EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOCUG00000001504 (Gene tree)
Gene ID
100341460
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Oryctolagus_cuniculus
Status
putative
Strand
Minus strand
Length
62225 bases
Position
chr19:16260317-16322541
Accession
100341460
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOCUP00000001299tRNA_anti-codonPF01336.253.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOCUT00000001508RPA1-2013493XM_008270927ENSOCUP00000001299646 (aa)XP_008269149G1SFK3
Gene Model
Click here to download ENSOCUG00000001504's gene model file
Pathways
Pathway IDPathway NameSource
ocu03030DNA replicationKEGG
ocu03420Nucleotide excision repairKEGG
ocu03430Mismatch repairKEGG
ocu03440Homologous recombinationKEGG
ocu03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000001504's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOCUG00000001504RPA19062.247ENSAPOG00000019409RPA18162.247Acanthochromis_polyacanthus
ENSOCUG00000001504RPA19959.969ENSAPOG00000011658rpa19960.404Acanthochromis_polyacanthus
ENSOCUG00000001504RPA19986.854ENSAMEG00000007706RPA19886.854Ailuropoda_melanoleuca
ENSOCUG00000001504RPA19556.129ENSACIG00000012881RPA19956.129Amphilophus_citrinellus
ENSOCUG00000001504RPA19655.735ENSACIG00000007277rpa19955.735Amphilophus_citrinellus
ENSOCUG00000001504RPA19951.857ENSAOCG00000009003RPA19953.064Amphiprion_ocellaris
ENSOCUG00000001504RPA19960.625ENSAOCG00000023376rpa19960.755Amphiprion_ocellaris
ENSOCUG00000001504RPA19951.387ENSAPEG00000019132RPA19952.047Amphiprion_percula
ENSOCUG00000001504RPA19960.625ENSAPEG00000008634rpa19960.755Amphiprion_percula
ENSOCUG00000001504RPA19952.444ENSATEG00000006443RPA110052.444Anabas_testudineus
ENSOCUG00000001504RPA19561.501ENSATEG00000022024rpa19961.501Anabas_testudineus
ENSOCUG00000001504RPA19863.932ENSAPLG00000012442RPA110064.074Anas_platyrhynchos
ENSOCUG00000001504RPA19960.709ENSACAG00000014490RPA19961.787Anolis_carolinensis
ENSOCUG00000001504RPA19885.150ENSANAG00000023456RPA110085.150Aotus_nancymaae
ENSOCUG00000001504RPA19955.387ENSACLG00000005223RPA19955.387Astatotilapia_calliptera
ENSOCUG00000001504RPA19461.157ENSACLG00000006640rpa19961.157Astatotilapia_calliptera
ENSOCUG00000001504RPA19959.225ENSAMXG00000008418rpa19959.752Astyanax_mexicanus
ENSOCUG00000001504RPA110086.997ENSBTAG00000009711RPA110086.997Bos_taurus
ENSOCUG00000001504RPA110085.294ENSCJAG00000001848RPA110085.294Callithrix_jacchus
ENSOCUG00000001504RPA110086.533ENSCAFG00000019249RPA110086.533Canis_familiaris
ENSOCUG00000001504RPA110086.533ENSCAFG00020009847RPA110086.533Canis_lupus_dingo
ENSOCUG00000001504RPA110086.997ENSCHIG00000026308RPA110086.997Capra_hircus
ENSOCUG00000001504RPA110087.017ENSTSYG00000003482-10087.017Carlito_syrichta
ENSOCUG00000001504RPA110083.282ENSCPOG00000000035RPA110083.282Cavia_porcellus
ENSOCUG00000001504RPA110074.884ENSCCAG00000010981RPA110074.884Cebus_capucinus
ENSOCUG00000001504RPA19984.341ENSCLAG00000005185-10084.341Chinchilla_lanigera
ENSOCUG00000001504RPA110079.257ENSCLAG00000015045-10079.257Chinchilla_lanigera
ENSOCUG00000001504RPA110074.730ENSCSAG00000013833RPA110074.730Chlorocebus_sabaeus
ENSOCUG00000001504RPA16893.166ENSCHOG00000009454-10093.166Choloepus_hoffmanni
ENSOCUG00000001504RPA19683.819ENSCHOG00000013540-10083.819Choloepus_hoffmanni
ENSOCUG00000001504RPA19975.311ENSCPBG00000020377RPA19976.127Chrysemys_picta_bellii
ENSOCUG00000001504RPA19940.094ENSCING00000023482-9840.094Ciona_intestinalis
ENSOCUG00000001504RPA19882.362ENSCANG00000030911RPA110082.362Colobus_angolensis_palliatus
ENSOCUG00000001504RPA19985.692ENSCGRG00001008197Rpa19985.692Cricetulus_griseus_chok1gshd
ENSOCUG00000001504RPA17987.476ENSCGRG00000000582Rpa19987.476Cricetulus_griseus_crigri
ENSOCUG00000001504RPA19949.768ENSCSEG00000012726RPA19850.990Cynoglossus_semilaevis
ENSOCUG00000001504RPA19958.814ENSCSEG00000013066rpa19958.814Cynoglossus_semilaevis
ENSOCUG00000001504RPA19960.870ENSCVAG00000019431rpa19961.240Cyprinodon_variegatus
ENSOCUG00000001504RPA19652.174ENSCVAG00000013446-9652.174Cyprinodon_variegatus
ENSOCUG00000001504RPA19960.681ENSDARG00000003938rpa19960.681Danio_rerio
ENSOCUG00000001504RPA19985.870ENSDNOG00000017218RPA19985.870Dasypus_novemcinctus
ENSOCUG00000001504RPA110083.901ENSDORG00000006199Rpa110083.901Dipodomys_ordii
ENSOCUG00000001504RPA19939.567FBgn0010173RpA-709839.722Drosophila_melanogaster
ENSOCUG00000001504RPA18386.458ENSETEG00000017608RPA18286.458Echinops_telfairi
ENSOCUG00000001504RPA19887.994ENSEASG00005009372RPA19992.903Equus_asinus_asinus
ENSOCUG00000001504RPA110088.080ENSECAG00000023886RPA110088.080Equus_caballus
ENSOCUG00000001504RPA16591.905ENSEEUG00000002186-6891.905Erinaceus_europaeus
ENSOCUG00000001504RPA18854.211ENSELUG00000006136RPA19954.211Esox_lucius
ENSOCUG00000001504RPA19959.288ENSELUG00000021071rpa19959.443Esox_lucius
ENSOCUG00000001504RPA110084.235ENSFCAG00000006306RPA19984.235Felis_catus
ENSOCUG00000001504RPA110072.573ENSFALG00000006575RPA19972.573Ficedula_albicollis
ENSOCUG00000001504RPA19985.559ENSFDAG00000007720RPA19985.559Fukomys_damarensis
ENSOCUG00000001504RPA19959.161ENSFHEG00000003580rpa19959.161Fundulus_heteroclitus
ENSOCUG00000001504RPA19956.875ENSGMOG00000010382rpa19956.875Gadus_morhua
ENSOCUG00000001504RPA110071.870ENSGALG00000003072RPA19971.870Gallus_gallus
ENSOCUG00000001504RPA19952.283ENSGAFG00000020953RPA19951.959Gambusia_affinis
ENSOCUG00000001504RPA19959.906ENSGAFG00000012916rpa19959.906Gambusia_affinis
ENSOCUG00000001504RPA19958.851ENSGACG00000010856rpa19958.851Gasterosteus_aculeatus
ENSOCUG00000001504RPA19975.466ENSGAGG00000013611RPA19975.466Gopherus_agassizii
ENSOCUG00000001504RPA110083.127ENSGGOG00000014186RPA110083.127Gorilla_gorilla
ENSOCUG00000001504RPA19960.686ENSHBUG00000017773rpa19960.686Haplochromis_burtoni
ENSOCUG00000001504RPA19651.592ENSHBUG00000009348RPA19951.592Haplochromis_burtoni
ENSOCUG00000001504RPA19985.248ENSHGLG00000008846RPA110085.248Heterocephalus_glaber_female
ENSOCUG00000001504RPA110080.341ENSHGLG00100000799-10080.341Heterocephalus_glaber_male
ENSOCUG00000001504RPA110072.291ENSHGLG00100002005-10072.291Heterocephalus_glaber_male
ENSOCUG00000001504RPA19985.248ENSHGLG00100017755-10085.248Heterocephalus_glaber_male
ENSOCUG00000001504RPA19958.942ENSHCOG00000001401rpa19959.815Hippocampus_comes
ENSOCUG00000001504RPA19942.527ENSHCOG00000000351RPA19942.989Hippocampus_comes
ENSOCUG00000001504RPA19959.845ENSIPUG00000004400rpa19959.845Ictalurus_punctatus
ENSOCUG00000001504RPA19881.013ENSSTOG00000022475RPA19881.013Ictidomys_tridecemlineatus
ENSOCUG00000001504RPA19684.951ENSJJAG00000000876Rpa19884.951Jaculus_jaculus
ENSOCUG00000001504RPA19959.346ENSKMAG00000005605rpa19959.627Kryptolebias_marmoratus
ENSOCUG00000001504RPA19952.941ENSKMAG00000000234RPA19952.941Kryptolebias_marmoratus
ENSOCUG00000001504RPA19960.218ENSLBEG00000021604rpa19960.218Labrus_bergylta
ENSOCUG00000001504RPA19662.955ENSLBEG00000002281RPA18562.955Labrus_bergylta
ENSOCUG00000001504RPA17767.800ENSLACG00000007210RPA19967.800Latimeria_chalumnae
ENSOCUG00000001504RPA19964.651ENSLOCG00000006397rpa19964.651Lepisosteus_oculatus
ENSOCUG00000001504RPA19988.958ENSLAFG00000015354RPA110088.958Loxodonta_africana
ENSOCUG00000001504RPA18385.821ENSMFAG00000036138-10085.821Macaca_fascicularis
ENSOCUG00000001504RPA19885.984ENSMMUG00000011604-10085.984Macaca_mulatta
ENSOCUG00000001504RPA110078.793ENSMMUG00000002442-10078.793Macaca_mulatta
ENSOCUG00000001504RPA18585.835ENSMNEG00000029837-10085.835Macaca_nemestrina
ENSOCUG00000001504RPA110083.127ENSMNEG00000031632-10083.127Macaca_nemestrina
ENSOCUG00000001504RPA19880.945ENSMLEG00000038768-10080.945Mandrillus_leucophaeus
ENSOCUG00000001504RPA19960.998ENSMAMG00000017993rpa19960.998Mastacembelus_armatus
ENSOCUG00000001504RPA19862.963ENSMAMG00000020097RPA19950.791Mastacembelus_armatus
ENSOCUG00000001504RPA19960.686ENSMZEG00005007551rpa19960.686Maylandia_zebra
ENSOCUG00000001504RPA19955.387ENSMZEG00005024731RPA19955.387Maylandia_zebra
ENSOCUG00000001504RPA19971.716ENSMGAG00000005315RPA19971.716Meleagris_gallopavo
ENSOCUG00000001504RPA19885.238ENSMAUG00000010474Rpa19985.238Mesocricetus_auratus
ENSOCUG00000001504RPA110086.378ENSMICG00000012867RPA110086.378Microcebus_murinus
ENSOCUG00000001504RPA19984.603ENSMOCG00000013019Rpa19984.603Microtus_ochrogaster
ENSOCUG00000001504RPA19859.019ENSMMOG00000014292rpa19959.807Mola_mola
ENSOCUG00000001504RPA19854.041ENSMMOG00000010868RPA19760.398Mola_mola
ENSOCUG00000001504RPA19981.085ENSMODG00000010549RPA19981.085Monodelphis_domestica
ENSOCUG00000001504RPA19961.526ENSMALG00000011453rpa19961.682Monopterus_albus
ENSOCUG00000001504RPA19562.471ENSMALG00000001208RPA18262.471Monopterus_albus
ENSOCUG00000001504RPA19983.282MGP_CAROLIEiJ_G0016734Rpa19983.282Mus_caroli
ENSOCUG00000001504RPA19982.426ENSMUSG00000000751Rpa19982.426Mus_musculus
ENSOCUG00000001504RPA19984.759MGP_PahariEiJ_G0017871Rpa19984.759Mus_pahari
ENSOCUG00000001504RPA19982.453MGP_SPRETEiJ_G0017577Rpa19982.453Mus_spretus
ENSOCUG00000001504RPA110086.068ENSMPUG00000013119RPA110086.068Mustela_putorius_furo
ENSOCUG00000001504RPA110083.257ENSMLUG00000006113RPA110083.257Myotis_lucifugus
ENSOCUG00000001504RPA19981.579ENSNGAG00000004522Rpa19781.579Nannospalax_galili
ENSOCUG00000001504RPA19654.006ENSNBRG00000009672RPA19553.130Neolamprologus_brichardi
ENSOCUG00000001504RPA19460.984ENSNBRG00000020595rpa19960.984Neolamprologus_brichardi
ENSOCUG00000001504RPA110085.139ENSNLEG00000017149RPA110085.139Nomascus_leucogenys
ENSOCUG00000001504RPA19870.662ENSMEUG00000006714RPA19970.662Notamacropus_eugenii
ENSOCUG00000001504RPA110081.579ENSODEG00000009038RPA110081.579Octodon_degus
ENSOCUG00000001504RPA19961.515ENSONIG00000013135rpa19961.515Oreochromis_niloticus
ENSOCUG00000001504RPA19880.095ENSOANG00000010880RPA19980.253Ornithorhynchus_anatinus
ENSOCUG00000001504RPA19960.469ENSORLG00000004856rpa19960.469Oryzias_latipes
ENSOCUG00000001504RPA19951.923ENSORLG00000003368RPA19951.923Oryzias_latipes
ENSOCUG00000001504RPA19950.727ENSORLG00020015284RPA19950.727Oryzias_latipes_hni
ENSOCUG00000001504RPA19960.781ENSORLG00020008980rpa19960.781Oryzias_latipes_hni
ENSOCUG00000001504RPA16462.077ENSORLG00015005867-9462.077Oryzias_latipes_hsok
ENSOCUG00000001504RPA19960.781ENSORLG00015013982rpa19960.781Oryzias_latipes_hsok
ENSOCUG00000001504RPA19952.410ENSORLG00015020383RPA19952.410Oryzias_latipes_hsok
ENSOCUG00000001504RPA19958.125ENSOMEG00000004704rpa19958.125Oryzias_melastigma
ENSOCUG00000001504RPA19952.469ENSOMEG00000011040RPA19953.583Oryzias_melastigma
ENSOCUG00000001504RPA19479.365ENSOGAG00000029379-10079.365Otolemur_garnettii
ENSOCUG00000001504RPA110086.687ENSOGAG00000005581-10086.687Otolemur_garnettii
ENSOCUG00000001504RPA110086.997ENSOARG00000014479RPA110086.997Ovis_aries
ENSOCUG00000001504RPA110085.449ENSPPAG00000039680RPA110085.449Pan_paniscus
ENSOCUG00000001504RPA110084.235ENSPPRG00000011807RPA19984.235Panthera_pardus
ENSOCUG00000001504RPA110084.080ENSPTIG00000007898RPA19984.080Panthera_tigris_altaica
ENSOCUG00000001504RPA110085.449ENSPTRG00000008539RPA110085.449Pan_troglodytes
ENSOCUG00000001504RPA110085.913ENSPANG00000024592RPA110085.913Papio_anubis
ENSOCUG00000001504RPA19559.380ENSPKIG00000008053rpa19459.446Paramormyrops_kingsleyae
ENSOCUG00000001504RPA19775.199ENSPSIG00000015617RPA19975.199Pelodiscus_sinensis
ENSOCUG00000001504RPA19858.768ENSPMGG00000011589rpa19958.926Periophthalmus_magnuspinnatus
ENSOCUG00000001504RPA19951.464ENSPMGG00000000543RPA19953.910Periophthalmus_magnuspinnatus
ENSOCUG00000001504RPA19986.003ENSPEMG00000021061Rpa19986.234Peromyscus_maniculatus_bairdii
ENSOCUG00000001504RPA110079.102ENSPCIG00000019049RPA19979.257Phascolarctos_cinereus
ENSOCUG00000001504RPA19960.559ENSPFOG00000003987rpa19960.559Poecilia_formosa
ENSOCUG00000001504RPA19960.248ENSPLAG00000004984rpa19960.248Poecilia_latipinna
ENSOCUG00000001504RPA19552.492ENSPLAG00000008844-9752.492Poecilia_latipinna
ENSOCUG00000001504RPA19960.559ENSPMEG00000020602rpa19960.732Poecilia_mexicana
ENSOCUG00000001504RPA19552.100ENSPMEG00000003627-9752.100Poecilia_mexicana
ENSOCUG00000001504RPA19950.430ENSPREG00000010119RPA110049.925Poecilia_reticulata
ENSOCUG00000001504RPA19552.769ENSPREG00000010174rpa19652.769Poecilia_reticulata
ENSOCUG00000001504RPA110086.997ENSPCOG00000001799RPA110086.997Propithecus_coquereli
ENSOCUG00000001504RPA110085.139ENSPVAG00000002149RPA110085.139Pteropus_vampyrus
ENSOCUG00000001504RPA19955.083ENSPNYG00000024165RPA19955.083Pundamilia_nyererei
ENSOCUG00000001504RPA19960.842ENSPNYG00000016316rpa19961.120Pundamilia_nyererei
ENSOCUG00000001504RPA19853.555ENSPNAG00000008599rpa19654.173Pygocentrus_nattereri
ENSOCUG00000001504RPA19889.855ENSRNOG00000003123Rpa19984.914Rattus_norvegicus
ENSOCUG00000001504RPA110085.294ENSRBIG00000036587RPA110085.294Rhinopithecus_bieti
ENSOCUG00000001504RPA110080.186ENSRROG00000043278RPA110080.186Rhinopithecus_roxellana
ENSOCUG00000001504RPA16539.211YAR007CRFA16939.211Saccharomyces_cerevisiae
ENSOCUG00000001504RPA19881.546ENSSBOG00000030233RPA19981.546Saimiri_boliviensis_boliviensis
ENSOCUG00000001504RPA19980.125ENSSHAG00000007969RPA19880.967Sarcophilus_harrisii
ENSOCUG00000001504RPA19962.326ENSSFOG00015005362rpa19262.326Scleropages_formosus
ENSOCUG00000001504RPA19950.954ENSSMAG00000019746RPA19951.248Scophthalmus_maximus
ENSOCUG00000001504RPA19961.778ENSSDUG00000011949rpa19961.778Seriola_dumerili
ENSOCUG00000001504RPA19951.143ENSSDUG00000016358RPA19951.425Seriola_dumerili
ENSOCUG00000001504RPA19948.153ENSSLDG00000020784RPA18764.612Seriola_lalandi_dorsalis
ENSOCUG00000001504RPA19962.090ENSSLDG00000011806rpa19962.090Seriola_lalandi_dorsalis
ENSOCUG00000001504RPA19867.559ENSSARG00000007506RPA110067.559Sorex_araneus
ENSOCUG00000001504RPA19771.930ENSSPUG00000007223RPA19971.930Sphenodon_punctatus
ENSOCUG00000001504RPA19656.270ENSSPAG00000011165RPA19955.008Stegastes_partitus
ENSOCUG00000001504RPA19960.530ENSSPAG00000009903rpa19960.530Stegastes_partitus
ENSOCUG00000001504RPA19886.572ENSSSCG00000017822RPA110086.572Sus_scrofa
ENSOCUG00000001504RPA110072.488ENSTGUG00000005775RPA19972.488Taeniopygia_guttata
ENSOCUG00000001504RPA19763.551ENSTRUG00000000405RPA18861.504Takifugu_rubripes
ENSOCUG00000001504RPA19961.189ENSTRUG00000003616rpa19961.189Takifugu_rubripes
ENSOCUG00000001504RPA19962.422ENSTNIG00000016199rpa19962.422Tetraodon_nigroviridis
ENSOCUG00000001504RPA18395.349ENSTBEG00000002709RPA18995.349Tupaia_belangeri
ENSOCUG00000001504RPA19986.822ENSTTRG00000001169RPA19986.822Tursiops_truncatus
ENSOCUG00000001504RPA18996.154ENSUAMG00000015676RPA19796.154Ursus_americanus
ENSOCUG00000001504RPA110087.307ENSUMAG00000009328RPA110087.307Ursus_maritimus
ENSOCUG00000001504RPA110085.139ENSVPAG00000009443RPA110085.139Vicugna_pacos
ENSOCUG00000001504RPA110086.687ENSVVUG00000021715RPA110086.687Vulpes_vulpes
ENSOCUG00000001504RPA19971.139ENSXETG00000013538rpa19972.360Xenopus_tropicalis
ENSOCUG00000001504RPA19358.043ENSXCOG00000010068rpa19558.043Xiphophorus_couchianus
ENSOCUG00000001504RPA19552.657ENSXCOG00000009899-9952.657Xiphophorus_couchianus
ENSOCUG00000001504RPA19958.824ENSXMAG00000004102rpa19960.033Xiphophorus_maculatus
ENSOCUG00000001504RPA19560.669ENSXMAG00000010333RPA18960.669Xiphophorus_maculatus

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