSG1	99	82.549	ENSPCOG00000012360	LSG1	99	83.156	Propithecus_coquereli
ENSOARG00000020403	LSG1	100	62.908	ENSPNYG00000021994	lsg1	100	63.650	Pundamilia_nyererei
ENSOARG00000020403	LSG1	100	65.257	ENSPNAG00000015533	lsg1	100	64.804	Pygocentrus_nattereri
ENSOARG00000020403	LSG1	100	79.909	ENSRNOG00000001727	Lsg1	100	80.061	Rattus_norvegicus
ENSOARG00000020403	LSG1	99	82.701	ENSRBIG00000029053	LSG1	99	83.308	Rhinopithecus_bieti
ENSOARG00000020403	LSG1	99	82.701	ENSRROG00000037702	LSG1	99	83.308	Rhinopithecus_roxellana
ENSOARG00000020403	LSG1	63	55.952	YGL099W	LSG1	71	55.952	Saccharomyces_cerevisiae
ENSOARG00000020403	LSG1	99	84.219	ENSSBOG00000034938	LSG1	99	84.825	Saimiri_boliviensis_boliviensis
ENSOARG00000020403	LSG1	78	66.604	ENSSHAG00000003487	LSG1	100	66.160	Sarcophilus_harrisii
ENSOARG00000020403	LSG1	98	64.561	ENSSFOG00015008955	lsg1	100	63.843	Scleropages_formosus
ENSOARG00000020403	LSG1	98	65.031	ENSSDUG00000004622	lsg1	100	65.053	Seriola_dumerili
ENSOARG00000020403	LSG1	98	65.116	ENSSLDG00000010869	lsg1	100	63.102	Seriola_lalandi_dorsalis
ENSOARG00000020403	LSG1	82	81.341	ENSSARG00000012981	LSG1	81	81.341	Sorex_araneus
ENSOARG00000020403	LSG1	100	67.365	ENSSPUG00000016347	LSG1	100	67.474	Sphenodon_punctatus
ENSOARG00000020403	LSG1	100	63.567	ENSSPAG00000005508	lsg1	100	63.872	Stegastes_partitus
ENSOARG00000020403	LSG1	100	87.596	ENSSSCG00000011827	LSG1	100	87.596	Sus_scrofa
ENSOARG00000020403	LSG1	89	65.159	ENSTGUG00000009068	LSG1	100	64.824	Taeniopygia_guttata
ENSOARG00000020403	LSG1	98	61.742	ENSTRUG00000017380	lsg1	100	61.162	Takifugu_rubripes
ENSOARG00000020403	LSG1	98	63.919	ENSTNIG00000015570	lsg1	100	64.060	Tetraodon_nigroviridis
ENSOARG00000020403	LSG1	100	83.792	ENSTTRG00000000559	LSG1	100	83.792	Tursiops_truncatus
ENSOARG00000020403	LSG1	100	83.333	ENSUAMG00000012454	LSG1	100	83.333	Ursus_americanus
ENSOARG00000020403	LSG1	100	83.333	ENSUMAG00000000855	LSG1	100	83.333	Ursus_maritimus
ENSOARG00000020403	LSG1	95	82.907	ENSVPAG00000012400	LSG1	100	82.907	Vicugna_pacos
ENSOARG00000020403	LSG1	95	81.659	ENSVVUG00000008956	LSG1	97	81.659	Vulpes_vulpes
ENSOARG00000020403	LSG1	100	67.273	ENSXETG00000003451	lsg1	100	67.273	Xenopus_tropicalis
ENSOARG00000020403	LSG1	97	64.431	ENSXCOG00000003239	lsg1	99	64.188	Xiphophorus_couchianus
ENSOARG00000020403	LSG1	97	64.486	ENSXMAG00000005536	lsg1	99	63.785	Xiphophorus_maculatus