EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000001420 (Gene tree)
Gene ID: 100328807
Gene Symbol: SYNJ1
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 102298 bases
Position: chr14:162614512-162716809
Accession: 100328807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000001225	Exo_endo_phos	PF03372.23	4.9e-15	1	1
ENSOCUP00000001225	DUF1866	PF08952.11	9.4e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000001424	-	4681	-	ENSOCUP00000001225	1552 (aa)	-	G1SFE4

Gene Model

Click here to download ENSOCUG00000001420's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu00562	Inositol phosphate metabolism	KEGG
ocu01100	Metabolic pathways	KEGG
ocu04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000001420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000001420	SYNJ1	63	54.894	ENSOCUG00000004762	SYNJ2	69	54.035

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000001420	SYNJ1	100	88.403	ENSG00000159082	SYNJ1	100	97.753	Homo_sapiens
ENSOCUG00000001420	SYNJ1	67	77.575	ENSAPOG00000002809	synj1	94	70.208	Acanthochromis_polyacanthus
ENSOCUG00000001420	SYNJ1	100	87.833	ENSAMEG00000015028	SYNJ1	98	87.959	Ailuropoda_melanoleuca
ENSOCUG00000001420	SYNJ1	94	60.276	ENSACIG00000008857	synj1	97	64.996	Amphilophus_citrinellus
ENSOCUG00000001420	SYNJ1	83	77.190	ENSAOCG00000009835	synj1	96	67.388	Amphiprion_ocellaris
ENSOCUG00000001420	SYNJ1	67	76.775	ENSAPEG00000021010	synj1	96	59.640	Amphiprion_percula
ENSOCUG00000001420	SYNJ1	67	76.296	ENSATEG00000002306	synj1	87	61.657	Anabas_testudineus
ENSOCUG00000001420	SYNJ1	100	76.050	ENSAPLG00000011832	SYNJ1	100	76.286	Anas_platyrhynchos
ENSOCUG00000001420	SYNJ1	82	80.901	ENSACAG00000003006	-	98	81.381	Anolis_carolinensis
ENSOCUG00000001420	SYNJ1	100	87.867	ENSANAG00000027325	SYNJ1	98	92.114	Aotus_nancymaae
ENSOCUG00000001420	SYNJ1	82	66.618	ENSACLG00000002255	synj1	95	68.381	Astatotilapia_calliptera
ENSOCUG00000001420	SYNJ1	66	78.173	ENSAMXG00000008208	synj1	95	59.938	Astyanax_mexicanus
ENSOCUG00000001420	SYNJ1	100	86.132	ENSBTAG00000003063	SYNJ1	98	89.311	Bos_taurus
ENSOCUG00000001420	SYNJ1	100	87.967	ENSCJAG00000009187	SYNJ1	98	92.035	Callithrix_jacchus
ENSOCUG00000001420	SYNJ1	100	87.516	ENSCAFG00000009041	SYNJ1	100	87.516	Canis_familiaris
ENSOCUG00000001420	SYNJ1	100	87.204	ENSCAFG00020025776	SYNJ1	100	85.258	Canis_lupus_dingo
ENSOCUG00000001420	SYNJ1	100	85.842	ENSCHIG00000005095	SYNJ1	100	85.971	Capra_hircus
ENSOCUG00000001420	SYNJ1	100	88.340	ENSTSYG00000014541	SYNJ1	98	92.107	Carlito_syrichta
ENSOCUG00000001420	SYNJ1	94	74.757	ENSCAPG00000014483	SYNJ1	99	76.466	Cavia_aperea
ENSOCUG00000001420	SYNJ1	100	87.365	ENSCPOG00000012182	SYNJ1	99	90.513	Cavia_porcellus
ENSOCUG00000001420	SYNJ1	100	85.240	ENSCCAG00000020825	SYNJ1	98	91.877	Cebus_capucinus
ENSOCUG00000001420	SYNJ1	100	88.213	ENSCATG00000033891	SYNJ1	99	92.099	Cercocebus_atys
ENSOCUG00000001420	SYNJ1	100	86.772	ENSCLAG00000009796	SYNJ1	100	96.291	Chinchilla_lanigera
ENSOCUG00000001420	SYNJ1	83	90.819	ENSCSAG00000009654	SYNJ1	98	91.193	Chlorocebus_sabaeus
ENSOCUG00000001420	SYNJ1	85	92.508	ENSCHOG00000012390	SYNJ1	87	92.508	Choloepus_hoffmanni
ENSOCUG00000001420	SYNJ1	78	84.262	ENSCPBG00000006402	SYNJ1	97	84.342	Chrysemys_picta_bellii
ENSOCUG00000001420	SYNJ1	100	88.213	ENSCANG00000031359	SYNJ1	98	92.344	Colobus_angolensis_palliatus
ENSOCUG00000001420	SYNJ1	100	84.430	ENSCGRG00001010861	Synj1	99	89.518	Cricetulus_griseus_chok1gshd
ENSOCUG00000001420	SYNJ1	83	89.365	ENSCGRG00000015749	Synj1	100	95.007	Cricetulus_griseus_crigri
ENSOCUG00000001420	SYNJ1	67	77.069	ENSCSEG00000019614	synj1	99	69.142	Cynoglossus_semilaevis
ENSOCUG00000001420	SYNJ1	67	75.117	ENSCVAG00000019250	synj1	93	66.234	Cyprinodon_variegatus
ENSOCUG00000001420	SYNJ1	70	75.453	ENSDARG00000025011	synj1	98	67.189	Danio_rerio
ENSOCUG00000001420	SYNJ1	100	82.156	ENSDNOG00000010732	SYNJ1	99	82.409	Dasypus_novemcinctus
ENSOCUG00000001420	SYNJ1	77	94.161	ENSETEG00000018674	SYNJ1	78	94.161	Echinops_telfairi
ENSOCUG00000001420	SYNJ1	100	87.644	ENSEASG00005006287	SYNJ1	98	94.802	Equus_asinus_asinus
ENSOCUG00000001420	SYNJ1	100	88.179	ENSECAG00000004829	SYNJ1	100	88.307	Equus_caballus
ENSOCUG00000001420	SYNJ1	92	87.430	ENSEEUG00000005150	SYNJ1	95	87.430	Erinaceus_europaeus
ENSOCUG00000001420	SYNJ1	89	61.057	ENSELUG00000009731	synj1	81	70.826	Esox_lucius
ENSOCUG00000001420	SYNJ1	100	85.705	ENSFCAG00000012498	SYNJ1	97	91.871	Felis_catus
ENSOCUG00000001420	SYNJ1	78	67.035	ENSFALG00000004680	SYNJ1	100	67.281	Ficedula_albicollis
ENSOCUG00000001420	SYNJ1	83	90.575	ENSFDAG00000016818	SYNJ1	100	96.434	Fukomys_damarensis
ENSOCUG00000001420	SYNJ1	89	61.483	ENSFHEG00000017689	synj1	96	59.294	Fundulus_heteroclitus
ENSOCUG00000001420	SYNJ1	64	72.890	ENSGMOG00000014852	synj1	77	72.522	Gadus_morhua
ENSOCUG00000001420	SYNJ1	100	75.553	ENSGALG00000034317	SYNJ1	100	74.401	Gallus_gallus
ENSOCUG00000001420	SYNJ1	67	75.859	ENSGAFG00000019466	synj1	96	58.257	Gambusia_affinis
ENSOCUG00000001420	SYNJ1	83	62.594	ENSGACG00000020575	synj1	95	63.525	Gasterosteus_aculeatus
ENSOCUG00000001420	SYNJ1	100	76.321	ENSGAGG00000022523	SYNJ1	98	82.538	Gopherus_agassizii
ENSOCUG00000001420	SYNJ1	100	88.220	ENSGGOG00000015945	SYNJ1	98	92.271	Gorilla_gorilla
ENSOCUG00000001420	SYNJ1	82	66.618	ENSHBUG00000007774	synj1	95	68.381	Haplochromis_burtoni
ENSOCUG00000001420	SYNJ1	100	87.619	ENSHGLG00000006420	SYNJ1	100	96.148	Heterocephalus_glaber_female
ENSOCUG00000001420	SYNJ1	100	87.452	ENSHGLG00100012591	SYNJ1	100	96.148	Heterocephalus_glaber_male
ENSOCUG00000001420	SYNJ1	82	64.815	ENSHCOG00000012774	synj1	94	62.401	Hippocampus_comes
ENSOCUG00000001420	SYNJ1	67	78.002	ENSIPUG00000010691	SYNJ1	95	61.384	Ictalurus_punctatus
ENSOCUG00000001420	SYNJ1	100	87.429	ENSSTOG00000015806	SYNJ1	99	91.048	Ictidomys_tridecemlineatus
ENSOCUG00000001420	SYNJ1	100	81.922	ENSJJAG00000020168	Synj1	100	81.841	Jaculus_jaculus
ENSOCUG00000001420	SYNJ1	67	76.989	ENSKMAG00000004221	synj1	87	77.233	Kryptolebias_marmoratus
ENSOCUG00000001420	SYNJ1	67	76.177	ENSLBEG00000015081	synj1	96	61.837	Labrus_bergylta
ENSOCUG00000001420	SYNJ1	95	68.961	ENSLACG00000005928	SYNJ1	96	68.526	Latimeria_chalumnae
ENSOCUG00000001420	SYNJ1	95	69.463	ENSLOCG00000009230	synj1	100	68.400	Lepisosteus_oculatus
ENSOCUG00000001420	SYNJ1	100	85.470	ENSLAFG00000011806	SYNJ1	99	85.615	Loxodonta_africana
ENSOCUG00000001420	SYNJ1	98	87.339	ENSMFAG00000018883	SYNJ1	97	91.350	Macaca_fascicularis
ENSOCUG00000001420	SYNJ1	100	88.086	ENSMMUG00000004624	SYNJ1	98	90.902	Macaca_mulatta
ENSOCUG00000001420	SYNJ1	100	88.988	ENSMNEG00000040077	SYNJ1	98	88.213	Macaca_nemestrina
ENSOCUG00000001420	SYNJ1	100	88.150	ENSMLEG00000037029	SYNJ1	98	92.344	Mandrillus_leucophaeus
ENSOCUG00000001420	SYNJ1	67	77.469	ENSMAMG00000013404	synj1	95	58.409	Mastacembelus_armatus
ENSOCUG00000001420	SYNJ1	67	76.746	ENSMZEG00005024358	synj1	97	66.192	Maylandia_zebra
ENSOCUG00000001420	SYNJ1	100	75.689	ENSMGAG00000014522	SYNJ1	100	75.879	Meleagris_gallopavo
ENSOCUG00000001420	SYNJ1	83	89.594	ENSMAUG00000009743	Synj1	100	95.150	Mesocricetus_auratus
ENSOCUG00000001420	SYNJ1	100	88.946	ENSMICG00000034953	SYNJ1	99	92.486	Microcebus_murinus
ENSOCUG00000001420	SYNJ1	76	70.662	ENSMMOG00000010203	synj1	84	75.910	Mola_mola
ENSOCUG00000001420	SYNJ1	82	78.823	ENSMODG00000021073	SYNJ1	98	78.964	Monodelphis_domestica
ENSOCUG00000001420	SYNJ1	67	77.055	ENSMALG00000014015	synj1	88	63.380	Monopterus_albus
ENSOCUG00000001420	SYNJ1	100	84.810	MGP_CAROLIEiJ_G0020951	Synj1	100	95.578	Mus_caroli
ENSOCUG00000001420	SYNJ1	100	85.063	ENSMUSG00000022973	Synj1	100	95.863	Mus_musculus
ENSOCUG00000001420	SYNJ1	100	84.747	MGP_PahariEiJ_G0016656	Synj1	100	95.578	Mus_pahari
ENSOCUG00000001420	SYNJ1	100	85.127	MGP_SPRETEiJ_G0021857	Synj1	100	95.863	Mus_spretus
ENSOCUG00000001420	SYNJ1	100	87.129	ENSMPUG00000001153	SYNJ1	100	87.256	Mustela_putorius_furo
ENSOCUG00000001420	SYNJ1	63	73.626	ENSMLUG00000005764	-	99	71.944	Myotis_lucifugus
ENSOCUG00000001420	SYNJ1	83	89.824	ENSNGAG00000000453	Synj1	100	95.435	Nannospalax_galili
ENSOCUG00000001420	SYNJ1	67	73.180	ENSNBRG00000011936	synj1	95	58.119	Neolamprologus_brichardi
ENSOCUG00000001420	SYNJ1	90	84.816	ENSNLEG00000003734	SYNJ1	97	87.525	Nomascus_leucogenys
ENSOCUG00000001420	SYNJ1	77	73.273	ENSMEUG00000004158	-	73	73.970	Notamacropus_eugenii
ENSOCUG00000001420	SYNJ1	93	94.024	ENSOPRG00000013602	SYNJ1	93	94.024	Ochotona_princeps
ENSOCUG00000001420	SYNJ1	89	65.129	ENSONIG00000004667	synj1	100	66.225	Oreochromis_niloticus
ENSOCUG00000001420	SYNJ1	97	73.006	ENSOANG00000006929	SYNJ1	97	74.554	Ornithorhynchus_anatinus
ENSOCUG00000001420	SYNJ1	67	77.019	ENSORLG00000004320	synj1	92	69.678	Oryzias_latipes
ENSOCUG00000001420	SYNJ1	67	75.072	ENSORLG00020011994	synj1	95	65.555	Oryzias_latipes_hni
ENSOCUG00000001420	SYNJ1	67	76.702	ENSORLG00015018077	synj1	86	62.732	Oryzias_latipes_hsok
ENSOCUG00000001420	SYNJ1	67	76.606	ENSOMEG00000014322	synj1	97	66.667	Oryzias_melastigma
ENSOCUG00000001420	SYNJ1	100	84.552	ENSOGAG00000006010	SYNJ1	98	84.552	Otolemur_garnettii
ENSOCUG00000001420	SYNJ1	100	85.480	ENSOARG00000013414	SYNJ1	97	85.480	Ovis_aries
ENSOCUG00000001420	SYNJ1	100	88.562	ENSPPAG00000026784	SYNJ1	99	92.332	Pan_paniscus
ENSOCUG00000001420	SYNJ1	100	86.907	ENSPPRG00000023469	SYNJ1	97	91.871	Panthera_pardus
ENSOCUG00000001420	SYNJ1	100	86.844	ENSPTIG00000007930	SYNJ1	97	91.792	Panthera_tigris_altaica
ENSOCUG00000001420	SYNJ1	100	88.530	ENSPTRG00000023787	SYNJ1	99	92.332	Pan_troglodytes
ENSOCUG00000001420	SYNJ1	100	87.412	ENSPTRG00000048135	-	98	88.443	Pan_troglodytes
ENSOCUG00000001420	SYNJ1	100	88.150	ENSPANG00000022531	SYNJ1	98	92.344	Papio_anubis
ENSOCUG00000001420	SYNJ1	74	76.121	ENSPKIG00000022603	synj1	94	76.244	Paramormyrops_kingsleyae
ENSOCUG00000001420	SYNJ1	87	63.701	ENSPMGG00000016831	synj1	96	59.427	Periophthalmus_magnuspinnatus
ENSOCUG00000001420	SYNJ1	83	89.808	ENSPEMG00000018767	Synj1	100	95.720	Peromyscus_maniculatus_bairdii
ENSOCUG00000001420	SYNJ1	67	60.248	ENSPMAG00000002887	synj1	79	60.248	Petromyzon_marinus
ENSOCUG00000001420	SYNJ1	100	77.284	ENSPCIG00000016372	SYNJ1	98	84.096	Phascolarctos_cinereus
ENSOCUG00000001420	SYNJ1	82	64.861	ENSPFOG00000016886	synj1	98	65.702	Poecilia_formosa
ENSOCUG00000001420	SYNJ1	84	63.818	ENSPLAG00000017559	synj1	97	65.448	Poecilia_latipinna
ENSOCUG00000001420	SYNJ1	84	63.946	ENSPMEG00000007643	synj1	97	57.690	Poecilia_mexicana
ENSOCUG00000001420	SYNJ1	84	64.454	ENSPREG00000012412	synj1	97	66.793	Poecilia_reticulata
ENSOCUG00000001420	SYNJ1	84	89.903	ENSPPYG00000011365	SYNJ1	96	90.052	Pongo_abelii
ENSOCUG00000001420	SYNJ1	84	92.857	ENSPCAG00000009906	SYNJ1	89	92.857	Procavia_capensis
ENSOCUG00000001420	SYNJ1	97	90.842	ENSPCOG00000024841	SYNJ1	97	90.842	Propithecus_coquereli
ENSOCUG00000001420	SYNJ1	100	82.964	ENSPVAG00000000892	SYNJ1	100	82.964	Pteropus_vampyrus
ENSOCUG00000001420	SYNJ1	67	75.670	ENSPNYG00000022989	synj1	98	65.367	Pundamilia_nyererei
ENSOCUG00000001420	SYNJ1	67	78.152	ENSPNAG00000021119	synj1	91	75.113	Pygocentrus_nattereri
ENSOCUG00000001420	SYNJ1	100	84.287	ENSRNOG00000002051	Synj1	99	90.846	Rattus_norvegicus
ENSOCUG00000001420	SYNJ1	100	88.150	ENSRBIG00000034477	SYNJ1	98	92.186	Rhinopithecus_bieti
ENSOCUG00000001420	SYNJ1	100	88.276	ENSRROG00000039256	SYNJ1	98	92.344	Rhinopithecus_roxellana
ENSOCUG00000001420	SYNJ1	100	87.840	ENSSBOG00000021001	SYNJ1	98	92.035	Saimiri_boliviensis_boliviensis
ENSOCUG00000001420	SYNJ1	99	76.679	ENSSHAG00000008538	SYNJ1	99	76.299	Sarcophilus_harrisii
ENSOCUG00000001420	SYNJ1	95	62.714	ENSSFOG00015006095	synj1	95	62.005	Scleropages_formosus
ENSOCUG00000001420	SYNJ1	89	64.097	ENSSMAG00000018066	synj1	95	65.486	Scophthalmus_maximus
ENSOCUG00000001420	SYNJ1	67	77.438	ENSSDUG00000013058	synj1	89	61.206	Seriola_dumerili
ENSOCUG00000001420	SYNJ1	67	77.852	ENSSLDG00000021406	synj1	96	67.199	Seriola_lalandi_dorsalis
ENSOCUG00000001420	SYNJ1	71	95.677	ENSSARG00000009490	SYNJ1	75	95.677	Sorex_araneus
ENSOCUG00000001420	SYNJ1	99	74.952	ENSSPUG00000012552	SYNJ1	100	73.333	Sphenodon_punctatus
ENSOCUG00000001420	SYNJ1	80	62.463	ENSSPAG00000006812	SYNJ1	96	56.148	Stegastes_partitus
ENSOCUG00000001420	SYNJ1	95	58.616	ENSSPAG00000017029	synj1	96	66.046	Stegastes_partitus
ENSOCUG00000001420	SYNJ1	100	83.535	ENSSSCG00000012035	SYNJ1	98	91.438	Sus_scrofa
ENSOCUG00000001420	SYNJ1	100	75.126	ENSTGUG00000013445	SYNJ1	100	74.701	Taeniopygia_guttata
ENSOCUG00000001420	SYNJ1	75	69.840	ENSTRUG00000006907	synj1	94	67.136	Takifugu_rubripes
ENSOCUG00000001420	SYNJ1	89	64.181	ENSTNIG00000009940	synj1	100	64.624	Tetraodon_nigroviridis
ENSOCUG00000001420	SYNJ1	93	87.055	ENSTBEG00000016298	SYNJ1	92	87.055	Tupaia_belangeri
ENSOCUG00000001420	SYNJ1	100	78.695	ENSTTRG00000002222	SYNJ1	100	78.055	Tursiops_truncatus
ENSOCUG00000001420	SYNJ1	100	86.108	ENSUAMG00000018606	SYNJ1	99	96.674	Ursus_americanus
ENSOCUG00000001420	SYNJ1	97	93.219	ENSUMAG00000018419	SYNJ1	99	96.674	Ursus_maritimus
ENSOCUG00000001420	SYNJ1	87	98.571	ENSVPAG00000001241	SYNJ1	87	98.571	Vicugna_pacos
ENSOCUG00000001420	SYNJ1	100	87.564	ENSVVUG00000023125	SYNJ1	98	90.803	Vulpes_vulpes
ENSOCUG00000001420	SYNJ1	100	66.831	ENSXETG00000009899	synj1	100	65.420	Xenopus_tropicalis
ENSOCUG00000001420	SYNJ1	67	77.085	ENSXCOG00000011896	synj1	97	66.288	Xiphophorus_couchianus
ENSOCUG00000001420	SYNJ1	82	65.011	ENSXMAG00000017524	synj1	98	66.442	Xiphophorus_maculatus