EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000000354 (Gene tree)
Gene ID: 100351447
Gene Symbol: RPP40
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 12187 bases
Position: chrGL018715:955395-967581
Accession: 100351447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000000313	Ribonuc_P_40	PF08584.11	3.7e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000000354	RPP40-201	1432	-	ENSOCUP00000000313	363 (aa)	XP_002721007	G1SD45

Gene Model

Click here to download ENSOCUG00000000354's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000000354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000000354	RPP40	99	76.177	ENSG00000124787	RPP40	98	78.859	Homo_sapiens
ENSOCUG00000000354	RPP40	88	31.562	ENSAPOG00000008660	rpp40	91	31.562	Acanthochromis_polyacanthus
ENSOCUG00000000354	RPP40	99	77.285	ENSAMEG00000012938	RPP40	99	77.285	Ailuropoda_melanoleuca
ENSOCUG00000000354	RPP40	98	37.326	ENSACIG00000003617	rpp40	98	37.326	Amphilophus_citrinellus
ENSOCUG00000000354	RPP40	98	39.718	ENSAOCG00000011846	rpp40	98	39.718	Amphiprion_ocellaris
ENSOCUG00000000354	RPP40	98	39.718	ENSAPEG00000001322	rpp40	98	39.718	Amphiprion_percula
ENSOCUG00000000354	RPP40	98	41.457	ENSATEG00000006584	rpp40	98	41.457	Anabas_testudineus
ENSOCUG00000000354	RPP40	83	62.458	ENSAPLG00000005691	RPP40	99	62.458	Anas_platyrhynchos
ENSOCUG00000000354	RPP40	99	58.380	ENSACAG00000006550	RPP40	88	58.380	Anolis_carolinensis
ENSOCUG00000000354	RPP40	99	74.515	ENSANAG00000029246	RPP40	99	74.515	Aotus_nancymaae
ENSOCUG00000000354	RPP40	98	39.718	ENSACLG00000015883	rpp40	96	39.718	Astatotilapia_calliptera
ENSOCUG00000000354	RPP40	98	44.507	ENSAMXG00000001755	rpp40	98	44.507	Astyanax_mexicanus
ENSOCUG00000000354	RPP40	99	73.961	ENSBTAG00000003332	RPP40	99	73.961	Bos_taurus
ENSOCUG00000000354	RPP40	99	75.069	ENSCJAG00000021373	RPP40	99	75.069	Callithrix_jacchus
ENSOCUG00000000354	RPP40	99	75.900	ENSCAFG00000009435	RPP40	99	75.900	Canis_familiaris
ENSOCUG00000000354	RPP40	99	75.900	ENSCAFG00020013380	RPP40	99	75.900	Canis_lupus_dingo
ENSOCUG00000000354	RPP40	99	72.576	ENSCHIG00000016849	RPP40	99	73.333	Capra_hircus
ENSOCUG00000000354	RPP40	99	76.177	ENSTSYG00000032857	RPP40	99	78.667	Carlito_syrichta
ENSOCUG00000000354	RPP40	90	69.538	ENSCAPG00000004957	RPP40	97	69.538	Cavia_aperea
ENSOCUG00000000354	RPP40	99	74.515	ENSCPOG00000005855	RPP40	99	74.515	Cavia_porcellus
ENSOCUG00000000354	RPP40	99	74.792	ENSCCAG00000019809	RPP40	99	74.792	Cebus_capucinus
ENSOCUG00000000354	RPP40	99	75.900	ENSCATG00000038787	RPP40	99	75.900	Cercocebus_atys
ENSOCUG00000000354	RPP40	99	75.346	ENSCLAG00000003235	RPP40	99	75.346	Chinchilla_lanigera
ENSOCUG00000000354	RPP40	99	75.623	ENSCSAG00000007307	RPP40	99	75.623	Chlorocebus_sabaeus
ENSOCUG00000000354	RPP40	68	63.306	ENSCHOG00000005856	-	99	63.306	Choloepus_hoffmanni
ENSOCUG00000000354	RPP40	99	63.687	ENSCPBG00000009003	RPP40	98	63.687	Chrysemys_picta_bellii
ENSOCUG00000000354	RPP40	99	76.177	ENSCANG00000033965	RPP40	99	76.177	Colobus_angolensis_palliatus
ENSOCUG00000000354	RPP40	99	70.360	ENSCGRG00001018328	Rpp40	99	70.360	Cricetulus_griseus_chok1gshd
ENSOCUG00000000354	RPP40	99	70.360	ENSCGRG00000011344	Rpp40	99	70.360	Cricetulus_griseus_crigri
ENSOCUG00000000354	RPP40	97	37.853	ENSCSEG00000015006	-	98	37.853	Cynoglossus_semilaevis
ENSOCUG00000000354	RPP40	74	33.696	ENSCVAG00000012169	rpp40	99	33.696	Cyprinodon_variegatus
ENSOCUG00000000354	RPP40	98	47.619	ENSDARG00000017605	rpp40	99	47.619	Danio_rerio
ENSOCUG00000000354	RPP40	82	72.391	ENSDNOG00000048136	RPP40	99	72.391	Dasypus_novemcinctus
ENSOCUG00000000354	RPP40	99	56.568	ENSDORG00000011196	-	99	56.568	Dipodomys_ordii
ENSOCUG00000000354	RPP40	99	74.792	ENSDORG00000029944	-	99	74.792	Dipodomys_ordii
ENSOCUG00000000354	RPP40	99	59.003	ENSETEG00000007458	RPP40	99	59.003	Echinops_telfairi
ENSOCUG00000000354	RPP40	98	43.258	ENSEBUG00000000386	rpp40	99	44.410	Eptatretus_burgeri
ENSOCUG00000000354	RPP40	99	77.008	ENSEASG00005012116	RPP40	80	77.008	Equus_asinus_asinus
ENSOCUG00000000354	RPP40	99	77.008	ENSECAG00000017247	RPP40	80	77.008	Equus_caballus
ENSOCUG00000000354	RPP40	82	57.576	ENSEEUG00000012087	RPP40	100	57.576	Erinaceus_europaeus
ENSOCUG00000000354	RPP40	98	48.315	ENSELUG00000017004	rpp40	98	48.315	Esox_lucius
ENSOCUG00000000354	RPP40	99	76.177	ENSFCAG00000009249	RPP40	99	76.177	Felis_catus
ENSOCUG00000000354	RPP40	86	60.615	ENSFALG00000013166	RPP40	99	60.615	Ficedula_albicollis
ENSOCUG00000000354	RPP40	99	76.731	ENSFDAG00000013001	-	99	76.731	Fukomys_damarensis
ENSOCUG00000000354	RPP40	80	64.041	ENSFDAG00000000265	-	99	64.041	Fukomys_damarensis
ENSOCUG00000000354	RPP40	98	41.690	ENSFHEG00000021429	rpp40	88	41.690	Fundulus_heteroclitus
ENSOCUG00000000354	RPP40	88	40.938	ENSGMOG00000018653	rpp40	99	40.938	Gadus_morhua
ENSOCUG00000000354	RPP40	99	58.939	ENSGALG00000036074	RPP40	98	58.939	Gallus_gallus
ENSOCUG00000000354	RPP40	82	34.122	ENSGAFG00000004189	-	97	34.122	Gambusia_affinis
ENSOCUG00000000354	RPP40	98	39.718	ENSGACG00000002472	rpp40	98	39.718	Gasterosteus_aculeatus
ENSOCUG00000000354	RPP40	99	63.966	ENSGAGG00000012918	RPP40	98	63.966	Gopherus_agassizii
ENSOCUG00000000354	RPP40	99	76.454	ENSGGOG00000013764	RPP40	99	76.454	Gorilla_gorilla
ENSOCUG00000000354	RPP40	94	38.235	ENSHBUG00000009378	rpp40	97	38.235	Haplochromis_burtoni
ENSOCUG00000000354	RPP40	99	74.515	ENSHGLG00000004871	RPP40	99	74.515	Heterocephalus_glaber_female
ENSOCUG00000000354	RPP40	99	74.515	ENSHGLG00100002080	RPP40	99	74.515	Heterocephalus_glaber_male
ENSOCUG00000000354	RPP40	97	33.051	ENSHCOG00000013264	-	94	33.051	Hippocampus_comes
ENSOCUG00000000354	RPP40	98	44.789	ENSIPUG00000008951	RPP40	98	44.789	Ictalurus_punctatus
ENSOCUG00000000354	RPP40	99	73.961	ENSSTOG00000011199	RPP40	99	73.961	Ictidomys_tridecemlineatus
ENSOCUG00000000354	RPP40	99	70.360	ENSJJAG00000020629	Rpp40	99	70.360	Jaculus_jaculus
ENSOCUG00000000354	RPP40	98	38.873	ENSKMAG00000019358	rpp40	98	38.873	Kryptolebias_marmoratus
ENSOCUG00000000354	RPP40	98	40.282	ENSLBEG00000022724	rpp40	98	40.282	Labrus_bergylta
ENSOCUG00000000354	RPP40	99	54.749	ENSLACG00000014848	RPP40	99	54.749	Latimeria_chalumnae
ENSOCUG00000000354	RPP40	99	51.524	ENSLOCG00000011650	rpp40	99	51.524	Lepisosteus_oculatus
ENSOCUG00000000354	RPP40	83	76.667	ENSLAFG00000007530	RPP40	99	76.667	Loxodonta_africana
ENSOCUG00000000354	RPP40	99	75.900	ENSMFAG00000043100	RPP40	99	75.900	Macaca_fascicularis
ENSOCUG00000000354	RPP40	99	75.900	ENSMMUG00000004966	RPP40	99	75.900	Macaca_mulatta
ENSOCUG00000000354	RPP40	99	75.900	ENSMNEG00000041986	RPP40	99	78.000	Macaca_nemestrina
ENSOCUG00000000354	RPP40	98	67.042	ENSMLEG00000040851	RPP40	99	72.989	Mandrillus_leucophaeus
ENSOCUG00000000354	RPP40	98	41.127	ENSMAMG00000019551	rpp40	98	41.127	Mastacembelus_armatus
ENSOCUG00000000354	RPP40	99	39.833	ENSMZEG00005019475	rpp40	99	39.833	Maylandia_zebra
ENSOCUG00000000354	RPP40	88	62.813	ENSMGAG00000004009	RPP40	89	62.813	Meleagris_gallopavo
ENSOCUG00000000354	RPP40	99	72.576	ENSMAUG00000010268	Rpp40	99	72.576	Mesocricetus_auratus
ENSOCUG00000000354	RPP40	99	77.839	ENSMICG00000003297	RPP40	99	71.745	Microcebus_murinus
ENSOCUG00000000354	RPP40	99	73.961	ENSMOCG00000000305	Rpp40	99	73.961	Microtus_ochrogaster
ENSOCUG00000000354	RPP40	98	33.521	ENSMMOG00000020591	-	98	33.521	Mola_mola
ENSOCUG00000000354	RPP40	99	70.718	ENSMODG00000009826	RPP40	99	70.718	Monodelphis_domestica
ENSOCUG00000000354	RPP40	98	40.000	ENSMALG00000020133	rpp40	98	40.000	Monopterus_albus
ENSOCUG00000000354	RPP40	99	74.238	MGP_CAROLIEiJ_G0018429	Rpp40	99	74.238	Mus_caroli
ENSOCUG00000000354	RPP40	99	74.238	ENSMUSG00000021418	Rpp40	99	74.238	Mus_musculus
ENSOCUG00000000354	RPP40	99	73.130	MGP_PahariEiJ_G0019497	Rpp40	99	73.130	Mus_pahari
ENSOCUG00000000354	RPP40	99	73.684	MGP_SPRETEiJ_G0019309	Rpp40	99	73.684	Mus_spretus
ENSOCUG00000000354	RPP40	99	77.008	ENSMPUG00000000530	RPP40	93	77.008	Mustela_putorius_furo
ENSOCUG00000000354	RPP40	99	75.623	ENSMLUG00000000501	RPP40	99	75.623	Myotis_lucifugus
ENSOCUG00000000354	RPP40	99	73.407	ENSNGAG00000023955	-	99	73.407	Nannospalax_galili
ENSOCUG00000000354	RPP40	95	64.451	ENSNGAG00000022529	-	100	64.451	Nannospalax_galili
ENSOCUG00000000354	RPP40	87	35.202	ENSNBRG00000017465	rpp40	86	35.168	Neolamprologus_brichardi
ENSOCUG00000000354	RPP40	99	75.623	ENSNLEG00000034397	RPP40	99	75.623	Nomascus_leucogenys
ENSOCUG00000000354	RPP40	99	64.543	ENSMEUG00000005300	RPP40	99	64.543	Notamacropus_eugenii
ENSOCUG00000000354	RPP40	99	68.698	ENSODEG00000018153	-	99	68.698	Octodon_degus
ENSOCUG00000000354	RPP40	99	73.684	ENSODEG00000007255	-	99	73.684	Octodon_degus
ENSOCUG00000000354	RPP40	88	68.438	ENSODEG00000006170	-	99	68.438	Octodon_degus
ENSOCUG00000000354	RPP40	99	40.111	ENSONIG00000014016	rpp40	99	40.111	Oreochromis_niloticus
ENSOCUG00000000354	RPP40	83	67.219	ENSOANG00000001200	RPP40	99	67.219	Ornithorhynchus_anatinus
ENSOCUG00000000354	RPP40	99	37.430	ENSORLG00000008242	-	99	37.430	Oryzias_latipes
ENSOCUG00000000354	RPP40	99	37.151	ENSORLG00020013745	-	90	37.151	Oryzias_latipes_hni
ENSOCUG00000000354	RPP40	99	37.709	ENSORLG00015000887	-	99	37.709	Oryzias_latipes_hsok
ENSOCUG00000000354	RPP40	99	38.268	ENSOMEG00000002747	rpp40	99	38.268	Oryzias_melastigma
ENSOCUG00000000354	RPP40	99	78.116	ENSOGAG00000006055	RPP40	99	78.116	Otolemur_garnettii
ENSOCUG00000000354	RPP40	91	72.508	ENSOARG00000018783	RPP40	99	74.333	Ovis_aries
ENSOCUG00000000354	RPP40	99	75.900	ENSPPAG00000023703	RPP40	99	75.900	Pan_paniscus
ENSOCUG00000000354	RPP40	99	76.454	ENSPPRG00000005612	RPP40	99	76.454	Panthera_pardus
ENSOCUG00000000354	RPP40	99	71.625	ENSPTIG00000018847	RPP40	99	71.625	Panthera_tigris_altaica
ENSOCUG00000000354	RPP40	99	75.900	ENSPTRG00000017690	RPP40	99	75.900	Pan_troglodytes
ENSOCUG00000000354	RPP40	99	75.900	ENSPANG00000017865	RPP40	99	75.900	Papio_anubis
ENSOCUG00000000354	RPP40	98	50.140	ENSPKIG00000006311	rpp40	99	50.140	Paramormyrops_kingsleyae
ENSOCUG00000000354	RPP40	61	59.545	ENSPSIG00000007854	RPP40	99	59.545	Pelodiscus_sinensis
ENSOCUG00000000354	RPP40	92	65.868	ENSPEMG00000020809	Rpp40	90	65.868	Peromyscus_maniculatus_bairdii
ENSOCUG00000000354	RPP40	75	44.322	ENSPMAG00000008412	rpp40	99	44.322	Petromyzon_marinus
ENSOCUG00000000354	RPP40	99	71.468	ENSPCIG00000010682	RPP40	99	71.468	Phascolarctos_cinereus
ENSOCUG00000000354	RPP40	98	37.815	ENSPFOG00000011460	rpp40	98	37.815	Poecilia_formosa
ENSOCUG00000000354	RPP40	98	37.465	ENSPLAG00000001334	rpp40	98	37.465	Poecilia_latipinna
ENSOCUG00000000354	RPP40	98	38.028	ENSPMEG00000007721	rpp40	98	38.028	Poecilia_mexicana
ENSOCUG00000000354	RPP40	98	38.873	ENSPREG00000009215	rpp40	98	38.873	Poecilia_reticulata
ENSOCUG00000000354	RPP40	99	76.177	ENSPPYG00000016194	RPP40	99	76.177	Pongo_abelii
ENSOCUG00000000354	RPP40	51	77.717	ENSPCAG00000002700	-	99	77.717	Procavia_capensis
ENSOCUG00000000354	RPP40	99	76.731	ENSPCOG00000003907	RPP40	99	76.731	Propithecus_coquereli
ENSOCUG00000000354	RPP40	99	77.008	ENSPVAG00000011325	RPP40	99	77.008	Pteropus_vampyrus
ENSOCUG00000000354	RPP40	82	39.189	ENSPNYG00000004432	rpp40	98	39.189	Pundamilia_nyererei
ENSOCUG00000000354	RPP40	98	44.382	ENSPNAG00000019125	rpp40	98	44.382	Pygocentrus_nattereri
ENSOCUG00000000354	RPP40	99	75.346	ENSRNOG00000016226	Rpp40	99	77.667	Rattus_norvegicus
ENSOCUG00000000354	RPP40	99	76.177	ENSRBIG00000035800	RPP40	99	78.333	Rhinopithecus_bieti
ENSOCUG00000000354	RPP40	99	76.177	ENSRROG00000039116	RPP40	99	76.177	Rhinopithecus_roxellana
ENSOCUG00000000354	RPP40	99	74.515	ENSSBOG00000020297	RPP40	99	74.515	Saimiri_boliviensis_boliviensis
ENSOCUG00000000354	RPP40	76	71.377	ENSSHAG00000002102	RPP40	99	71.377	Sarcophilus_harrisii
ENSOCUG00000000354	RPP40	99	47.091	ENSSFOG00015001142	rpp40	81	47.091	Scleropages_formosus
ENSOCUG00000000354	RPP40	98	40.169	ENSSDUG00000007202	rpp40	98	40.169	Seriola_dumerili
ENSOCUG00000000354	RPP40	98	40.449	ENSSLDG00000017563	rpp40	98	40.449	Seriola_lalandi_dorsalis
ENSOCUG00000000354	RPP40	81	61.092	ENSSPUG00000018950	-	99	61.092	Sphenodon_punctatus
ENSOCUG00000000354	RPP40	99	62.011	ENSSPUG00000017487	-	98	62.011	Sphenodon_punctatus
ENSOCUG00000000354	RPP40	98	41.127	ENSSPAG00000022716	rpp40	98	41.127	Stegastes_partitus
ENSOCUG00000000354	RPP40	99	70.914	ENSSSCG00000000998	RPP40	99	71.906	Sus_scrofa
ENSOCUG00000000354	RPP40	98	61.517	ENSTGUG00000002258	-	99	61.517	Taeniopygia_guttata
ENSOCUG00000000354	RPP40	97	39.886	ENSTRUG00000003755	rpp40	97	39.886	Takifugu_rubripes
ENSOCUG00000000354	RPP40	99	38.827	ENSTNIG00000003077	rpp40	99	38.827	Tetraodon_nigroviridis
ENSOCUG00000000354	RPP40	68	52.823	ENSTBEG00000014467	-	73	52.823	Tupaia_belangeri
ENSOCUG00000000354	RPP40	99	67.222	ENSTTRG00000007319	RPP40	99	67.222	Tursiops_truncatus
ENSOCUG00000000354	RPP40	99	76.731	ENSUAMG00000002159	RPP40	99	78.667	Ursus_americanus
ENSOCUG00000000354	RPP40	99	76.731	ENSUMAG00000018639	RPP40	93	76.731	Ursus_maritimus
ENSOCUG00000000354	RPP40	75	57.721	ENSVPAG00000004652	-	94	57.721	Vicugna_pacos
ENSOCUG00000000354	RPP40	99	76.177	ENSVVUG00000005451	RPP40	99	76.177	Vulpes_vulpes
ENSOCUG00000000354	RPP40	99	49.307	ENSXETG00000017617	rpp40	99	49.307	Xenopus_tropicalis
ENSOCUG00000000354	RPP40	53	44.444	ENSXCOG00000019991	-	88	30.508	Xiphophorus_couchianus