EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000001319 (Gene tree)
Gene ID: 100358100
Gene Symbol: SREK1
Alias: -
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 47387 bases
Position: chr11:82239888-82287274
Accession: 100358100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000001137	RRM_1	PF00076.22	2e-22	1	2
ENSOCUP00000001137	RRM_1	PF00076.22	2e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000001319	SREK1-201	1866	XM_008262289	ENSOCUP00000001137	621 (aa)	XP_008260511	G1SF70

Gene Model

Click here to download ENSOCUG00000001319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000001319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000001319	SREK1	97	91.817	ENSG00000153914	SREK1	100	98.684	Homo_sapiens
ENSOCUG00000001319	SREK1	97	92.683	ENSAMEG00000011327	SREK1	98	92.370	Ailuropoda_melanoleuca
ENSOCUG00000001319	SREK1	55	56.374	ENSAOCG00000024379	srek1	50	76.119	Amphiprion_ocellaris
ENSOCUG00000001319	SREK1	57	57.983	ENSATEG00000009450	srek1	50	77.387	Anabas_testudineus
ENSOCUG00000001319	SREK1	57	90.085	ENSAPLG00000003948	-	84	90.855	Anas_platyrhynchos
ENSOCUG00000001319	SREK1	97	92.869	ENSANAG00000031358	SREK1	92	99.441	Aotus_nancymaae
ENSOCUG00000001319	SREK1	97	91.438	ENSBTAG00000007321	SREK1	98	95.918	Bos_taurus
ENSOCUG00000001319	SREK1	97	93.031	ENSCJAG00000015950	SREK1	100	91.683	Callithrix_jacchus
ENSOCUG00000001319	SREK1	97	92.333	ENSCAFG00000007560	SREK1	100	91.033	Canis_familiaris
ENSOCUG00000001319	SREK1	97	92.058	ENSTSYG00000036957	SREK1	98	96.939	Carlito_syrichta
ENSOCUG00000001319	SREK1	97	92.869	ENSCCAG00000020591	SREK1	100	91.683	Cebus_capucinus
ENSOCUG00000001319	SREK1	97	91.843	ENSCATG00000031482	SREK1	92	99.441	Cercocebus_atys
ENSOCUG00000001319	SREK1	97	91.776	ENSCLAG00000005024	SREK1	100	90.097	Chinchilla_lanigera
ENSOCUG00000001319	SREK1	61	89.274	ENSCHOG00000004956	SREK1	61	88.621	Choloepus_hoffmanni
ENSOCUG00000001319	SREK1	97	91.680	ENSCANG00000030421	SREK1	92	99.441	Colobus_angolensis_palliatus
ENSOCUG00000001319	SREK1	97	86.535	ENSCGRG00001015222	-	98	86.885	Cricetulus_griseus_chok1gshd
ENSOCUG00000001319	SREK1	97	86.535	ENSCGRG00000002130	-	98	86.885	Cricetulus_griseus_crigri
ENSOCUG00000001319	SREK1	59	99.176	ENSDNOG00000010327	SREK1	98	91.694	Dasypus_novemcinctus
ENSOCUG00000001319	SREK1	75	85.561	ENSETEG00000012977	SREK1	87	83.032	Echinops_telfairi
ENSOCUG00000001319	SREK1	61	97.610	ENSEEUG00000003430	SREK1	70	97.610	Erinaceus_europaeus
ENSOCUG00000001319	SREK1	81	92.008	ENSFCAG00000040658	-	100	92.203	Felis_catus
ENSOCUG00000001319	SREK1	100	69.208	ENSFALG00000009835	SREK1	98	71.946	Ficedula_albicollis
ENSOCUG00000001319	SREK1	97	92.599	ENSFDAG00000017844	SREK1	98	92.447	Fukomys_damarensis
ENSOCUG00000001319	SREK1	71	87.186	ENSGAGG00000006087	SREK1	96	93.787	Gopherus_agassizii
ENSOCUG00000001319	SREK1	97	91.843	ENSGGOG00000004737	SREK1	92	99.441	Gorilla_gorilla
ENSOCUG00000001319	SREK1	97	90.461	ENSHGLG00000001181	SREK1	100	91.068	Heterocephalus_glaber_female
ENSOCUG00000001319	SREK1	55	98.246	ENSHGLG00100003207	SREK1	100	89.391	Heterocephalus_glaber_male
ENSOCUG00000001319	SREK1	71	57.764	ENSIPUG00000016851	srek1	54	81.004	Ictalurus_punctatus
ENSOCUG00000001319	SREK1	97	93.421	ENSSTOG00000008850	SREK1	98	95.918	Ictidomys_tridecemlineatus
ENSOCUG00000001319	SREK1	97	90.132	ENSLAFG00000013853	SREK1	98	87.192	Loxodonta_africana
ENSOCUG00000001319	SREK1	97	91.843	ENSMFAG00000039823	SREK1	92	99.441	Macaca_fascicularis
ENSOCUG00000001319	SREK1	97	91.843	ENSMMUG00000014586	SREK1	100	91.423	Macaca_mulatta
ENSOCUG00000001319	SREK1	97	91.843	ENSMNEG00000030723	SREK1	92	99.441	Macaca_nemestrina
ENSOCUG00000001319	SREK1	97	91.680	ENSMLEG00000039078	SREK1	92	99.441	Mandrillus_leucophaeus
ENSOCUG00000001319	SREK1	97	86.371	ENSMAUG00000010066	-	98	86.393	Mesocricetus_auratus
ENSOCUG00000001319	SREK1	97	92.869	ENSMICG00000034959	SREK1	98	95.918	Microcebus_murinus
ENSOCUG00000001319	SREK1	96	88.186	ENSMOCG00000001536	-	97	88.372	Microtus_ochrogaster
ENSOCUG00000001319	SREK1	97	84.818	ENSMODG00000019665	SREK1	97	83.059	Monodelphis_domestica
ENSOCUG00000001319	SREK1	72	58.925	ENSMALG00000017086	srek1	91	90.123	Monopterus_albus
ENSOCUG00000001319	SREK1	97	91.680	ENSMPUG00000014736	SREK1	98	92.182	Mustela_putorius_furo
ENSOCUG00000001319	SREK1	97	92.007	ENSNLEG00000003827	SREK1	100	91.618	Nomascus_leucogenys
ENSOCUG00000001319	SREK1	89	88.246	ENSOPRG00000012111	SREK1	97	86.980	Ochotona_princeps
ENSOCUG00000001319	SREK1	79	88.690	ENSODEG00000016450	SREK1	100	88.095	Octodon_degus
ENSOCUG00000001319	SREK1	75	82.378	ENSOANG00000005029	SREK1	99	81.992	Ornithorhynchus_anatinus
ENSOCUG00000001319	SREK1	81	88.515	ENSOGAG00000016463	SREK1	100	88.515	Otolemur_garnettii
ENSOCUG00000001319	SREK1	97	90.792	ENSOARG00000006005	SREK1	98	90.323	Ovis_aries
ENSOCUG00000001319	SREK1	97	84.339	ENSPPAG00000031605	SREK1	92	99.441	Pan_paniscus
ENSOCUG00000001319	SREK1	97	92.962	ENSPPRG00000024617	SREK1	100	91.977	Panthera_pardus
ENSOCUG00000001319	SREK1	97	92.496	ENSPTIG00000006608	SREK1	98	92.508	Panthera_tigris_altaica
ENSOCUG00000001319	SREK1	97	91.680	ENSPTRG00000016936	SREK1	92	99.441	Pan_troglodytes
ENSOCUG00000001319	SREK1	97	91.843	ENSPANG00000008953	SREK1	92	99.441	Papio_anubis
ENSOCUG00000001319	SREK1	97	86.043	ENSPEMG00000024051	-	98	87.377	Peromyscus_maniculatus_bairdii
ENSOCUG00000001319	SREK1	97	92.007	ENSPPYG00000015515	SREK1	98	91.694	Pongo_abelii
ENSOCUG00000001319	SREK1	91	82.669	ENSPCAG00000004955	SREK1	100	83.189	Procavia_capensis
ENSOCUG00000001319	SREK1	97	92.707	ENSPCOG00000026230	SREK1	98	96.939	Propithecus_coquereli
ENSOCUG00000001319	SREK1	97	90.762	ENSPVAG00000009763	SREK1	98	90.291	Pteropus_vampyrus
ENSOCUG00000001319	SREK1	53	77.844	ENSPNAG00000004328	srek1	57	84.452	Pygocentrus_nattereri
ENSOCUG00000001319	SREK1	97	87.934	ENSRBIG00000033818	SREK1	92	96.739	Rhinopithecus_bieti
ENSOCUG00000001319	SREK1	97	91.843	ENSRROG00000017210	SREK1	92	99.441	Rhinopithecus_roxellana
ENSOCUG00000001319	SREK1	97	92.707	ENSSBOG00000031230	SREK1	100	91.489	Saimiri_boliviensis_boliviensis
ENSOCUG00000001319	SREK1	81	80.237	ENSSHAG00000003514	SREK1	100	80.512	Sarcophilus_harrisii
ENSOCUG00000001319	SREK1	69	57.233	ENSSMAG00000011808	srek1	58	81.362	Scophthalmus_maximus
ENSOCUG00000001319	SREK1	76	96.524	ENSSARG00000000795	SREK1	78	96.524	Sorex_araneus
ENSOCUG00000001319	SREK1	81	91.120	ENSSSCG00000032726	SREK1	100	91.506	Sus_scrofa
ENSOCUG00000001319	SREK1	81	70.250	ENSTGUG00000002935	SREK1	100	74.125	Taeniopygia_guttata
ENSOCUG00000001319	SREK1	64	65.764	ENSTNIG00000013463	srek1	68	79.570	Tetraodon_nigroviridis
ENSOCUG00000001319	SREK1	91	91.192	ENSTTRG00000009684	SREK1	100	91.364	Tursiops_truncatus
ENSOCUG00000001319	SREK1	97	91.545	ENSUMAG00000008191	SREK1	98	89.739	Ursus_maritimus
ENSOCUG00000001319	SREK1	91	92.000	ENSVPAG00000008654	SREK1	100	92.522	Vicugna_pacos
ENSOCUG00000001319	SREK1	62	73.284	ENSXETG00000021460	srek1	98	63.604	Xenopus_tropicalis