EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000000552 (Gene tree)
Gene ID: 100356502
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 44030 bases
Position: chrGL018767:253225-297254
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000000477	HnRNP_M	PF11532.8	2.9e-19	1	1
ENSOCUP00000000477	RRM_1	PF00076.22	6.2e-53	1	3
ENSOCUP00000000477	RRM_1	PF00076.22	6.2e-53	2	3
ENSOCUP00000000477	RRM_1	PF00076.22	6.2e-53	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000000552	-	2103	-	ENSOCUP00000000477	700 (aa)	-	G1SDJ0

Gene Model

Click here to download ENSOCUG00000000552's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000000552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000000552	-	99	91.559	ENSOCUG00000024611	-	99	91.559
ENSOCUG00000000552	-	79	83.636	ENSOCUG00000023204	-	99	79.636
ENSOCUG00000000552	-	77	52.703	ENSOCUG00000013043	MYEF2	95	41.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000000552	-	98	98.263	ENSG00000099783	HNRNPM	100	98.263	Homo_sapiens
ENSOCUG00000000552	-	89	68.000	ENSAPOG00000001463	hnrnpm	84	66.667	Acanthochromis_polyacanthus
ENSOCUG00000000552	-	98	92.466	ENSAMEG00000004979	HNRNPM	100	92.466	Ailuropoda_melanoleuca
ENSOCUG00000000552	-	92	67.826	ENSACIG00000011870	hnrnpm	88	66.667	Amphilophus_citrinellus
ENSOCUG00000000552	-	93	66.667	ENSAOCG00000008519	hnrnpm	91	66.667	Amphiprion_ocellaris
ENSOCUG00000000552	-	97	59.477	ENSAPEG00000004257	hnrnpm	88	67.460	Amphiprion_percula
ENSOCUG00000000552	-	92	66.379	ENSATEG00000008976	hnrnpm	88	66.379	Anabas_testudineus
ENSOCUG00000000552	-	93	68.451	ENSAPLG00000010149	HNRNPM	100	67.324	Anas_platyrhynchos
ENSOCUG00000000552	-	100	85.325	ENSANAG00000019489	-	99	84.016	Aotus_nancymaae
ENSOCUG00000000552	-	98	97.974	ENSANAG00000025358	HNRNPM	100	97.974	Aotus_nancymaae
ENSOCUG00000000552	-	92	67.241	ENSACLG00000020495	hnrnpm	90	67.241	Astatotilapia_calliptera
ENSOCUG00000000552	-	92	67.769	ENSAMXG00000016073	hnrnpm	87	67.769	Astyanax_mexicanus
ENSOCUG00000000552	-	98	97.829	ENSBTAG00000021039	HNRNPM	100	97.829	Bos_taurus
ENSOCUG00000000552	-	58	63.684	ENSBTAG00000048355	-	100	54.321	Bos_taurus
ENSOCUG00000000552	-	100	97.017	ENSCJAG00000010802	HNRNPM	100	95.224	Callithrix_jacchus
ENSOCUG00000000552	-	100	97.585	ENSCAFG00000018524	HNRNPM	95	97.585	Canis_familiaris
ENSOCUG00000000552	-	100	88.038	ENSCAFG00020022128	HNRNPM	100	90.563	Canis_lupus_dingo
ENSOCUG00000000552	-	98	97.829	ENSCHIG00000026313	HNRNPM	100	97.829	Capra_hircus
ENSOCUG00000000552	-	93	98.775	ENSTSYG00000011487	-	95	98.775	Carlito_syrichta
ENSOCUG00000000552	-	99	85.735	ENSTSYG00000037074	-	99	84.279	Carlito_syrichta
ENSOCUG00000000552	-	94	65.825	ENSTSYG00000030502	-	99	70.315	Carlito_syrichta
ENSOCUG00000000552	-	88	86.207	ENSCAPG00000011505	HNRNPM	97	84.029	Cavia_aperea
ENSOCUG00000000552	-	98	97.685	ENSCPOG00000015182	HNRNPM	100	97.685	Cavia_porcellus
ENSOCUG00000000552	-	98	91.929	ENSCCAG00000018782	HNRNPM	100	93.310	Cebus_capucinus
ENSOCUG00000000552	-	88	86.420	ENSCCAG00000018580	-	100	84.480	Cebus_capucinus
ENSOCUG00000000552	-	98	98.263	ENSCATG00000035478	HNRNPM	100	98.263	Cercocebus_atys
ENSOCUG00000000552	-	98	97.974	ENSCLAG00000011194	-	100	97.974	Chinchilla_lanigera
ENSOCUG00000000552	-	98	72.532	ENSCLAG00000003049	-	98	71.137	Chinchilla_lanigera
ENSOCUG00000000552	-	96	92.647	ENSCSAG00000008009	HNRNPM	98	91.029	Chlorocebus_sabaeus
ENSOCUG00000000552	-	98	92.466	ENSCHOG00000013627	HNRNPM	100	92.466	Choloepus_hoffmanni
ENSOCUG00000000552	-	88	71.770	ENSCPBG00000017052	-	100	69.378	Chrysemys_picta_bellii
ENSOCUG00000000552	-	93	96.195	ENSCANG00000043491	HNRNPM	100	96.195	Colobus_angolensis_palliatus
ENSOCUG00000000552	-	70	88.485	ENSCANG00000041671	-	99	75.632	Colobus_angolensis_palliatus
ENSOCUG00000000552	-	96	88.643	ENSCGRG00001022655	-	98	87.021	Cricetulus_griseus_chok1gshd
ENSOCUG00000000552	-	98	72.663	ENSCGRG00001008003	-	98	71.573	Cricetulus_griseus_chok1gshd
ENSOCUG00000000552	-	98	64.783	ENSCGRG00001004249	-	97	62.574	Cricetulus_griseus_chok1gshd
ENSOCUG00000000552	-	94	89.464	ENSCGRG00001012021	-	94	89.464	Cricetulus_griseus_chok1gshd
ENSOCUG00000000552	-	96	73.560	ENSCGRG00001004486	-	97	72.549	Cricetulus_griseus_chok1gshd
ENSOCUG00000000552	-	96	89.604	ENSCGRG00000010065	-	91	87.789	Cricetulus_griseus_crigri
ENSOCUG00000000552	-	98	95.948	ENSCGRG00000012441	-	100	95.948	Cricetulus_griseus_crigri
ENSOCUG00000000552	-	98	72.663	ENSCGRG00000012006	-	98	71.573	Cricetulus_griseus_crigri
ENSOCUG00000000552	-	96	73.560	ENSCGRG00000003596	-	97	72.549	Cricetulus_griseus_crigri
ENSOCUG00000000552	-	92	68.103	ENSCSEG00000014980	hnrnpm	84	68.103	Cynoglossus_semilaevis
ENSOCUG00000000552	-	91	67.257	ENSCVAG00000020838	hnrnpm	86	64.957	Cyprinodon_variegatus
ENSOCUG00000000552	-	92	70.796	ENSDARG00000061735	hnrnpm	82	67.797	Danio_rerio
ENSOCUG00000000552	-	100	97.585	ENSDNOG00000012157	HNRNPM	93	97.585	Dasypus_novemcinctus
ENSOCUG00000000552	-	98	98.263	ENSDORG00000008105	Hnrnpm	100	98.263	Dipodomys_ordii
ENSOCUG00000000552	-	98	89.041	ENSETEG00000019712	HNRNPM	100	89.041	Echinops_telfairi
ENSOCUG00000000552	-	100	98.011	ENSEASG00005022434	HNRNPM	93	98.011	Equus_asinus_asinus
ENSOCUG00000000552	-	100	98.011	ENSECAG00000023868	HNRNPM	93	98.011	Equus_caballus
ENSOCUG00000000552	-	59	77.778	ENSEEUG00000001929	-	70	77.778	Erinaceus_europaeus
ENSOCUG00000000552	-	96	60.690	ENSELUG00000021183	hnrnpm	86	68.696	Esox_lucius
ENSOCUG00000000552	-	98	89.740	ENSFCAG00000015218	HNRNPM	98	87.187	Felis_catus
ENSOCUG00000000552	-	88	74.617	ENSFALG00000001059	HNRNPM	100	73.083	Ficedula_albicollis
ENSOCUG00000000552	-	98	97.391	ENSFDAG00000014680	HNRNPM	100	97.391	Fukomys_damarensis
ENSOCUG00000000552	-	93	65.873	ENSFHEG00000006712	hnrnpm	84	65.873	Fundulus_heteroclitus
ENSOCUG00000000552	-	91	47.839	ENSGMOG00000009724	hnrnpm	98	47.210	Gadus_morhua
ENSOCUG00000000552	-	93	68.347	ENSGALG00000000377	HNRNPM	98	66.576	Gallus_gallus
ENSOCUG00000000552	-	93	65.079	ENSGAFG00000013798	hnrnpm	89	63.846	Gambusia_affinis
ENSOCUG00000000552	-	92	52.865	ENSGACG00000010265	hnrnpm	100	52.774	Gasterosteus_aculeatus
ENSOCUG00000000552	-	88	71.611	ENSGAGG00000019124	-	100	68.900	Gopherus_agassizii
ENSOCUG00000000552	-	98	98.263	ENSGGOG00000003498	HNRNPM	100	98.263	Gorilla_gorilla
ENSOCUG00000000552	-	92	67.241	ENSHBUG00000023451	hnrnpm	89	67.241	Haplochromis_burtoni
ENSOCUG00000000552	-	98	94.501	ENSHGLG00000009796	-	100	94.501	Heterocephalus_glaber_female
ENSOCUG00000000552	-	98	96.093	ENSHGLG00100006675	-	100	96.237	Heterocephalus_glaber_male
ENSOCUG00000000552	-	92	50.071	ENSHCOG00000019984	hnrnpm	99	49.648	Hippocampus_comes
ENSOCUG00000000552	-	96	50.270	ENSIPUG00000025097	hnrnpm	98	51.253	Ictalurus_punctatus
ENSOCUG00000000552	-	98	98.698	ENSSTOG00000008112	HNRNPM	100	98.698	Ictidomys_tridecemlineatus
ENSOCUG00000000552	-	98	96.816	ENSJJAG00000017319	Hnrnpm	100	96.816	Jaculus_jaculus
ENSOCUG00000000552	-	93	62.595	ENSKMAG00000022136	hnrnpm	87	62.595	Kryptolebias_marmoratus
ENSOCUG00000000552	-	75	77.600	ENSLBEG00000004545	hnrnpm	86	68.966	Labrus_bergylta
ENSOCUG00000000552	-	92	47.573	ENSLACG00000016814	HNRNPM	100	47.450	Latimeria_chalumnae
ENSOCUG00000000552	-	92	53.638	ENSLOCG00000004456	hnrnpm	97	53.704	Lepisosteus_oculatus
ENSOCUG00000000552	-	96	89.819	ENSLAFG00000013603	HNRNPM	98	88.285	Loxodonta_africana
ENSOCUG00000000552	-	98	98.263	ENSMFAG00000037617	HNRNPM	100	98.263	Macaca_fascicularis
ENSOCUG00000000552	-	98	97.829	ENSMMUG00000018806	HNRNPM	100	97.829	Macaca_mulatta
ENSOCUG00000000552	-	98	97.829	ENSMNEG00000036546	HNRNPM	100	97.829	Macaca_nemestrina
ENSOCUG00000000552	-	98	98.263	ENSMLEG00000042113	HNRNPM	100	98.263	Mandrillus_leucophaeus
ENSOCUG00000000552	-	92	68.333	ENSMAMG00000005612	hnrnpm	85	68.333	Mastacembelus_armatus
ENSOCUG00000000552	-	62	69.828	ENSMZEG00005002512	hnrnpm	86	69.828	Maylandia_zebra
ENSOCUG00000000552	-	93	75.287	ENSMGAG00000000700	HNRNPM	100	73.276	Meleagris_gallopavo
ENSOCUG00000000552	-	98	97.395	ENSMAUG00000017476	Hnrnpm	100	97.395	Mesocricetus_auratus
ENSOCUG00000000552	-	100	94.318	ENSMICG00000002532	-	100	92.877	Microcebus_murinus
ENSOCUG00000000552	-	99	90.327	ENSMICG00000028503	-	99	89.016	Microcebus_murinus
ENSOCUG00000000552	-	98	97.250	ENSMOCG00000005769	Hnrnpm	100	97.250	Microtus_ochrogaster
ENSOCUG00000000552	-	92	46.818	ENSMMOG00000019610	hnrnpm	96	48.876	Mola_mola
ENSOCUG00000000552	-	98	82.834	ENSMODG00000003801	-	98	81.553	Monodelphis_domestica
ENSOCUG00000000552	-	98	78.717	ENSMODG00000003473	-	98	77.476	Monodelphis_domestica
ENSOCUG00000000552	-	92	67.521	ENSMALG00000014280	hnrnpm	88	67.521	Monopterus_albus
ENSOCUG00000000552	-	98	97.250	MGP_CAROLIEiJ_G0021413	Hnrnpm	100	97.250	Mus_caroli
ENSOCUG00000000552	-	98	96.961	ENSMUSG00000059208	Hnrnpm	100	96.961	Mus_musculus
ENSOCUG00000000552	-	98	97.106	MGP_PahariEiJ_G0020418	Hnrnpm	100	97.106	Mus_pahari
ENSOCUG00000000552	-	98	97.106	MGP_SPRETEiJ_G0022325	Hnrnpm	100	97.106	Mus_spretus
ENSOCUG00000000552	-	100	91.733	ENSMPUG00000007241	HNRNPM	93	89.467	Mustela_putorius_furo
ENSOCUG00000000552	-	99	91.104	ENSMLUG00000025231	-	99	62.947	Myotis_lucifugus
ENSOCUG00000000552	-	100	97.585	ENSMLUG00000006696	-	100	97.585	Myotis_lucifugus
ENSOCUG00000000552	-	98	97.395	ENSNGAG00000003707	Hnrnpm	100	97.395	Nannospalax_galili
ENSOCUG00000000552	-	98	67.489	ENSNGAG00000017657	-	88	96.552	Nannospalax_galili
ENSOCUG00000000552	-	62	67.241	ENSNBRG00000015999	hnrnpm	89	67.241	Neolamprologus_brichardi
ENSOCUG00000000552	-	98	80.464	ENSMEUG00000004789	HNRNPM	98	78.442	Notamacropus_eugenii
ENSOCUG00000000552	-	89	91.549	ENSOPRG00000001943	HNRNPM	80	91.549	Ochotona_princeps
ENSOCUG00000000552	-	90	81.833	ENSODEG00000004347	-	100	80.095	Octodon_degus
ENSOCUG00000000552	-	98	83.068	ENSODEG00000009194	-	98	81.268	Octodon_degus
ENSOCUG00000000552	-	96	85.652	ENSODEG00000010314	-	93	85.376	Octodon_degus
ENSOCUG00000000552	-	96	84.071	ENSODEG00000011442	-	98	82.596	Octodon_degus
ENSOCUG00000000552	-	92	69.828	ENSONIG00000001758	hnrnpm	85	69.231	Oreochromis_niloticus
ENSOCUG00000000552	-	86	83.893	ENSOANG00000010259	HNRNPM	100	80.761	Ornithorhynchus_anatinus
ENSOCUG00000000552	-	92	62.931	ENSORLG00000005400	hnrnpm	88	62.393	Oryzias_latipes
ENSOCUG00000000552	-	92	62.393	ENSORLG00020022108	hnrnpm	96	62.393	Oryzias_latipes_hni
ENSOCUG00000000552	-	92	62.931	ENSORLG00015019809	hnrnpm	91	62.393	Oryzias_latipes_hsok
ENSOCUG00000000552	-	96	58.389	ENSOMEG00000013075	hnrnpm	85	67.500	Oryzias_melastigma
ENSOCUG00000000552	-	100	98.153	ENSOGAG00000030987	HNRNPM	100	98.153	Otolemur_garnettii
ENSOCUG00000000552	-	64	74.797	ENSOGAG00000032900	-	96	76.286	Otolemur_garnettii
ENSOCUG00000000552	-	100	97.447	ENSOARG00000003961	HNRNPM	100	95.803	Ovis_aries
ENSOCUG00000000552	-	100	95.170	ENSPPAG00000039365	HNRNPM	100	95.369	Pan_paniscus
ENSOCUG00000000552	-	98	98.553	ENSPPRG00000009284	HNRNPM	100	98.553	Panthera_pardus
ENSOCUG00000000552	-	93	94.946	ENSPTIG00000003024	HNRNPM	94	94.946	Panthera_tigris_altaica
ENSOCUG00000000552	-	100	95.170	ENSPTRG00000010424	HNRNPM	100	95.369	Pan_troglodytes
ENSOCUG00000000552	-	98	98.263	ENSPANG00000000283	HNRNPM	100	98.263	Papio_anubis
ENSOCUG00000000552	-	93	52.593	ENSPKIG00000001332	hnrnpm	99	51.806	Paramormyrops_kingsleyae
ENSOCUG00000000552	-	93	66.527	ENSPSIG00000011477	HNRNPM	100	66.109	Pelodiscus_sinensis
ENSOCUG00000000552	-	92	62.500	ENSPMGG00000012793	hnrnpm	89	60.317	Periophthalmus_magnuspinnatus
ENSOCUG00000000552	-	98	97.685	ENSPEMG00000009260	Hnrnpm	100	97.685	Peromyscus_maniculatus_bairdii
ENSOCUG00000000552	-	98	81.358	ENSPCIG00000020115	HNRNPM	100	83.362	Phascolarctos_cinereus
ENSOCUG00000000552	-	88	62.500	ENSPFOG00000013612	hnrnpm	99	49.381	Poecilia_formosa
ENSOCUG00000000552	-	74	82.716	ENSPLAG00000011139	hnrnpm	87	64.706	Poecilia_latipinna
ENSOCUG00000000552	-	93	61.538	ENSPMEG00000011182	hnrnpm	88	61.538	Poecilia_mexicana
ENSOCUG00000000552	-	99	52.941	ENSPREG00000016114	hnrnpm	87	63.846	Poecilia_reticulata
ENSOCUG00000000552	-	98	98.119	ENSPPYG00000009506	HNRNPM	100	98.119	Pongo_abelii
ENSOCUG00000000552	-	98	90.959	ENSPCAG00000009678	HNRNPM	100	90.959	Procavia_capensis
ENSOCUG00000000552	-	100	96.875	ENSPCOG00000020227	HNRNPM	100	92.877	Propithecus_coquereli
ENSOCUG00000000552	-	98	91.654	ENSPVAG00000009647	HNRNPM	100	91.654	Pteropus_vampyrus
ENSOCUG00000000552	-	92	67.241	ENSPNYG00000006542	hnrnpm	89	67.241	Pundamilia_nyererei
ENSOCUG00000000552	-	92	50.914	ENSPNAG00000020740	hnrnpm	97	50.992	Pygocentrus_nattereri
ENSOCUG00000000552	-	98	97.250	ENSRNOG00000007921	Hnrnpm	100	97.250	Rattus_norvegicus
ENSOCUG00000000552	-	98	94.136	ENSRBIG00000039870	-	99	94.136	Rhinopithecus_bieti
ENSOCUG00000000552	-	98	83.151	ENSRBIG00000041503	HNRNPM	100	92.769	Rhinopithecus_bieti
ENSOCUG00000000552	-	98	95.382	ENSRROG00000033189	-	99	95.382	Rhinopithecus_roxellana
ENSOCUG00000000552	-	98	98.119	ENSRROG00000038240	-	100	98.119	Rhinopithecus_roxellana
ENSOCUG00000000552	-	99	96.848	ENSSBOG00000032416	HNRNPM	100	96.848	Saimiri_boliviensis_boliviensis
ENSOCUG00000000552	-	87	78.108	ENSSBOG00000022413	-	96	86.867	Saimiri_boliviensis_boliviensis
ENSOCUG00000000552	-	88	85.237	ENSSHAG00000005864	HNRNPM	100	84.710	Sarcophilus_harrisii
ENSOCUG00000000552	-	92	52.806	ENSSFOG00015008815	hnrnpm	98	52.991	Scleropages_formosus
ENSOCUG00000000552	-	79	71.552	ENSSMAG00000003992	hnrnpm	88	70.940	Scophthalmus_maximus
ENSOCUG00000000552	-	92	52.459	ENSSDUG00000002188	hnrnpm	99	51.429	Seriola_dumerili
ENSOCUG00000000552	-	62	68.103	ENSSLDG00000016713	hnrnpm	88	67.521	Seriola_lalandi_dorsalis
ENSOCUG00000000552	-	71	100.000	ENSSARG00000000267	HNRNPM	72	100.000	Sorex_araneus
ENSOCUG00000000552	-	93	66.338	ENSSPUG00000002270	HNRNPM	98	65.590	Sphenodon_punctatus
ENSOCUG00000000552	-	92	68.103	ENSSPAG00000023132	hnrnpm	89	68.103	Stegastes_partitus
ENSOCUG00000000552	-	100	97.443	ENSSSCG00000013602	HNRNPM	100	98.599	Sus_scrofa
ENSOCUG00000000552	-	83	69.391	ENSTGUG00000000938	HNRNPM	100	67.478	Taeniopygia_guttata
ENSOCUG00000000552	-	92	48.983	ENSTRUG00000013783	hnrnpm	98	50.000	Takifugu_rubripes
ENSOCUG00000000552	-	92	48.757	ENSTNIG00000015530	hnrnpm	100	50.769	Tetraodon_nigroviridis
ENSOCUG00000000552	-	71	87.831	ENSTBEG00000008718	HNRNPM	78	80.952	Tupaia_belangeri
ENSOCUG00000000552	-	96	87.448	ENSTTRG00000009769	HNRNPM	98	85.914	Tursiops_truncatus
ENSOCUG00000000552	-	100	95.319	ENSUAMG00000005710	HNRNPM	99	91.605	Ursus_americanus
ENSOCUG00000000552	-	88	93.116	ENSUMAG00000014575	HNRNPM	97	93.116	Ursus_maritimus
ENSOCUG00000000552	-	98	81.361	ENSVPAG00000004215	HNRNPM	100	81.361	Vicugna_pacos
ENSOCUG00000000552	-	96	89.412	ENSVVUG00000024984	HNRNPM	100	90.563	Vulpes_vulpes
ENSOCUG00000000552	-	92	55.477	ENSXETG00000001777	hnrnpm	100	55.319	Xenopus_tropicalis
ENSOCUG00000000552	-	93	50.777	ENSXCOG00000002651	hnrnpm	87	46.847	Xiphophorus_couchianus
ENSOCUG00000000552	-	88	61.818	ENSXMAG00000018502	hnrnpm	83	67.347	Xiphophorus_maculatus