EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOARG00000020532 (Gene tree)
Gene ID
-
Gene Symbol
CPSF6
Alias
-
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Ovis_aries
Status
putative
Strand
Minus strand
Length
13830 bases
Position
chr3:150487461-150501290
Accession
101114513
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOARP00000022061RRM_1PF00076.226.9e-0711
ENSOARP00000022063RRM_1PF00076.227.4e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOART00000022368CPSF6-2021716-ENSOARP00000022063571 (aa)-W5QH63
ENSOART00000022366CPSF6-2011690XM_004007445ENSOARP00000022061536 (aa)XP_014950244W5QH61
Gene Model
Click here to download ENSOARG00000020532's gene model file
Pathways
Pathway IDPathway NameSource
oas03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000020532's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOARG00000020532CPSF66051.795ENSOARG00000012937CPSF76158.286
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOARG00000020532CPSF66251.282ENSG00000149532CPSF79157.471Homo_sapiens
ENSOARG00000020532CPSF610099.813ENSG00000111605CPSF69799.475Homo_sapiens
ENSOARG00000020532CPSF610099.627ENSAMEG00000011781CPSF69799.299Ailuropoda_melanoleuca
ENSOARG00000020532CPSF65346.316ENSAOCG00000012357CPSF76943.373Amphiprion_ocellaris
ENSOARG00000020532CPSF65452.336ENSANAG00000024635CPSF76753.039Aotus_nancymaae
ENSOARG00000020532CPSF610099.813ENSANAG00000019240CPSF69999.475Aotus_nancymaae
ENSOARG00000020532CPSF65790.419ENSAMXG00000016745CPSF67190.303Astyanax_mexicanus
ENSOARG00000020532CPSF6100100.000ENSBTAG00000007323CPSF69799.650Bos_taurus
ENSOARG00000020532CPSF66051.795ENSBTAG00000015263CPSF76858.286Bos_taurus
ENSOARG00000020532CPSF610099.650ENSCJAG00000001798CPSF69799.650Callithrix_jacchus
ENSOARG00000020532CPSF66251.282ENSCJAG00000019282CPSF78057.714Callithrix_jacchus
ENSOARG00000020532CPSF610099.813ENSCAFG00000000424CPSF610099.649Canis_familiaris
ENSOARG00000020532CPSF66051.795ENSCAFG00000016152CPSF76858.857Canis_familiaris
ENSOARG00000020532CPSF66051.795ENSCAFG00020012753CPSF76858.857Canis_lupus_dingo
ENSOARG00000020532CPSF610099.813ENSCAFG00020016950CPSF69799.475Canis_lupus_dingo
ENSOARG00000020532CPSF66051.795ENSCHIG00000014655CPSF76858.286Capra_hircus
ENSOARG00000020532CPSF6100100.000ENSCHIG00000010792CPSF69799.650Capra_hircus
ENSOARG00000020532CPSF66051.795ENSTSYG00000010138-6858.857Carlito_syrichta
ENSOARG00000020532CPSF610099.813ENSTSYG00000008591CPSF69999.669Carlito_syrichta
ENSOARG00000020532CPSF65951.795ENSCAPG00000006384CPSF77058.857Cavia_aperea
ENSOARG00000020532CPSF66051.795ENSCPOG00000009980CPSF76858.857Cavia_porcellus
ENSOARG00000020532CPSF610099.813ENSCPOG00000015201CPSF69799.475Cavia_porcellus
ENSOARG00000020532CPSF610099.650ENSCCAG00000028149CPSF69799.650Cebus_capucinus
ENSOARG00000020532CPSF66051.282ENSCCAG00000032367CPSF76858.286Cebus_capucinus
ENSOARG00000020532CPSF610099.813ENSCATG00000039288CPSF69799.475Cercocebus_atys
ENSOARG00000020532CPSF66251.282ENSCATG00000042801CPSF77458.286Cercocebus_atys
ENSOARG00000020532CPSF610099.813ENSCLAG00000010149CPSF610099.649Chinchilla_lanigera
ENSOARG00000020532CPSF66051.795ENSCLAG00000003174CPSF76858.286Chinchilla_lanigera
ENSOARG00000020532CPSF610099.813ENSCSAG00000004232CPSF69799.475Chlorocebus_sabaeus
ENSOARG00000020532CPSF66251.282ENSCSAG00000006414CPSF77458.286Chlorocebus_sabaeus
ENSOARG00000020532CPSF610091.243ENSCPBG00000013322CPSF69791.243Chrysemys_picta_bellii
ENSOARG00000020532CPSF610099.813ENSCANG00000037294CPSF610099.649Colobus_angolensis_palliatus
ENSOARG00000020532CPSF610099.813ENSCGRG00001018082Cpsf69799.475Cricetulus_griseus_chok1gshd
ENSOARG00000020532CPSF66052.308ENSCGRG00001020382Cpsf76859.429Cricetulus_griseus_chok1gshd
ENSOARG00000020532CPSF610099.813ENSCGRG00000016909Cpsf610099.649Cricetulus_griseus_crigri
ENSOARG00000020532CPSF66551.152ENSCGRG00000017954Cpsf77459.429Cricetulus_griseus_crigri
ENSOARG00000020532CPSF65343.299ENSCSEG00000001956CPSF75747.552Cynoglossus_semilaevis
ENSOARG00000020532CPSF66241.818ENSCVAG00000007392CPSF76644.521Cyprinodon_variegatus
ENSOARG00000020532CPSF66051.795ENSDNOG00000018517CPSF78058.286Dasypus_novemcinctus
ENSOARG00000020532CPSF610092.995ENSDNOG00000015292CPSF69792.995Dasypus_novemcinctus
ENSOARG00000020532CPSF610099.813ENSDORG00000002950Cpsf610099.649Dipodomys_ordii
ENSOARG00000020532CPSF610092.119ENSETEG00000002097CPSF69792.119Echinops_telfairi
ENSOARG00000020532CPSF610099.813ENSEASG00005008066CPSF69799.475Equus_asinus_asinus
ENSOARG00000020532CPSF66051.795ENSEASG00005008196CPSF76858.857Equus_asinus_asinus
ENSOARG00000020532CPSF610099.813ENSECAG00000015988CPSF69799.475Equus_caballus
ENSOARG00000020532CPSF66049.451ENSECAG00000018521CPSF78758.286Equus_caballus
ENSOARG00000020532CPSF610099.067ENSEEUG00000015039CPSF610098.946Erinaceus_europaeus
ENSOARG00000020532CPSF66051.795ENSFCAG00000013677CPSF78758.286Felis_catus
ENSOARG00000020532CPSF610099.627ENSFCAG00000002855CPSF69799.299Felis_catus
ENSOARG00000020532CPSF610091.248ENSFALG00000010157CPSF610091.930Ficedula_albicollis
ENSOARG00000020532CPSF65856.452ENSFALG00000011927CPSF77258.140Ficedula_albicollis
ENSOARG00000020532CPSF66052.308ENSFDAG00000003919CPSF76854.286Fukomys_damarensis
ENSOARG00000020532CPSF610099.627ENSFDAG00000002281CPSF69799.473Fukomys_damarensis
ENSOARG00000020532CPSF65372.222ENSFHEG00000019693cpsf65070.199Fundulus_heteroclitus
ENSOARG00000020532CPSF66052.850ENSGALG00000040962CPSF76058.960Gallus_gallus
ENSOARG00000020532CPSF610091.243ENSGAGG00000010228CPSF69791.243Gopherus_agassizii
ENSOARG00000020532CPSF610099.650ENSGGOG00000008211CPSF69799.650Gorilla_gorilla
ENSOARG00000020532CPSF610099.627ENSHGLG00000000792CPSF69799.299Heterocephalus_glaber_female
ENSOARG00000020532CPSF66252.308ENSHGLG00000019090-7458.857Heterocephalus_glaber_female
ENSOARG00000020532CPSF610099.627ENSHGLG00100013861CPSF610099.473Heterocephalus_glaber_male
ENSOARG00000020532CPSF66051.795ENSSTOG00000007708CPSF76858.857Ictidomys_tridecemlineatus
ENSOARG00000020532CPSF610099.813ENSSTOG00000014133CPSF610093.322Ictidomys_tridecemlineatus
ENSOARG00000020532CPSF610099.813ENSJJAG00000014647Cpsf610099.649Jaculus_jaculus
ENSOARG00000020532CPSF66251.795ENSJJAG00000019390Cpsf77458.857Jaculus_jaculus
ENSOARG00000020532CPSF65246.392ENSLBEG00000000947CPSF76737.838Labrus_bergylta
ENSOARG00000020532CPSF65847.541ENSLACG00000005542CPSF76944.231Latimeria_chalumnae
ENSOARG00000020532CPSF66195.294ENSLOCG00000016190cpsf66395.294Lepisosteus_oculatus
ENSOARG00000020532CPSF610093.170ENSLAFG00000030413CPSF69793.170Loxodonta_africana
ENSOARG00000020532CPSF610099.650ENSMFAG00000045318CPSF69799.650Macaca_fascicularis
ENSOARG00000020532CPSF66051.282ENSMFAG00000001401CPSF76858.286Macaca_fascicularis
ENSOARG00000020532CPSF610099.650ENSMMUG00000002921CPSF69799.650Macaca_mulatta
ENSOARG00000020532CPSF66251.282ENSMMUG00000015280CPSF77458.286Macaca_mulatta
ENSOARG00000020532CPSF610099.650ENSMNEG00000036311CPSF69799.650Macaca_nemestrina
ENSOARG00000020532CPSF66251.282ENSMNEG00000029585CPSF77458.286Macaca_nemestrina
ENSOARG00000020532CPSF610099.813ENSMLEG00000003957CPSF610099.649Mandrillus_leucophaeus
ENSOARG00000020532CPSF66051.282ENSMLEG00000031269CPSF76858.286Mandrillus_leucophaeus
ENSOARG00000020532CPSF69242.515ENSMGAG00000004876CPSF75958.084Meleagris_gallopavo
ENSOARG00000020532CPSF610088.268ENSMGAG00000010552CPSF69789.104Meleagris_gallopavo
ENSOARG00000020532CPSF66051.795ENSMAUG00000013020Cpsf76858.857Mesocricetus_auratus
ENSOARG00000020532CPSF610099.813ENSMAUG00000013240Cpsf69799.475Mesocricetus_auratus
ENSOARG00000020532CPSF66051.795ENSMICG00000013788CPSF76858.857Microcebus_murinus
ENSOARG00000020532CPSF610099.813ENSMICG00000007385-9799.475Microcebus_murinus
ENSOARG00000020532CPSF66051.795ENSMOCG00000000072Cpsf76858.857Microtus_ochrogaster
ENSOARG00000020532CPSF610099.813ENSMOCG00000013982Cpsf69799.475Microtus_ochrogaster
ENSOARG00000020532CPSF610092.469ENSMODG00000007123CPSF69792.469Monodelphis_domestica
ENSOARG00000020532CPSF66989.175ENSMALG00000014908cpsf67589.326Monopterus_albus
ENSOARG00000020532CPSF610099.813MGP_CAROLIEiJ_G0015834Cpsf69799.475Mus_caroli
ENSOARG00000020532CPSF66051.795MGP_CAROLIEiJ_G0022690Cpsf76858.857Mus_caroli
ENSOARG00000020532CPSF66051.795ENSMUSG00000034820Cpsf76858.857Mus_musculus
ENSOARG00000020532CPSF610099.440ENSMUSG00000055531Cpsf69799.124Mus_musculus
ENSOARG00000020532CPSF66051.795MGP_PahariEiJ_G0014184Cpsf76858.857Mus_pahari
ENSOARG00000020532CPSF68299.010MGP_PahariEiJ_G0031253Cpsf68491.106Mus_pahari
ENSOARG00000020532CPSF610099.440MGP_SPRETEiJ_G0016657Cpsf69799.124Mus_spretus
ENSOARG00000020532CPSF66051.795MGP_SPRETEiJ_G0023604Cpsf76858.857Mus_spretus
ENSOARG00000020532CPSF610091.594ENSMPUG00000017502CPSF69791.594Mustela_putorius_furo
ENSOARG00000020532CPSF65950.769ENSMPUG00000014163CPSF76657.714Mustela_putorius_furo
ENSOARG00000020532CPSF66784.783ENSMLUG00000023960-7783.871Myotis_lucifugus
ENSOARG00000020532CPSF610091.419ENSMLUG00000004172-9791.419Myotis_lucifugus
ENSOARG00000020532CPSF67494.928ENSMLUG00000028728-8979.518Myotis_lucifugus
ENSOARG00000020532CPSF66251.795ENSMLUG00000013278CPSF77458.857Myotis_lucifugus
ENSOARG00000020532CPSF610099.813ENSNGAG00000015901Cpsf69799.475Nannospalax_galili
ENSOARG00000020532CPSF66051.795ENSNGAG00000005031Cpsf76858.857Nannospalax_galili
ENSOARG00000020532CPSF66051.282ENSNLEG00000002529CPSF76258.286Nomascus_leucogenys
ENSOARG00000020532CPSF610099.475ENSNLEG00000003798CPSF69799.475Nomascus_leucogenys
ENSOARG00000020532CPSF610096.082ENSMEUG00000015041CPSF69795.972Notamacropus_eugenii
ENSOARG00000020532CPSF66054.082ENSMEUG00000002261CPSF76858.721Notamacropus_eugenii
ENSOARG00000020532CPSF610099.627ENSOPRG00000005199CPSF610099.473Ochotona_princeps
ENSOARG00000020532CPSF610091.419ENSODEG00000018399-9791.419Octodon_degus
ENSOARG00000020532CPSF67287.879ENSODEG00000007109-6680.576Octodon_degus
ENSOARG00000020532CPSF66049.495ENSODEG00000002610CPSF76856.180Octodon_degus
ENSOARG00000020532CPSF67799.598ENSODEG00000004418-9099.435Octodon_degus
ENSOARG00000020532CPSF67384.615ENSONIG00000011702cpsf68584.942Oreochromis_niloticus
ENSOARG00000020532CPSF610099.813ENSOCUG00000013505CPSF69799.475Oryctolagus_cuniculus
ENSOARG00000020532CPSF69739.813ENSOCUG00000024726CPSF76858.286Oryctolagus_cuniculus
ENSOARG00000020532CPSF66642.391ENSORLG00000006495CPSF75549.558Oryzias_latipes
ENSOARG00000020532CPSF66542.391ENSORLG00020012657CPSF75549.558Oryzias_latipes_hni
ENSOARG00000020532CPSF66838.028ENSOMEG00000000539CPSF77037.037Oryzias_melastigma
ENSOARG00000020532CPSF66051.795ENSOGAG00000027958CPSF76358.857Otolemur_garnettii
ENSOARG00000020532CPSF610090.503ENSOGAG00000031988CPSF610091.228Otolemur_garnettii
ENSOARG00000020532CPSF610097.198ENSPPAG00000005301CPSF69897.198Pan_paniscus
ENSOARG00000020532CPSF66051.282ENSPPAG00000028232CPSF77058.286Pan_paniscus
ENSOARG00000020532CPSF66051.795ENSPPRG00000008538CPSF76858.857Panthera_pardus
ENSOARG00000020532CPSF610099.627ENSPPRG00000021620CPSF69799.299Panthera_pardus
ENSOARG00000020532CPSF610099.627ENSPTIG00000004079CPSF610099.627Panthera_tigris_altaica
ENSOARG00000020532CPSF66051.795ENSPTIG00000021699CPSF76858.857Panthera_tigris_altaica
ENSOARG00000020532CPSF610099.650ENSPTRG00000005205CPSF69799.650Pan_troglodytes
ENSOARG00000020532CPSF66051.282ENSPTRG00000003742CPSF77058.286Pan_troglodytes
ENSOARG00000020532CPSF610099.813ENSPANG00000011641CPSF69799.475Papio_anubis
ENSOARG00000020532CPSF66051.282ENSPANG00000006037CPSF76858.286Papio_anubis
ENSOARG00000020532CPSF65548.023ENSPKIG00000018054CPSF77544.681Paramormyrops_kingsleyae
ENSOARG00000020532CPSF66494.512ENSPSIG00000016360CPSF67694.512Pelodiscus_sinensis
ENSOARG00000020532CPSF610099.627ENSPEMG00000007973Cpsf610099.473Peromyscus_maniculatus_bairdii
ENSOARG00000020532CPSF66251.795ENSPEMG00000012648Cpsf77458.857Peromyscus_maniculatus_bairdii
ENSOARG00000020532CPSF66346.729ENSPCIG00000002551CPSF78056.284Phascolarctos_cinereus
ENSOARG00000020532CPSF610099.067ENSPCIG00000019063CPSF69798.774Phascolarctos_cinereus
ENSOARG00000020532CPSF68284.884ENSPFOG00000006990cpsf65381.853Poecilia_formosa
ENSOARG00000020532CPSF65372.222ENSPMEG00000001353cpsf65069.868Poecilia_mexicana
ENSOARG00000020532CPSF66051.282ENSPPYG00000003188CPSF76858.286Pongo_abelii
ENSOARG00000020532CPSF610092.995ENSPPYG00000004756CPSF69792.995Pongo_abelii
ENSOARG00000020532CPSF610099.813ENSPCAG00000011574CPSF69799.475Procavia_capensis
ENSOARG00000020532CPSF66051.795ENSPCOG00000011976CPSF76858.857Propithecus_coquereli
ENSOARG00000020532CPSF610099.475ENSPCOG00000024384CPSF69799.475Propithecus_coquereli
ENSOARG00000020532CPSF610099.254ENSPVAG00000015753CPSF69798.949Pteropus_vampyrus
ENSOARG00000020532CPSF66051.795ENSPVAG00000010675CPSF76858.857Pteropus_vampyrus
ENSOARG00000020532CPSF65246.497ENSPNAG00000015073CPSF76847.879Pygocentrus_nattereri
ENSOARG00000020532CPSF66251.282ENSRNOG00000020668Cpsf77458.721Rattus_norvegicus
ENSOARG00000020532CPSF610092.995ENSRNOG00000005927Cpsf69792.995Rattus_norvegicus
ENSOARG00000020532CPSF66251.282ENSRBIG00000031429CPSF78757.714Rhinopithecus_bieti
ENSOARG00000020532CPSF610099.475ENSRBIG00000042827CPSF69799.475Rhinopithecus_bieti
ENSOARG00000020532CPSF66051.282ENSRROG00000045009CPSF76858.286Rhinopithecus_roxellana
ENSOARG00000020532CPSF610099.627ENSRROG00000042758CPSF69799.299Rhinopithecus_roxellana
ENSOARG00000020532CPSF610099.825ENSSBOG00000010652CPSF610099.813Saimiri_boliviensis_boliviensis
ENSOARG00000020532CPSF66051.282ENSSBOG00000018431CPSF76858.286Saimiri_boliviensis_boliviensis
ENSOARG00000020532CPSF66841.176ENSSFOG00015010288cpsf77340.659Scleropages_formosus
ENSOARG00000020532CPSF69492.079ENSSARG00000006743CPSF68692.079Sorex_araneus
ENSOARG00000020532CPSF66052.604ENSSPUG00000019344CPSF76955.233Sphenodon_punctatus
ENSOARG00000020532CPSF66051.795ENSSSCG00000013083CPSF78058.286Sus_scrofa
ENSOARG00000020532CPSF610099.813ENSSSCG00000038031CPSF610099.813Sus_scrofa
ENSOARG00000020532CPSF65754.444ENSTGUG00000006513CPSF76855.747Taeniopygia_guttata
ENSOARG00000020532CPSF66051.795ENSUAMG00000017809CPSF76858.857Ursus_americanus
ENSOARG00000020532CPSF610093.097ENSUAMG00000023492CPSF610093.097Ursus_americanus
ENSOARG00000020532CPSF66251.795ENSUMAG00000011825CPSF77458.857Ursus_maritimus
ENSOARG00000020532CPSF610099.813ENSUMAG00000020779CPSF610099.813Ursus_maritimus
ENSOARG00000020532CPSF610099.813ENSVPAG00000008469CPSF610099.649Vicugna_pacos
ENSOARG00000020532CPSF610099.813ENSVVUG00000010156-10099.813Vulpes_vulpes
ENSOARG00000020532CPSF66051.795ENSVVUG00000004939CPSF78058.286Vulpes_vulpes
ENSOARG00000020532CPSF69639.324ENSXETG00000006715cpsf76252.663Xenopus_tropicalis

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