EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000001016 (Gene tree)
Gene ID: 100339721
Gene Symbol: CHD9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 172153 bases
Position: chr5:9598364-9770516
Accession: 100339721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000000879	ResIII	PF04851.15	8.3e-07	1	1
ENSOCUP00000000879	BRK	PF07533.16	5.9e-31	1	2
ENSOCUP00000000879	BRK	PF07533.16	5.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000001017	CHD9-201	12337	XM_008257294	ENSOCUP00000000879	2448 (aa)	-	G1SEJ5

Gene Model

Click here to download ENSOCUG00000001016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000001016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000001016	CHD9	86	62.087	ENSOCUG00000012394	CHD6	78	64.248
ENSOCUG00000001016	CHD9	68	68.515	ENSOCUG00000010822	CHD8	69	68.622
ENSOCUG00000001016	CHD9	89	58.707	ENSOCUG00000010034	CHD7	89	67.468

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000001016	CHD9	99	97.239	ENSG00000177200	CHD9	100	97.239	Homo_sapiens
ENSOCUG00000001016	CHD9	96	69.691	ENSAPOG00000023034	chd9	99	68.417	Acanthochromis_polyacanthus
ENSOCUG00000001016	CHD9	99	97.313	ENSAMEG00000016232	CHD9	83	97.313	Ailuropoda_melanoleuca
ENSOCUG00000001016	CHD9	94	69.881	ENSACIG00000004097	chd9	56	72.442	Amphilophus_citrinellus
ENSOCUG00000001016	CHD9	96	69.813	ENSAOCG00000005487	chd9	99	68.778	Amphiprion_ocellaris
ENSOCUG00000001016	CHD9	96	69.731	ENSAPEG00000009859	chd9	99	68.737	Amphiprion_percula
ENSOCUG00000001016	CHD9	94	71.876	ENSATEG00000002748	chd9	84	69.413	Anabas_testudineus
ENSOCUG00000001016	CHD9	98	87.495	ENSAPLG00000002826	CHD9	57	91.201	Anas_platyrhynchos
ENSOCUG00000001016	CHD9	67	89.381	ENSACAG00000016150	CHD9	83	84.111	Anolis_carolinensis
ENSOCUG00000001016	CHD9	99	97.351	ENSANAG00000015630	CHD9	100	96.703	Aotus_nancymaae
ENSOCUG00000001016	CHD9	94	70.290	ENSACLG00000016899	chd9	58	74.232	Astatotilapia_calliptera
ENSOCUG00000001016	CHD9	98	67.312	ENSAMXG00000005652	chd9	69	74.368	Astyanax_mexicanus
ENSOCUG00000001016	CHD9	99	96.319	ENSBTAG00000002287	CHD9	83	96.319	Bos_taurus
ENSOCUG00000001016	CHD9	99	96.318	ENSCJAG00000001573	CHD9	100	97.070	Callithrix_jacchus
ENSOCUG00000001016	CHD9	99	97.559	ENSCAFG00000009699	CHD9	83	97.559	Canis_familiaris
ENSOCUG00000001016	CHD9	99	97.559	ENSCAFG00020002879	CHD9	100	97.802	Canis_lupus_dingo
ENSOCUG00000001016	CHD9	99	97.393	ENSTSYG00000007693	CHD9	100	98.168	Carlito_syrichta
ENSOCUG00000001016	CHD9	77	75.372	ENSCAPG00000011604	CHD9	62	75.778	Cavia_aperea
ENSOCUG00000001016	CHD9	99	92.012	ENSCPOG00000036544	CHD9	83	91.970	Cavia_porcellus
ENSOCUG00000001016	CHD9	99	96.523	ENSCCAG00000036178	CHD9	100	96.337	Cebus_capucinus
ENSOCUG00000001016	CHD9	99	96.526	ENSCATG00000036753	CHD9	100	96.703	Cercocebus_atys
ENSOCUG00000001016	CHD9	99	96.399	ENSCLAG00000007137	CHD9	100	97.368	Chinchilla_lanigera
ENSOCUG00000001016	CHD9	99	97.189	ENSCSAG00000005311	CHD9	83	97.189	Chlorocebus_sabaeus
ENSOCUG00000001016	CHD9	69	98.077	ENSCHOG00000003935	CHD9	60	98.077	Choloepus_hoffmanni
ENSOCUG00000001016	CHD9	98	88.375	ENSCPBG00000012459	CHD9	82	91.763	Chrysemys_picta_bellii
ENSOCUG00000001016	CHD9	99	97.229	ENSCANG00000030349	CHD9	100	96.703	Colobus_angolensis_palliatus
ENSOCUG00000001016	CHD9	98	93.860	ENSCGRG00001016150	Chd9	83	93.275	Cricetulus_griseus_chok1gshd
ENSOCUG00000001016	CHD9	98	93.860	ENSCGRG00000012850	Chd9	100	96.682	Cricetulus_griseus_crigri
ENSOCUG00000001016	CHD9	96	66.667	ENSCSEG00000009209	chd9	68	71.454	Cynoglossus_semilaevis
ENSOCUG00000001016	CHD9	94	70.928	ENSCVAG00000016195	chd9	84	68.735	Cyprinodon_variegatus
ENSOCUG00000001016	CHD9	67	72.515	ENSDARG00000074498	chd9	69	73.235	Danio_rerio
ENSOCUG00000001016	CHD9	96	95.070	ENSDNOG00000006045	CHD9	100	95.538	Dasypus_novemcinctus
ENSOCUG00000001016	CHD9	82	94.246	ENSDORG00000008523	-	100	94.345	Dipodomys_ordii
ENSOCUG00000001016	CHD9	91	96.842	ENSETEG00000009565	CHD9	77	96.842	Echinops_telfairi
ENSOCUG00000001016	CHD9	99	97.104	ENSEASG00005014832	CHD9	99	96.076	Equus_asinus_asinus
ENSOCUG00000001016	CHD9	99	97.105	ENSECAG00000011505	CHD9	83	97.105	Equus_caballus
ENSOCUG00000001016	CHD9	76	97.790	ENSEEUG00000014515	CHD9	69	97.790	Erinaceus_europaeus
ENSOCUG00000001016	CHD9	83	74.902	ENSELUG00000006031	chd9	97	67.145	Esox_lucius
ENSOCUG00000001016	CHD9	99	97.145	ENSFCAG00000022534	CHD9	100	97.436	Felis_catus
ENSOCUG00000001016	CHD9	98	87.754	ENSFALG00000013276	CHD9	99	87.796	Ficedula_albicollis
ENSOCUG00000001016	CHD9	99	96.358	ENSFDAG00000021037	CHD9	83	96.358	Fukomys_damarensis
ENSOCUG00000001016	CHD9	94	71.125	ENSFHEG00000006068	chd9	96	68.587	Fundulus_heteroclitus
ENSOCUG00000001016	CHD9	80	76.881	ENSGMOG00000006040	chd9	83	77.001	Gadus_morhua
ENSOCUG00000001016	CHD9	93	89.054	ENSGALG00000039178	CHD9	82	88.536	Gallus_gallus
ENSOCUG00000001016	CHD9	96	68.854	ENSGAFG00000010014	chd9	99	67.524	Gambusia_affinis
ENSOCUG00000001016	CHD9	90	75.397	ENSGACG00000016694	chd9	93	75.076	Gasterosteus_aculeatus
ENSOCUG00000001016	CHD9	99	97.146	ENSGGOG00000014816	CHD9	100	97.070	Gorilla_gorilla
ENSOCUG00000001016	CHD9	96	69.438	ENSHBUG00000023322	chd9	98	69.580	Haplochromis_burtoni
ENSOCUG00000001016	CHD9	99	95.944	ENSHGLG00000014938	CHD9	100	97.826	Heterocephalus_glaber_female
ENSOCUG00000001016	CHD9	96	67.675	ENSHCOG00000000937	chd9	97	68.091	Hippocampus_comes
ENSOCUG00000001016	CHD9	97	69.208	ENSIPUG00000016448	chd9	97	73.455	Ictalurus_punctatus
ENSOCUG00000001016	CHD9	99	96.565	ENSSTOG00000022273	CHD9	100	98.398	Ictidomys_tridecemlineatus
ENSOCUG00000001016	CHD9	82	93.198	ENSJJAG00000015741	-	100	93.793	Jaculus_jaculus
ENSOCUG00000001016	CHD9	96	69.435	ENSKMAG00000016784	chd9	80	69.541	Kryptolebias_marmoratus
ENSOCUG00000001016	CHD9	96	68.357	ENSLBEG00000012077	chd9	99	67.684	Labrus_bergylta
ENSOCUG00000001016	CHD9	98	76.126	ENSLACG00000005557	CHD9	57	77.557	Latimeria_chalumnae
ENSOCUG00000001016	CHD9	98	74.199	ENSLOCG00000007225	chd9	99	73.699	Lepisosteus_oculatus
ENSOCUG00000001016	CHD9	99	96.318	ENSLAFG00000015374	CHD9	83	96.318	Loxodonta_africana
ENSOCUG00000001016	CHD9	99	97.270	ENSMFAG00000041354	CHD9	100	96.703	Macaca_fascicularis
ENSOCUG00000001016	CHD9	99	97.270	ENSMMUG00000016310	CHD9	100	96.703	Macaca_mulatta
ENSOCUG00000001016	CHD9	99	97.189	ENSMNEG00000031494	CHD9	83	97.189	Macaca_nemestrina
ENSOCUG00000001016	CHD9	99	97.229	ENSMLEG00000043219	CHD9	100	96.703	Mandrillus_leucophaeus
ENSOCUG00000001016	CHD9	94	69.992	ENSMAMG00000003909	chd9	83	67.459	Mastacembelus_armatus
ENSOCUG00000001016	CHD9	96	69.751	ENSMZEG00005006581	chd9	68	74.751	Maylandia_zebra
ENSOCUG00000001016	CHD9	98	82.980	ENSMGAG00000004642	CHD9	60	85.628	Meleagris_gallopavo
ENSOCUG00000001016	CHD9	99	96.856	ENSMICG00000016679	CHD9	100	96.703	Microcebus_murinus
ENSOCUG00000001016	CHD9	95	70.177	ENSMMOG00000016406	chd9	59	73.666	Mola_mola
ENSOCUG00000001016	CHD9	86	81.699	ENSMODG00000013142	-	99	92.235	Monodelphis_domestica
ENSOCUG00000001016	CHD9	94	70.029	ENSMALG00000013306	chd9	57	73.716	Monopterus_albus
ENSOCUG00000001016	CHD9	98	93.194	MGP_CAROLIEiJ_G0031364	Chd9	83	92.735	Mus_caroli
ENSOCUG00000001016	CHD9	98	92.899	ENSMUSG00000056608	Chd9	100	95.423	Mus_musculus
ENSOCUG00000001016	CHD9	98	90.909	MGP_PahariEiJ_G0022964	Chd9	82	90.450	Mus_pahari
ENSOCUG00000001016	CHD9	98	92.941	MGP_SPRETEiJ_G0032483	Chd9	83	92.439	Mus_spretus
ENSOCUG00000001016	CHD9	99	97.145	ENSMPUG00000003285	CHD9	83	97.145	Mustela_putorius_furo
ENSOCUG00000001016	CHD9	99	95.240	ENSMLUG00000004456	CHD9	83	95.240	Myotis_lucifugus
ENSOCUG00000001016	CHD9	96	69.190	ENSNBRG00000009423	chd9	68	74.620	Neolamprologus_brichardi
ENSOCUG00000001016	CHD9	87	97.693	ENSNLEG00000001026	CHD9	81	97.693	Nomascus_leucogenys
ENSOCUG00000001016	CHD9	75	96.078	ENSMEUG00000008222	-	70	96.078	Notamacropus_eugenii
ENSOCUG00000001016	CHD9	78	100.000	ENSOPRG00000011168	CHD9	68	97.429	Ochotona_princeps
ENSOCUG00000001016	CHD9	98	95.532	ENSODEG00000004466	CHD9	83	95.031	Octodon_degus
ENSOCUG00000001016	CHD9	94	71.917	ENSONIG00000002816	chd9	68	75.582	Oreochromis_niloticus
ENSOCUG00000001016	CHD9	99	91.198	ENSOANG00000013401	CHD9	83	91.116	Ornithorhynchus_anatinus
ENSOCUG00000001016	CHD9	96	68.958	ENSORLG00000013810	chd9	99	67.026	Oryzias_latipes
ENSOCUG00000001016	CHD9	94	70.749	ENSORLG00020020665	chd9	83	67.722	Oryzias_latipes_hni
ENSOCUG00000001016	CHD9	96	68.517	ENSORLG00015019126	chd9	96	69.002	Oryzias_latipes_hsok
ENSOCUG00000001016	CHD9	55	77.526	ENSOMEG00000015978	chd9	74	76.679	Oryzias_melastigma
ENSOCUG00000001016	CHD9	99	96.590	ENSOGAG00000002110	CHD9	84	96.590	Otolemur_garnettii
ENSOCUG00000001016	CHD9	99	96.117	ENSOARG00000017664	CHD9	83	95.250	Ovis_aries
ENSOCUG00000001016	CHD9	98	96.267	ENSPPAG00000039388	-	100	96.267	Pan_paniscus
ENSOCUG00000001016	CHD9	99	97.104	ENSPPRG00000004801	CHD9	100	97.070	Panthera_pardus
ENSOCUG00000001016	CHD9	99	95.904	ENSPTIG00000021854	CHD9	100	94.820	Panthera_tigris_altaica
ENSOCUG00000001016	CHD9	99	97.352	ENSPTRG00000008113	CHD9	100	97.070	Pan_troglodytes
ENSOCUG00000001016	CHD9	99	97.281	ENSPANG00000019307	CHD9	100	97.281	Papio_anubis
ENSOCUG00000001016	CHD9	95	70.814	ENSPKIG00000021876	chd9	69	76.946	Paramormyrops_kingsleyae
ENSOCUG00000001016	CHD9	95	67.325	ENSPKIG00000025401	-	56	75.114	Paramormyrops_kingsleyae
ENSOCUG00000001016	CHD9	56	90.264	ENSPSIG00000008099	CHD9	73	90.264	Pelodiscus_sinensis
ENSOCUG00000001016	CHD9	70	56.808	ENSPMAG00000006035	-	72	67.739	Petromyzon_marinus
ENSOCUG00000001016	CHD9	85	90.483	ENSPCIG00000017215	CHD9	99	88.381	Phascolarctos_cinereus
ENSOCUG00000001016	CHD9	94	70.266	ENSPFOG00000015839	chd9	81	68.074	Poecilia_formosa
ENSOCUG00000001016	CHD9	96	69.603	ENSPLAG00000011118	chd9	99	68.193	Poecilia_latipinna
ENSOCUG00000001016	CHD9	94	70.921	ENSPMEG00000015106	chd9	82	68.503	Poecilia_mexicana
ENSOCUG00000001016	CHD9	94	71.588	ENSPREG00000006473	chd9	99	67.527	Poecilia_reticulata
ENSOCUG00000001016	CHD9	99	97.187	ENSPPYG00000007348	CHD9	83	97.187	Pongo_abelii
ENSOCUG00000001016	CHD9	74	96.691	ENSPCAG00000007564	CHD9	70	96.691	Procavia_capensis
ENSOCUG00000001016	CHD9	99	95.656	ENSPCOG00000028433	CHD9	100	97.802	Propithecus_coquereli
ENSOCUG00000001016	CHD9	96	94.044	ENSPVAG00000015617	CHD9	81	94.262	Pteropus_vampyrus
ENSOCUG00000001016	CHD9	96	69.393	ENSPNYG00000010947	chd9	68	74.620	Pundamilia_nyererei
ENSOCUG00000001016	CHD9	94	71.749	ENSPNAG00000024141	chd9	99	69.096	Pygocentrus_nattereri
ENSOCUG00000001016	CHD9	87	89.469	ENSRNOG00000049302	Chd9	98	86.123	Rattus_norvegicus
ENSOCUG00000001016	CHD9	99	97.311	ENSRBIG00000035553	CHD9	100	97.311	Rhinopithecus_bieti
ENSOCUG00000001016	CHD9	98	97.328	ENSRROG00000033278	CHD9	100	97.328	Rhinopithecus_roxellana
ENSOCUG00000001016	CHD9	99	97.103	ENSSBOG00000030240	CHD9	100	96.337	Saimiri_boliviensis_boliviensis
ENSOCUG00000001016	CHD9	98	90.383	ENSSHAG00000002719	CHD9	83	90.339	Sarcophilus_harrisii
ENSOCUG00000001016	CHD9	97	70.000	ENSSFOG00015001327	chd9	69	75.089	Scleropages_formosus
ENSOCUG00000001016	CHD9	96	71.639	ENSSFOG00015020209	chd9	84	70.206	Scleropages_formosus
ENSOCUG00000001016	CHD9	96	68.473	ENSSMAG00000008953	chd9	96	68.852	Scophthalmus_maximus
ENSOCUG00000001016	CHD9	96	69.077	ENSSDUG00000006139	chd9	99	68.032	Seriola_dumerili
ENSOCUG00000001016	CHD9	96	69.509	ENSSLDG00000017818	chd9	99	68.534	Seriola_lalandi_dorsalis
ENSOCUG00000001016	CHD9	64	97.774	ENSSARG00000010632	CHD9	54	97.774	Sorex_araneus
ENSOCUG00000001016	CHD9	96	69.459	ENSSPAG00000021649	chd9	99	68.377	Stegastes_partitus
ENSOCUG00000001016	CHD9	98	93.134	ENSSSCG00000033591	CHD9	58	96.972	Sus_scrofa
ENSOCUG00000001016	CHD9	87	89.493	ENSTGUG00000007476	CHD9	82	89.587	Taeniopygia_guttata
ENSOCUG00000001016	CHD9	66	76.301	ENSTRUG00000009125	chd9	83	69.050	Takifugu_rubripes
ENSOCUG00000001016	CHD9	73	82.439	ENSTNIG00000003825	chd9	91	82.439	Tetraodon_nigroviridis
ENSOCUG00000001016	CHD9	67	97.748	ENSTBEG00000016052	-	70	97.748	Tupaia_belangeri
ENSOCUG00000001016	CHD9	87	94.586	ENSTTRG00000012674	CHD9	73	95.621	Tursiops_truncatus
ENSOCUG00000001016	CHD9	76	95.340	ENSUAMG00000022706	CHD9	100	97.802	Ursus_americanus
ENSOCUG00000001016	CHD9	84	98.614	ENSUMAG00000004043	CHD9	99	98.614	Ursus_maritimus
ENSOCUG00000001016	CHD9	96	95.395	ENSVPAG00000001374	CHD9	80	95.395	Vicugna_pacos
ENSOCUG00000001016	CHD9	99	97.642	ENSVVUG00000019435	CHD9	83	97.642	Vulpes_vulpes
ENSOCUG00000001016	CHD9	98	77.889	ENSXETG00000000349	chd9	80	83.789	Xenopus_tropicalis
ENSOCUG00000001016	CHD9	94	71.271	ENSXCOG00000012997	chd9	98	68.922	Xiphophorus_couchianus
ENSOCUG00000001016	CHD9	96	69.290	ENSXMAG00000016192	chd9	99	69.356	Xiphophorus_maculatus