EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000000516 (Gene tree)
Gene ID: 100353803
Gene Symbol: -
Alias: -
Full Name: nucleolar and coiled-body phosphoprotein 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 8819 bases
Position: chr18:50181155-50189973
Accession: 100353803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000000452	SRP40_C	PF05022.12	1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000000518	-	2094	XM_008270398	ENSOCUP00000000452	697 (aa)	XP_008268620	G1SDG8

Gene Model

Click here to download ENSOCUG00000000516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000000516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000000516	-	100	79.408	ENSG00000166197	NOLC1	96	97.500	Homo_sapiens
ENSOCUG00000000516	-	100	78.552	ENSAMEG00000017687	NOLC1	100	79.248	Ailuropoda_melanoleuca
ENSOCUG00000000516	-	100	74.435	ENSANAG00000026475	-	57	78.195	Aotus_nancymaae
ENSOCUG00000000516	-	100	74.930	ENSBTAG00000007435	NOLC1	100	75.634	Bos_taurus
ENSOCUG00000000516	-	100	76.430	ENSCJAG00000017832	NOLC1	100	78.382	Callithrix_jacchus
ENSOCUG00000000516	-	100	78.121	ENSCAFG00000010062	NOLC1	100	77.419	Canis_familiaris
ENSOCUG00000000516	-	100	77.247	ENSCAFG00020010146	NOLC1	100	76.685	Canis_lupus_dingo
ENSOCUG00000000516	-	94	72.969	ENSTSYG00000011322	NOLC1	87	75.124	Carlito_syrichta
ENSOCUG00000000516	-	66	72.099	ENSCAPG00000008758	-	83	73.476	Cavia_aperea
ENSOCUG00000000516	-	99	69.633	ENSCPOG00000004504	NOLC1	53	71.538	Cavia_porcellus
ENSOCUG00000000516	-	100	74.543	ENSCCAG00000031293	NOLC1	100	79.635	Cebus_capucinus
ENSOCUG00000000516	-	100	80.758	ENSCATG00000020949	NOLC1	100	80.618	Cercocebus_atys
ENSOCUG00000000516	-	100	77.486	ENSCSAG00000005465	NOLC1	100	78.177	Chlorocebus_sabaeus
ENSOCUG00000000516	-	100	77.393	ENSCANG00000032550	NOLC1	100	77.393	Colobus_angolensis_palliatus
ENSOCUG00000000516	-	100	70.000	ENSCGRG00001009806	Nolc1	100	69.577	Cricetulus_griseus_chok1gshd
ENSOCUG00000000516	-	100	70.000	ENSCGRG00000005530	Nolc1	100	69.577	Cricetulus_griseus_crigri
ENSOCUG00000000516	-	100	93.496	ENSDNOG00000025256	NOLC1	81	93.443	Dasypus_novemcinctus
ENSOCUG00000000516	-	100	76.446	ENSDORG00000001056	Nolc1	100	75.599	Dipodomys_ordii
ENSOCUG00000000516	-	100	79.944	ENSEASG00005007519	NOLC1	61	80.750	Equus_asinus_asinus
ENSOCUG00000000516	-	100	80.111	ENSECAG00000024700	NOLC1	56	82.500	Equus_caballus
ENSOCUG00000000516	-	83	78.151	ENSEEUG00000003212	NOLC1	87	80.800	Erinaceus_europaeus
ENSOCUG00000000516	-	100	76.323	ENSFCAG00000001239	NOLC1	100	78.273	Felis_catus
ENSOCUG00000000516	-	100	69.832	ENSFDAG00000006050	NOLC1	55	73.604	Fukomys_damarensis
ENSOCUG00000000516	-	100	78.940	ENSGGOG00000002158	NOLC1	100	78.661	Gorilla_gorilla
ENSOCUG00000000516	-	100	71.806	ENSHGLG00000003156	NOLC1	56	74.436	Heterocephalus_glaber_female
ENSOCUG00000000516	-	100	71.905	ENSHGLG00100008172	NOLC1	56	74.436	Heterocephalus_glaber_male
ENSOCUG00000000516	-	100	78.462	ENSSTOG00000002168	NOLC1	100	78.182	Ictidomys_tridecemlineatus
ENSOCUG00000000516	-	100	69.930	ENSJJAG00000021131	Nolc1	93	77.255	Jaculus_jaculus
ENSOCUG00000000516	-	100	80.654	ENSLAFG00000014245	NOLC1	100	80.228	Loxodonta_africana
ENSOCUG00000000516	-	100	80.450	ENSMFAG00000044654	NOLC1	100	80.309	Macaca_fascicularis
ENSOCUG00000000516	-	100	80.872	ENSMMUG00000001183	NOLC1	100	80.591	Macaca_mulatta
ENSOCUG00000000516	-	100	80.084	ENSMLEG00000040773	NOLC1	100	79.944	Mandrillus_leucophaeus
ENSOCUG00000000516	-	100	80.609	ENSMICG00000011811	NOLC1	100	80.860	Microcebus_murinus
ENSOCUG00000000516	-	100	72.946	ENSMOCG00000015232	Nolc1	100	76.062	Microtus_ochrogaster
ENSOCUG00000000516	-	64	69.032	MGP_CAROLIEiJ_G0023027	Nolc1	100	71.448	Mus_caroli
ENSOCUG00000000516	-	100	73.147	MGP_PahariEiJ_G0014517	Nolc1	100	73.109	Mus_pahari
ENSOCUG00000000516	-	100	78.442	ENSMPUG00000016887	NOLC1	100	77.886	Mustela_putorius_furo
ENSOCUG00000000516	-	100	79.666	ENSMLUG00000001726	NOLC1	100	78.830	Myotis_lucifugus
ENSOCUG00000000516	-	100	75.524	ENSNGAG00000024139	Nolc1	100	76.643	Nannospalax_galili
ENSOCUG00000000516	-	100	77.947	ENSNLEG00000015012	NOLC1	100	78.552	Nomascus_leucogenys
ENSOCUG00000000516	-	91	81.975	ENSOPRG00000009381	NOLC1	91	83.042	Ochotona_princeps
ENSOCUG00000000516	-	100	69.701	ENSODEG00000006304	NOLC1	100	69.275	Octodon_degus
ENSOCUG00000000516	-	100	77.131	ENSOGAG00000016359	NOLC1	100	77.021	Otolemur_garnettii
ENSOCUG00000000516	-	100	73.212	ENSOARG00000017556	NOLC1	56	80.653	Ovis_aries
ENSOCUG00000000516	-	100	79.325	ENSPPAG00000038082	NOLC1	100	77.215	Pan_paniscus
ENSOCUG00000000516	-	100	75.556	ENSPPRG00000003072	NOLC1	100	77.361	Panthera_pardus
ENSOCUG00000000516	-	100	75.482	ENSPTIG00000014862	NOLC1	100	77.273	Panthera_tigris_altaica
ENSOCUG00000000516	-	100	79.747	ENSPTRG00000023882	NOLC1	100	79.466	Pan_troglodytes
ENSOCUG00000000516	-	100	80.478	ENSPANG00000021014	NOLC1	100	78.652	Papio_anubis
ENSOCUG00000000516	-	100	80.704	ENSPPYG00000002595	NOLC1	100	79.577	Pongo_abelii
ENSOCUG00000000516	-	80	100.000	ENSPCAG00000008388	NOLC1	85	100.000	Procavia_capensis
ENSOCUG00000000516	-	100	78.911	ENSPCOG00000019070	-	100	80.731	Propithecus_coquereli
ENSOCUG00000000516	-	100	76.006	ENSPVAG00000004050	NOLC1	100	76.699	Pteropus_vampyrus
ENSOCUG00000000516	-	66	72.176	ENSRNOG00000018704	Nolc1	100	74.685	Rattus_norvegicus
ENSOCUG00000000516	-	100	74.631	ENSRBIG00000032216	NOLC1	100	76.107	Rhinopithecus_bieti
ENSOCUG00000000516	-	100	79.296	ENSRROG00000038056	NOLC1	100	80.423	Rhinopithecus_roxellana
ENSOCUG00000000516	-	100	78.962	ENSSBOG00000031205	NOLC1	100	79.243	Saimiri_boliviensis_boliviensis
ENSOCUG00000000516	-	100	72.981	ENSSARG00000004111	NOLC1	100	77.159	Sorex_araneus
ENSOCUG00000000516	-	100	76.966	ENSSSCG00000010576	NOLC1	100	78.933	Sus_scrofa
ENSOCUG00000000516	-	100	79.469	ENSUAMG00000028059	NOLC1	100	79.190	Ursus_americanus
ENSOCUG00000000516	-	100	79.383	ENSUMAG00000023063	NOLC1	100	79.102	Ursus_maritimus
ENSOCUG00000000516	-	89	71.053	ENSVPAG00000005767	NOLC1	87	70.943	Vicugna_pacos
ENSOCUG00000000516	-	100	77.415	ENSVVUG00000002661	NOLC1	100	76.096	Vulpes_vulpes