EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000000442 (Gene tree)
Gene ID: 100345815
Gene Symbol: -
Alias: -
Full Name: ERCC excision repair 6 like 2
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 120459 bases
Position: chr1:74835768-74956226
Accession: 100345815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000000387	ResIII	PF04851.15	4.6e-12	1	1
ENSOCUP00000000394	ResIII	PF04851.15	2.1e-11	1	1
ENSOCUP00000000387	DEAD	PF00270.29	7.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000000449	-	5262	XM_008257721	ENSOCUP00000000394	1530 (aa)	XP_008255943	G1SDB6
ENSOCUT00000000442	-	2103	-	ENSOCUP00000000387	700 (aa)	-	G1SDB1

Gene Model

Click here to download ENSOCUG00000000442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000000442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000000442	-	83	31.703	ENSOCUG00000009336	CHD1L	54	31.703
ENSOCUG00000000442	-	78	30.088	ENSOCUG00000005229	RAD54L	68	30.919
ENSOCUG00000000442	-	83	31.650	ENSOCUG00000016478	-	59	31.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000000442	-	98	92.868	ENSG00000182150	ERCC6L2	100	98.780	Homo_sapiens
ENSOCUG00000000442	-	86	90.333	ENSAMEG00000011657	ERCC6L2	98	89.439	Ailuropoda_melanoleuca
ENSOCUG00000000442	-	98	77.080	ENSAPLG00000006105	ERCC6L2	98	77.080	Anas_platyrhynchos
ENSOCUG00000000442	-	98	77.001	ENSACAG00000012947	ERCC6L2	100	77.001	Anolis_carolinensis
ENSOCUG00000000442	-	95	62.739	ENSACLG00000015088	ercc6l2	90	56.235	Astatotilapia_calliptera
ENSOCUG00000000442	-	100	90.313	ENSCJAG00000008862	ERCC6L2	98	90.870	Callithrix_jacchus
ENSOCUG00000000442	-	99	89.158	ENSCAFG00000001219	ERCC6L2	99	81.067	Canis_familiaris
ENSOCUG00000000442	-	100	89.744	ENSTSYG00000013871	ERCC6L2	99	89.744	Carlito_syrichta
ENSOCUG00000000442	-	61	82.201	ENSCAPG00000009212	ERCC6L2	100	82.201	Cavia_aperea
ENSOCUG00000000442	-	98	89.504	ENSCPOG00000004544	-	91	89.744	Cavia_porcellus
ENSOCUG00000000442	-	98	91.849	ENSCCAG00000026980	ERCC6L2	98	90.728	Cebus_capucinus
ENSOCUG00000000442	-	98	78.311	ENSCHOG00000006282	ERCC6L2	98	77.461	Choloepus_hoffmanni
ENSOCUG00000000442	-	98	80.029	ENSCPBG00000005414	ERCC6L2	99	57.901	Chrysemys_picta_bellii
ENSOCUG00000000442	-	99	91.273	ENSCANG00000039934	ERCC6L2	98	91.155	Colobus_angolensis_palliatus
ENSOCUG00000000442	-	100	88.445	ENSCGRG00001022738	Ercc6l2	99	88.588	Cricetulus_griseus_chok1gshd
ENSOCUG00000000442	-	79	91.470	ENSCGRG00000015854	Ercc6l2	99	77.305	Cricetulus_griseus_crigri
ENSOCUG00000000442	-	88	66.559	ENSDARG00000012403	ercc6l2	79	59.787	Danio_rerio
ENSOCUG00000000442	-	61	90.888	ENSDORG00000010788	Ercc6l2	93	90.888	Dipodomys_ordii
ENSOCUG00000000442	-	99	84.308	ENSETEG00000010686	ERCC6L2	97	85.486	Echinops_telfairi
ENSOCUG00000000442	-	98	71.616	ENSEEUG00000009341	ERCC6L2	98	70.899	Erinaceus_europaeus
ENSOCUG00000000442	-	98	62.518	ENSELUG00000002272	ercc6l2	62	57.332	Esox_lucius
ENSOCUG00000000442	-	98	77.391	ENSFALG00000003400	ERCC6L2	90	70.617	Ficedula_albicollis
ENSOCUG00000000442	-	98	90.365	ENSFDAG00000000805	ERCC6L2	98	89.971	Fukomys_damarensis
ENSOCUG00000000442	-	99	62.751	ENSFHEG00000017890	ercc6l2	68	56.471	Fundulus_heteroclitus
ENSOCUG00000000442	-	92	64.752	ENSGMOG00000007751	ercc6l2	86	60.243	Gadus_morhua
ENSOCUG00000000442	-	99	76.556	ENSGALG00000012621	ERCC6L2	98	52.662	Gallus_gallus
ENSOCUG00000000442	-	98	63.584	ENSGAFG00000012386	ercc6l2	89	56.422	Gambusia_affinis
ENSOCUG00000000442	-	87	68.344	ENSGACG00000006992	ercc6l2	84	60.543	Gasterosteus_aculeatus
ENSOCUG00000000442	-	98	80.463	ENSGAGG00000021675	ERCC6L2	99	57.243	Gopherus_agassizii
ENSOCUG00000000442	-	98	92.576	ENSGGOG00000002705	ERCC6L2	98	91.583	Gorilla_gorilla
ENSOCUG00000000442	-	80	95.480	ENSHGLG00000009488	ERCC6L2	95	93.923	Heterocephalus_glaber_female
ENSOCUG00000000442	-	88	66.238	ENSIPUG00000000283	ercc6l2	80	66.457	Ictalurus_punctatus
ENSOCUG00000000442	-	100	88.319	ENSJJAG00000018150	Ercc6l2	100	88.319	Jaculus_jaculus
ENSOCUG00000000442	-	98	73.469	ENSLACG00000011767	ERCC6L2	99	50.983	Latimeria_chalumnae
ENSOCUG00000000442	-	99	68.156	ENSLOCG00000009238	ercc6l2	98	47.601	Lepisosteus_oculatus
ENSOCUG00000000442	-	99	87.931	ENSLAFG00000013092	ERCC6L2	99	87.931	Loxodonta_africana
ENSOCUG00000000442	-	99	91.273	ENSMNEG00000035630	ERCC6L2	98	91.273	Macaca_nemestrina
ENSOCUG00000000442	-	99	91.416	ENSMLEG00000019530	ERCC6L2	98	91.416	Mandrillus_leucophaeus
ENSOCUG00000000442	-	98	90.087	ENSMAUG00000004820	-	100	77.358	Mesocricetus_auratus
ENSOCUG00000000442	-	98	93.886	ENSMICG00000029160	ERCC6L2	98	92.867	Microcebus_murinus
ENSOCUG00000000442	-	98	88.759	ENSMOCG00000019362	-	92	89.977	Microtus_ochrogaster
ENSOCUG00000000442	-	98	60.888	ENSMMOG00000001419	ercc6l2	59	60.888	Mola_mola
ENSOCUG00000000442	-	98	64.103	ENSMALG00000016933	ercc6l2	80	62.703	Monopterus_albus
ENSOCUG00000000442	-	100	88.302	MGP_CAROLIEiJ_G0018635	-	100	89.650	Mus_caroli
ENSOCUG00000000442	-	100	88.160	ENSMUSG00000021470	Ercc6l2	100	88.160	Mus_musculus
ENSOCUG00000000442	-	100	88.873	MGP_PahariEiJ_G0019699	-	100	90.233	Mus_pahari
ENSOCUG00000000442	-	100	88.445	MGP_SPRETEiJ_G0019515	-	100	89.796	Mus_spretus
ENSOCUG00000000442	-	92	88.509	ENSMPUG00000006738	ERCC6L2	97	82.104	Mustela_putorius_furo
ENSOCUG00000000442	-	99	87.554	ENSMLUG00000000845	ERCC6L2	98	87.037	Myotis_lucifugus
ENSOCUG00000000442	-	98	89.665	ENSNGAG00000016174	Ercc6l2	98	89.665	Nannospalax_galili
ENSOCUG00000000442	-	98	92.431	ENSNLEG00000016784	ERCC6L2	98	91.298	Nomascus_leucogenys
ENSOCUG00000000442	-	89	92.444	ENSOPRG00000011647	ERCC6L2	100	92.444	Ochotona_princeps
ENSOCUG00000000442	-	98	90.102	ENSODEG00000016588	ERCC6L2	98	90.909	Octodon_degus
ENSOCUG00000000442	-	98	61.871	ENSONIG00000015139	ercc6l2	98	62.267	Oreochromis_niloticus
ENSOCUG00000000442	-	87	68.618	ENSORLG00000004287	ercc6l2	91	61.784	Oryzias_latipes
ENSOCUG00000000442	-	87	68.293	ENSORLG00020002133	ercc6l2	91	61.600	Oryzias_latipes_hni
ENSOCUG00000000442	-	87	68.455	ENSORLG00015010250	ercc6l2	83	60.618	Oryzias_latipes_hsok
ENSOCUG00000000442	-	91	65.674	ENSOMEG00000021983	ercc6l2	93	59.642	Oryzias_melastigma
ENSOCUG00000000442	-	87	93.464	ENSOGAG00000003146	ERCC6L2	97	88.066	Otolemur_garnettii
ENSOCUG00000000442	-	98	91.412	ENSOARG00000008546	ERCC6L2	100	80.642	Ovis_aries
ENSOCUG00000000442	-	98	93.013	ENSPPAG00000035061	ERCC6L2	98	92.011	Pan_paniscus
ENSOCUG00000000442	-	98	90.539	ENSPPRG00000019238	ERCC6L2	98	89.444	Panthera_pardus
ENSOCUG00000000442	-	98	90.539	ENSPTIG00000009148	ERCC6L2	98	89.301	Panthera_tigris_altaica
ENSOCUG00000000442	-	98	93.013	ENSPTRG00000048689	ERCC6L2	98	92.011	Pan_troglodytes
ENSOCUG00000000442	-	87	66.829	ENSPKIG00000016799	ercc6l2	85	60.969	Paramormyrops_kingsleyae
ENSOCUG00000000442	-	98	80.495	ENSPSIG00000010627	ERCC6L2	100	80.495	Pelodiscus_sinensis
ENSOCUG00000000442	-	72	67.465	ENSPMGG00000016547	ercc6l2	87	56.522	Periophthalmus_magnuspinnatus
ENSOCUG00000000442	-	98	89.489	ENSPEMG00000006631	-	99	76.959	Peromyscus_maniculatus_bairdii
ENSOCUG00000000442	-	98	83.504	ENSPCIG00000020095	-	96	69.105	Phascolarctos_cinereus
ENSOCUG00000000442	-	98	92.420	ENSPPYG00000019412	-	99	70.884	Pongo_abelii
ENSOCUG00000000442	-	98	89.083	ENSPCOG00000026714	ERCC6L2	98	88.160	Propithecus_coquereli
ENSOCUG00000000442	-	90	91.026	ENSPVAG00000003926	ERCC6L2	90	91.009	Pteropus_vampyrus
ENSOCUG00000000442	-	95	62.777	ENSPNYG00000015347	ercc6l2	89	55.706	Pundamilia_nyererei
ENSOCUG00000000442	-	88	66.882	ENSPNAG00000011413	ercc6l2	89	59.948	Pygocentrus_nattereri
ENSOCUG00000000442	-	99	88.600	ENSRNOG00000019175	Ercc6l2	99	68.673	Rattus_norvegicus
ENSOCUG00000000442	-	99	87.411	ENSRBIG00000018434	ERCC6L2	98	87.447	Rhinopithecus_bieti
ENSOCUG00000000442	-	99	90.987	ENSRROG00000029000	ERCC6L2	98	91.013	Rhinopithecus_roxellana
ENSOCUG00000000442	-	55	80.362	ENSSHAG00000000781	-	100	81.137	Sarcophilus_harrisii
ENSOCUG00000000442	-	87	66.721	ENSSFOG00015006394	ercc6l2	70	60.805	Scleropages_formosus
ENSOCUG00000000442	-	98	63.597	ENSSLDG00000018663	ercc6l2	76	61.957	Seriola_lalandi_dorsalis
ENSOCUG00000000442	-	98	76.642	ENSSPUG00000004336	ERCC6L2	98	57.484	Sphenodon_punctatus
ENSOCUG00000000442	-	98	61.461	ENSSPAG00000004484	ercc6l2	82	54.971	Stegastes_partitus
ENSOCUG00000000442	-	98	77.114	ENSTGUG00000000524	ERCC6L2	100	77.114	Taeniopygia_guttata
ENSOCUG00000000442	-	98	61.538	ENSTRUG00000014634	ercc6l2	79	63.830	Takifugu_rubripes
ENSOCUG00000000442	-	62	94.231	ENSTBEG00000014213	ERCC6L2	87	94.231	Tupaia_belangeri
ENSOCUG00000000442	-	99	85.201	ENSTTRG00000005372	ERCC6L2	98	84.451	Tursiops_truncatus
ENSOCUG00000000442	-	90	91.627	ENSVPAG00000004701	ERCC6L2	99	91.627	Vicugna_pacos
ENSOCUG00000000442	-	97	71.659	ENSXETG00000014835	ercc6l2	99	64.294	Xenopus_tropicalis
ENSOCUG00000000442	-	98	63.439	ENSXMAG00000023695	ercc6l2	88	56.813	Xiphophorus_maculatus