EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000020709 (Gene tree)
Gene ID: 101107846
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 8428 bases
Position: chr2:232307555-232315982
Accession: 101107846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000022257	RRM_1	PF00076.22	3.1e-59	1	4
ENSOARP00000022257	RRM_1	PF00076.22	3.1e-59	2	4
ENSOARP00000022257	RRM_1	PF00076.22	3.1e-59	3	4
ENSOARP00000022257	RRM_1	PF00076.22	3.1e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000022562	-	2331	XM_004023151	ENSOARP00000022257	677 (aa)	XP_004023200	W5QHQ7

Gene Model

Click here to download ENSOARG00000020709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000020709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000020709	-	86	82.393	ENSOARG00000013710	-	94	83.419
ENSOARG00000020709	-	75	89.691	ENSOARG00000013270	-	99	94.505
ENSOARG00000020709	-	52	30.726	ENSOARG00000000095	PABPC1	53	30.726
ENSOARG00000020709	-	89	75.207	ENSOARG00000004072	-	92	74.106
ENSOARG00000020709	-	50	31.319	ENSOARG00000019709	TIA1	75	30.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000020709	-	65	89.640	ENSG00000115053	NCL	93	87.770	Homo_sapiens
ENSOARG00000020709	-	56	97.120	ENSAMEG00000016289	NCL	91	83.612	Ailuropoda_melanoleuca
ENSOARG00000020709	-	56	95.288	ENSANAG00000035814	-	91	81.364	Aotus_nancymaae
ENSOARG00000020709	-	99	65.335	ENSANAG00000024378	-	98	67.424	Aotus_nancymaae
ENSOARG00000020709	-	99	83.582	ENSBTAG00000051320	-	95	85.978	Bos_taurus
ENSOARG00000020709	-	75	91.093	ENSBTAG00000050728	-	85	91.093	Bos_taurus
ENSOARG00000020709	-	92	89.378	ENSBTAG00000016174	NCL	91	89.378	Bos_taurus
ENSOARG00000020709	-	63	91.391	ENSBTAG00000026909	-	97	91.391	Bos_taurus
ENSOARG00000020709	-	56	95.288	ENSCJAG00000013538	NCL	91	80.060	Callithrix_jacchus
ENSOARG00000020709	-	92	82.121	ENSCAFG00000011037	NCL	91	83.182	Canis_familiaris
ENSOARG00000020709	-	86	84.718	ENSCAFG00020023145	NCL	87	84.718	Canis_lupus_dingo
ENSOARG00000020709	-	92	96.943	ENSCHIG00000021052	-	55	96.943	Capra_hircus
ENSOARG00000020709	-	92	80.455	ENSCHIG00000026149	-	92	82.576	Capra_hircus
ENSOARG00000020709	-	94	94.545	ENSCHIG00000010894	-	98	94.385	Capra_hircus
ENSOARG00000020709	-	92	73.406	ENSCHIG00000012143	-	91	77.605	Capra_hircus
ENSOARG00000020709	-	92	80.035	ENSTSYG00000029779	-	98	78.720	Carlito_syrichta
ENSOARG00000020709	-	75	81.119	ENSTSYG00000036886	-	91	71.207	Carlito_syrichta
ENSOARG00000020709	-	92	81.873	ENSTSYG00000004355	-	91	78.852	Carlito_syrichta
ENSOARG00000020709	-	56	86.911	ENSCAPG00000009405	NCL	91	74.233	Cavia_aperea
ENSOARG00000020709	-	56	91.885	ENSCPOG00000001034	NCL	91	77.454	Cavia_porcellus
ENSOARG00000020709	-	56	95.288	ENSCCAG00000021040	-	91	82.137	Cebus_capucinus
ENSOARG00000020709	-	92	80.880	ENSCATG00000037033	NCL	91	82.853	Cercocebus_atys
ENSOARG00000020709	-	92	77.307	ENSCLAG00000013080	NCL	91	77.217	Chinchilla_lanigera
ENSOARG00000020709	-	65	95.034	ENSCSAG00000006660	NCL	95	95.034	Chlorocebus_sabaeus
ENSOARG00000020709	-	64	77.189	ENSCHOG00000012860	NCL	88	77.064	Choloepus_hoffmanni
ENSOARG00000020709	-	92	66.614	ENSCGRG00001022350	-	94	62.712	Cricetulus_griseus_chok1gshd
ENSOARG00000020709	-	92	75.573	ENSCGRG00001024315	-	90	73.820	Cricetulus_griseus_chok1gshd
ENSOARG00000020709	-	86	74.038	ENSCGRG00000017894	-	85	73.927	Cricetulus_griseus_crigri
ENSOARG00000020709	-	92	63.735	ENSCGRG00000000507	-	62	72.665	Cricetulus_griseus_crigri
ENSOARG00000020709	-	92	73.806	ENSDNOG00000046347	-	90	74.268	Dasypus_novemcinctus
ENSOARG00000020709	-	92	79.939	ENSDNOG00000010783	-	91	81.003	Dasypus_novemcinctus
ENSOARG00000020709	-	56	84.031	ENSDORG00000012513	-	90	73.853	Dipodomys_ordii
ENSOARG00000020709	-	55	73.171	ENSDORG00000023596	-	92	67.028	Dipodomys_ordii
ENSOARG00000020709	-	57	90.078	ENSETEG00000018937	-	62	85.650	Echinops_telfairi
ENSOARG00000020709	-	91	52.202	ENSETEG00000008139	-	64	66.220	Echinops_telfairi
ENSOARG00000020709	-	56	89.737	ENSETEG00000014756	-	86	89.791	Echinops_telfairi
ENSOARG00000020709	-	65	60.860	ENSETEG00000008553	-	88	61.416	Echinops_telfairi
ENSOARG00000020709	-	90	83.821	ENSEASG00005008488	NCL	91	84.438	Equus_asinus_asinus
ENSOARG00000020709	-	92	84.219	ENSECAG00000021868	NCL	91	84.370	Equus_caballus
ENSOARG00000020709	-	56	89.529	ENSEEUG00000005913	NCL	62	86.301	Erinaceus_europaeus
ENSOARG00000020709	-	92	82.753	ENSFCAG00000027622	NCL	91	82.905	Felis_catus
ENSOARG00000020709	-	92	78.550	ENSFDAG00000014291	NCL	92	74.924	Fukomys_damarensis
ENSOARG00000020709	-	92	78.333	ENSGGOG00000004300	NCL	91	79.848	Gorilla_gorilla
ENSOARG00000020709	-	56	84.960	ENSHGLG00000011069	-	62	80.778	Heterocephalus_glaber_female
ENSOARG00000020709	-	53	81.614	ENSHGLG00000005133	-	68	74.296	Heterocephalus_glaber_female
ENSOARG00000020709	-	56	93.717	ENSHGLG00000002031	-	62	89.140	Heterocephalus_glaber_female
ENSOARG00000020709	-	56	93.455	ENSHGLG00100014537	-	62	89.726	Heterocephalus_glaber_male
ENSOARG00000020709	-	56	83.862	ENSHGLG00100000745	-	59	83.947	Heterocephalus_glaber_male
ENSOARG00000020709	-	56	81.414	ENSJJAG00000016165	Ncl	91	73.272	Jaculus_jaculus
ENSOARG00000020709	-	92	68.682	ENSLAFG00000013061	NCL	84	77.449	Loxodonta_africana
ENSOARG00000020709	-	92	81.212	ENSMFAG00000040385	NCL	91	83.333	Macaca_fascicularis
ENSOARG00000020709	-	92	81.212	ENSMMUG00000018094	NCL	91	83.333	Macaca_mulatta
ENSOARG00000020709	-	65	90.090	ENSMNEG00000023839	NCL	64	90.991	Macaca_nemestrina
ENSOARG00000020709	-	92	81.032	ENSMLEG00000028935	NCL	91	83.005	Mandrillus_leucophaeus
ENSOARG00000020709	-	65	71.005	ENSMICG00000029975	-	88	77.291	Microcebus_murinus
ENSOARG00000020709	-	92	80.425	ENSMICG00000002538	-	91	79.211	Microcebus_murinus
ENSOARG00000020709	-	92	74.074	MGP_CAROLIEiJ_G0014362	Ncl	61	82.877	Mus_caroli
ENSOARG00000020709	-	92	73.652	ENSMUSG00000026234	Ncl	61	82.232	Mus_musculus
ENSOARG00000020709	-	92	73.313	MGP_PahariEiJ_G0027599	Ncl	61	82.151	Mus_pahari
ENSOARG00000020709	-	92	73.966	MGP_SPRETEiJ_G0015164	Ncl	61	83.105	Mus_spretus
ENSOARG00000020709	-	92	80.873	ENSMLUG00000014547	NCL	91	81.325	Myotis_lucifugus
ENSOARG00000020709	-	56	73.158	ENSNGAG00000006188	-	54	72.251	Nannospalax_galili
ENSOARG00000020709	-	92	75.994	ENSNGAG00000002454	-	91	75.994	Nannospalax_galili
ENSOARG00000020709	-	73	75.610	ENSODEG00000002441	-	96	76.531	Octodon_degus
ENSOARG00000020709	-	56	63.356	ENSODEG00000007803	-	55	62.857	Octodon_degus
ENSOARG00000020709	-	77	89.245	ENSODEG00000002748	-	74	84.756	Octodon_degus
ENSOARG00000020709	-	56	89.737	ENSODEG00000003281	-	90	75.655	Octodon_degus
ENSOARG00000020709	-	73	86.387	ENSOGAG00000027852	NCL	76	86.387	Otolemur_garnettii
ENSOARG00000020709	-	65	90.766	ENSPPAG00000011619	NCL	91	80.303	Pan_paniscus
ENSOARG00000020709	-	92	83.030	ENSPPRG00000012603	NCL	91	83.182	Panthera_pardus
ENSOARG00000020709	-	92	83.030	ENSPTIG00000010393	NCL	91	83.485	Panthera_tigris_altaica
ENSOARG00000020709	-	92	77.912	ENSPTRG00000013025	NCL	91	79.879	Pan_troglodytes
ENSOARG00000020709	-	92	81.212	ENSPANG00000010292	NCL	91	83.333	Papio_anubis
ENSOARG00000020709	-	65	80.580	ENSPPYG00000013265	NCL	91	74.174	Pongo_abelii
ENSOARG00000020709	-	91	76.625	ENSPCOG00000004160	-	85	89.501	Propithecus_coquereli
ENSOARG00000020709	-	92	81.997	ENSPCOG00000003051	-	62	92.308	Propithecus_coquereli
ENSOARG00000020709	-	92	84.018	ENSPVAG00000000297	NCL	91	83.409	Pteropus_vampyrus
ENSOARG00000020709	-	92	75.345	ENSRNOG00000018273	Ncl	91	74.579	Rattus_norvegicus
ENSOARG00000020709	-	65	95.205	ENSRBIG00000035396	-	80	93.355	Rhinopithecus_bieti
ENSOARG00000020709	-	92	76.758	ENSRBIG00000037525	-	63	88.514	Rhinopithecus_bieti
ENSOARG00000020709	-	99	76.752	ENSRROG00000036103	-	98	79.936	Rhinopithecus_roxellana
ENSOARG00000020709	-	92	80.758	ENSRROG00000028756	-	91	82.273	Rhinopithecus_roxellana
ENSOARG00000020709	-	68	86.649	ENSSBOG00000027549	-	82	86.649	Saimiri_boliviensis_boliviensis
ENSOARG00000020709	-	67	72.973	ENSSBOG00000023094	-	78	73.214	Saimiri_boliviensis_boliviensis
ENSOARG00000020709	-	56	95.026	ENSSBOG00000029193	-	91	78.884	Saimiri_boliviensis_boliviensis
ENSOARG00000020709	-	92	82.132	ENSSSCG00000016275	NCL	91	82.282	Sus_scrofa
ENSOARG00000020709	-	56	82.984	ENSTBEG00000001546	-	82	76.047	Tupaia_belangeri
ENSOARG00000020709	-	73	75.000	ENSTBEG00000002469	-	73	74.755	Tupaia_belangeri
ENSOARG00000020709	-	92	82.774	ENSTTRG00000009094	NCL	91	82.165	Tursiops_truncatus
ENSOARG00000020709	-	70	96.606	ENSUAMG00000005639	NCL	88	91.256	Ursus_americanus
ENSOARG00000020709	-	56	96.859	ENSUMAG00000015789	NCL	91	84.018	Ursus_maritimus
ENSOARG00000020709	-	68	82.759	ENSVPAG00000001796	NCL	70	82.759	Vicugna_pacos
ENSOARG00000020709	-	92	81.567	ENSVVUG00000025564	NCL	60	90.389	Vulpes_vulpes