EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000001628 (Gene tree)
Gene ID: 100340615
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 111941 bases
Position: chrGL018759:24426-136366
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000026561	ResIII	PF04851.15	6.6e-09	1	1
ENSOCUP00000001399	ResIII	PF04851.15	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000033515	-	3165	-	ENSOCUP00000026561	1031 (aa)	-	U3KMV2
ENSOCUT00000001632	-	5169	-	ENSOCUP00000001399	1699 (aa)	-	G1SFT5

Gene Model

Click here to download ENSOCUG00000001628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000001628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000001628	-	56	35.528	ENSOCUG00000026731	HELLS	78	34.426
ENSOCUG00000001628	-	50	44.821	ENSOCUG00000013042	SMARCA5	51	44.906
ENSOCUG00000001628	-	64	40.242	ENSOCUG00000001047	SMARCA1	60	40.242
ENSOCUG00000001628	-	52	44.074	ENSOCUG00000009336	CHD1L	56	44.074

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000001628	-	99	97.573	ENSG00000173575	CHD2	100	98.246	Homo_sapiens
ENSOCUG00000001628	-	93	77.426	ENSAPOG00000008913	chd2	100	66.649	Acanthochromis_polyacanthus
ENSOCUG00000001628	-	99	98.058	ENSAMEG00000010805	-	100	96.181	Ailuropoda_melanoleuca
ENSOCUG00000001628	-	93	76.049	ENSAOCG00000016332	chd2	100	66.022	Amphiprion_ocellaris
ENSOCUG00000001628	-	93	77.175	ENSAPEG00000016676	chd2	100	66.485	Amphiprion_percula
ENSOCUG00000001628	-	93	76.915	ENSATEG00000005246	chd2	100	66.343	Anabas_testudineus
ENSOCUG00000001628	-	99	89.981	ENSAPLG00000011141	-	100	80.870	Anas_platyrhynchos
ENSOCUG00000001628	-	97	83.778	ENSACAG00000000088	-	99	73.470	Anolis_carolinensis
ENSOCUG00000001628	-	99	97.476	ENSANAG00000024017	-	100	86.517	Aotus_nancymaae
ENSOCUG00000001628	-	77	96.612	ENSBTAG00000017776	CHD2	99	96.886	Bos_taurus
ENSOCUG00000001628	-	99	97.379	ENSCJAG00000020444	-	100	86.354	Callithrix_jacchus
ENSOCUG00000001628	-	99	97.961	ENSCAFG00000010998	CHD2	100	95.069	Canis_familiaris
ENSOCUG00000001628	-	99	96.383	ENSCHIG00000022261	-	99	84.666	Capra_hircus
ENSOCUG00000001628	-	99	97.282	ENSTSYG00000003272	-	100	86.907	Carlito_syrichta
ENSOCUG00000001628	-	99	96.699	ENSCPOG00000005800	-	100	93.807	Cavia_porcellus
ENSOCUG00000001628	-	99	97.476	ENSCCAG00000035304	-	100	86.572	Cebus_capucinus
ENSOCUG00000001628	-	99	97.670	ENSCATG00000031069	-	100	86.525	Cercocebus_atys
ENSOCUG00000001628	-	99	96.602	ENSCLAG00000016269	-	100	86.088	Chinchilla_lanigera
ENSOCUG00000001628	-	99	97.670	ENSCSAG00000017007	-	100	86.579	Chlorocebus_sabaeus
ENSOCUG00000001628	-	86	89.842	ENSCHOG00000000608	-	81	92.727	Choloepus_hoffmanni
ENSOCUG00000001628	-	78	91.511	ENSCPBG00000018049	-	95	91.439	Chrysemys_picta_bellii
ENSOCUG00000001628	-	79	64.199	ENSCSAVG00000007580	-	93	60.383	Ciona_savignyi
ENSOCUG00000001628	-	99	97.573	ENSCANG00000038126	-	100	86.470	Colobus_angolensis_palliatus
ENSOCUG00000001628	-	99	96.893	ENSCGRG00001006649	Chd2	100	85.862	Cricetulus_griseus_chok1gshd
ENSOCUG00000001628	-	99	96.893	ENSCGRG00000018154	Chd2	100	85.862	Cricetulus_griseus_crigri
ENSOCUG00000001628	-	88	77.338	ENSCSEG00000003646	chd2	92	62.318	Cynoglossus_semilaevis
ENSOCUG00000001628	-	99	70.257	ENSCVAG00000002427	chd2	100	67.315	Cyprinodon_variegatus
ENSOCUG00000001628	-	93	75.361	ENSDARG00000060687	chd2	100	67.795	Danio_rerio
ENSOCUG00000001628	-	99	97.279	ENSDNOG00000009796	-	100	86.532	Dasypus_novemcinctus
ENSOCUG00000001628	-	58	83.094	ENSEBUG00000014994	chd2	83	75.532	Eptatretus_burgeri
ENSOCUG00000001628	-	98	97.822	ENSEASG00005015526	-	99	97.917	Equus_asinus_asinus
ENSOCUG00000001628	-	91	78.243	ENSELUG00000017981	chd2	94	85.185	Esox_lucius
ENSOCUG00000001628	-	99	90.347	ENSFALG00000010369	-	100	80.619	Ficedula_albicollis
ENSOCUG00000001628	-	99	96.893	ENSFDAG00000020651	-	100	86.260	Fukomys_damarensis
ENSOCUG00000001628	-	79	77.479	ENSFHEG00000002119	chd2	94	65.066	Fundulus_heteroclitus
ENSOCUG00000001628	-	99	73.385	ENSGMOG00000002890	chd2	99	66.667	Gadus_morhua
ENSOCUG00000001628	-	99	89.103	ENSGALG00000006949	CHD2	100	79.848	Gallus_gallus
ENSOCUG00000001628	-	93	75.988	ENSGAFG00000001905	chd2	97	64.428	Gambusia_affinis
ENSOCUG00000001628	-	93	75.676	ENSGACG00000013246	chd2	99	66.472	Gasterosteus_aculeatus
ENSOCUG00000001628	-	82	86.631	ENSGAGG00000013176	-	98	91.636	Gopherus_agassizii
ENSOCUG00000001628	-	99	97.476	ENSGGOG00000015677	CHD2	98	87.614	Gorilla_gorilla
ENSOCUG00000001628	-	93	77.858	ENSHBUG00000017947	chd2	100	66.613	Haplochromis_burtoni
ENSOCUG00000001628	-	99	97.184	ENSHGLG00000004435	CHD2	100	84.850	Heterocephalus_glaber_female
ENSOCUG00000001628	-	99	96.884	ENSHGLG00100016376	-	100	84.762	Heterocephalus_glaber_male
ENSOCUG00000001628	-	92	72.765	ENSHCOG00000008855	chd2	98	62.645	Hippocampus_comes
ENSOCUG00000001628	-	98	73.926	ENSIPUG00000000488	chd2	99	64.298	Ictalurus_punctatus
ENSOCUG00000001628	-	99	97.573	ENSSTOG00000001270	-	100	86.961	Ictidomys_tridecemlineatus
ENSOCUG00000001628	-	99	95.918	ENSJJAG00000000213	Chd2	100	85.699	Jaculus_jaculus
ENSOCUG00000001628	-	72	83.062	ENSKMAG00000015849	chd2	99	67.469	Kryptolebias_marmoratus
ENSOCUG00000001628	-	99	96.505	ENSLAFG00000016885	-	99	95.968	Loxodonta_africana
ENSOCUG00000001628	-	99	97.573	ENSMFAG00000033343	-	100	86.525	Macaca_fascicularis
ENSOCUG00000001628	-	99	97.573	ENSMMUG00000011782	-	100	86.525	Macaca_mulatta
ENSOCUG00000001628	-	99	96.899	ENSMNEG00000036875	-	100	86.158	Macaca_nemestrina
ENSOCUG00000001628	-	99	97.670	ENSMLEG00000035026	-	100	86.579	Mandrillus_leucophaeus
ENSOCUG00000001628	-	93	77.574	ENSMAMG00000009082	chd2	100	66.685	Mastacembelus_armatus
ENSOCUG00000001628	-	98	89.282	ENSMGAG00000008966	-	99	79.868	Meleagris_gallopavo
ENSOCUG00000001628	-	98	96.436	ENSMICG00000000332	-	99	86.349	Microcebus_murinus
ENSOCUG00000001628	-	99	96.408	ENSMOCG00000015124	Chd2	100	85.543	Microtus_ochrogaster
ENSOCUG00000001628	-	99	92.093	ENSMODG00000013158	-	100	82.682	Monodelphis_domestica
ENSOCUG00000001628	-	96	64.553	ENSMALG00000007755	chd2	94	68.993	Monopterus_albus
ENSOCUG00000001628	-	99	96.796	MGP_CAROLIEiJ_G0029860	Chd2	100	85.917	Mus_caroli
ENSOCUG00000001628	-	99	96.408	ENSMUSG00000078671	Chd2	100	85.753	Mus_musculus
ENSOCUG00000001628	-	99	96.893	MGP_PahariEiJ_G0013082	Chd2	100	85.816	Mus_pahari
ENSOCUG00000001628	-	99	96.505	MGP_SPRETEiJ_G0030962	Chd2	100	85.862	Mus_spretus
ENSOCUG00000001628	-	99	98.058	ENSMPUG00000017577	-	100	87.118	Mustela_putorius_furo
ENSOCUG00000001628	-	99	94.864	ENSMLUG00000009292	-	100	84.786	Myotis_lucifugus
ENSOCUG00000001628	-	99	96.796	ENSNGAG00000010792	Chd2	100	86.408	Nannospalax_galili
ENSOCUG00000001628	-	93	76.008	ENSNBRG00000020591	chd2	95	69.746	Neolamprologus_brichardi
ENSOCUG00000001628	-	99	97.573	ENSNLEG00000012349	-	100	84.986	Nomascus_leucogenys
ENSOCUG00000001628	-	84	89.848	ENSMEUG00000001522	-	77	86.597	Notamacropus_eugenii
ENSOCUG00000001628	-	99	95.821	ENSODEG00000016028	-	100	85.871	Octodon_degus
ENSOCUG00000001628	-	93	77.755	ENSONIG00000015136	chd2	100	66.685	Oreochromis_niloticus
ENSOCUG00000001628	-	87	85.410	ENSOANG00000004385	-	100	84.891	Ornithorhynchus_anatinus
ENSOCUG00000001628	-	92	77.469	ENSORLG00000008403	chd2	100	66.411	Oryzias_latipes
ENSOCUG00000001628	-	92	77.732	ENSORLG00020004138	chd2	100	66.594	Oryzias_latipes_hni
ENSOCUG00000001628	-	57	67.288	ENSORLG00015017721	chd2	94	65.888	Oryzias_latipes_hsok
ENSOCUG00000001628	-	99	69.573	ENSOMEG00000005831	chd2	100	65.305	Oryzias_melastigma
ENSOCUG00000001628	-	99	93.592	ENSOGAG00000010399	-	100	84.561	Otolemur_garnettii
ENSOCUG00000001628	-	98	97.335	ENSOARG00000010343	-	100	85.106	Ovis_aries
ENSOCUG00000001628	-	99	96.802	ENSPPAG00000030381	-	100	86.386	Pan_paniscus
ENSOCUG00000001628	-	99	97.573	ENSPTRG00000007478	CHD2	100	86.579	Pan_troglodytes
ENSOCUG00000001628	-	99	92.517	ENSPANG00000033355	-	100	83.688	Papio_anubis
ENSOCUG00000001628	-	98	74.975	ENSPKIG00000000495	chd2	100	66.811	Paramormyrops_kingsleyae
ENSOCUG00000001628	-	72	80.212	ENSPMGG00000009941	chd2	99	65.452	Periophthalmus_magnuspinnatus
ENSOCUG00000001628	-	99	96.602	ENSPEMG00000019507	Chd2	100	85.862	Peromyscus_maniculatus_bairdii
ENSOCUG00000001628	-	51	81.784	ENSPMAG00000003871	-	100	82.543	Petromyzon_marinus
ENSOCUG00000001628	-	84	93.333	ENSPCIG00000009417	-	98	88.073	Phascolarctos_cinereus
ENSOCUG00000001628	-	93	77.812	ENSPFOG00000007050	chd2	100	66.956	Poecilia_formosa
ENSOCUG00000001628	-	69	71.827	ENSPFOG00000000291	-	77	73.023	Poecilia_formosa
ENSOCUG00000001628	-	93	78.016	ENSPLAG00000005067	chd2	100	66.775	Poecilia_latipinna
ENSOCUG00000001628	-	93	77.812	ENSPMEG00000019628	chd2	100	66.956	Poecilia_mexicana
ENSOCUG00000001628	-	99	95.243	ENSPPYG00000006799	-	100	85.270	Pongo_abelii
ENSOCUG00000001628	-	99	97.670	ENSPCOG00000028084	-	100	87.016	Propithecus_coquereli
ENSOCUG00000001628	-	91	76.034	ENSPNAG00000016719	chd2	99	65.176	Pygocentrus_nattereri
ENSOCUG00000001628	-	99	96.699	ENSRNOG00000012716	Chd2	100	85.808	Rattus_norvegicus
ENSOCUG00000001628	-	99	97.573	ENSRBIG00000036875	-	100	85.581	Rhinopithecus_bieti
ENSOCUG00000001628	-	99	97.573	ENSRROG00000041087	-	100	86.470	Rhinopithecus_roxellana
ENSOCUG00000001628	-	99	97.670	ENSSBOG00000023754	-	100	86.681	Saimiri_boliviensis_boliviensis
ENSOCUG00000001628	-	99	92.575	ENSSHAG00000012513	-	100	82.845	Sarcophilus_harrisii
ENSOCUG00000001628	-	99	77.033	ENSSFOG00015023759	chd2	100	68.037	Scleropages_formosus
ENSOCUG00000001628	-	92	76.053	ENSSMAG00000001726	chd2	100	65.426	Scophthalmus_maximus
ENSOCUG00000001628	-	93	75.052	ENSSLDG00000001146	chd2	100	65.481	Seriola_lalandi_dorsalis
ENSOCUG00000001628	-	99	90.811	ENSSARG00000014112	-	80	93.333	Sorex_araneus
ENSOCUG00000001628	-	98	84.289	ENSSPUG00000011266	-	99	78.008	Sphenodon_punctatus
ENSOCUG00000001628	-	97	74.483	ENSSPAG00000016452	chd2	95	69.145	Stegastes_partitus
ENSOCUG00000001628	-	99	98.155	ENSSSCG00000002266	-	100	89.094	Sus_scrofa
ENSOCUG00000001628	-	99	89.719	ENSTGUG00000008540	-	100	80.403	Taeniopygia_guttata
ENSOCUG00000001628	-	99	70.487	ENSTRUG00000008842	chd2	87	67.281	Takifugu_rubripes
ENSOCUG00000001628	-	98	74.709	ENSTNIG00000010760	chd2	97	72.068	Tetraodon_nigroviridis
ENSOCUG00000001628	-	93	88.100	ENSTBEG00000017730	-	85	91.189	Tupaia_belangeri
ENSOCUG00000001628	-	90	95.489	ENSTTRG00000000430	-	86	91.818	Tursiops_truncatus
ENSOCUG00000001628	-	99	97.961	ENSUMAG00000000083	-	100	89.088	Ursus_maritimus
ENSOCUG00000001628	-	83	97.653	ENSVPAG00000009645	-	86	97.653	Vicugna_pacos
ENSOCUG00000001628	-	89	80.776	ENSXETG00000024129	chd2	97	80.270	Xenopus_tropicalis
ENSOCUG00000001628	-	93	75.130	ENSXCOG00000020255	chd2	99	65.225	Xiphophorus_couchianus
ENSOCUG00000001628	-	93	78.425	ENSXMAG00000002707	chd2	100	67.045	Xiphophorus_maculatus